ID DQ116883; SV 1; circular; genomic DNA; STD; VRL; 2739 BP. XX AC DQ116883; XX DT 31-JUL-2006 (Rel. 88, Created) DT 31-JUL-2006 (Rel. 88, Last updated, Version 1) XX DE Tomato leaf curl New Delhi virus - [Pakistan:Solanum] clone PT10 segment A, DE complete sequence. XX KW . XX OS Tomato leaf curl New Delhi virus [Pakistan:Solanum:1997] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2739 RA Tsai W.-S., Green S.K., Behjatnia S.A.A., Rezaian A., Iram S., Mansoor; RT ; RL Submitted (04-JUL-2005) to the INSDC. RL Virology, Asian Vegetable Research and Development Center - The World RL Vegetable Center, P.O. Box 42, Shanhua, Taian, Taiwan 741, Republic of RL China XX DR MD5; a5d57c31e3d536565de0039d840c96d0. XX FH Key Location/Qualifiers FH FT source 1..2739 FT /organism="Tomato leaf curl New Delhi virus FT [Pakistan:Solanum:1997]" FT /segment="A" FT /mol_type="genomic DNA" FT /country="Pakistan:Multan" FT /isolation_source="tomato" FT /clone="PT10" FT /db_xref="taxon:407834" FT CDS 41..427 FT /codon_start=1 FT /product="V3" FT /db_xref="UniProtKB/TrEMBL:Q0R4S4" FT /protein_id="ABB52044.1" FT /translation="MKFTLHGLFSAGGPINRLAHQVWIHKHVGSIIARISRKRSWSEVH FT ASCKISPRDRKELFPRHSRLRSCPRSHSCSSGKELWRSDQQISSFQRPHRKYADVSTST FT APMELVQLSPLPASQKQRPGPTGR" FT CDS 120..458 FT /codon_start=1 FT /product="V2" FT /note="precoat protein" FT /db_xref="GOA:Q705I9" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q705I9" FT /protein_id="ABB52046.1" FT /translation="MWDPLLHEFPESVHGLRCMLAVKYLQEIEKNYSPDTVGYDLVRDL FT ILVLRAKNYGEATSRYHHFNARIESTPTSQLRQPLWSSCSCPHCPRHKSKGLDQQADEQ FT KTQNVQNV" FT CDS 280..1050 FT /codon_start=1 FT /product="CP" FT /note="coat protein" FT /db_xref="GOA:Q0R4S2" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q0R4S2" FT /protein_id="ABB52041.1" FT /translation="MAKRPADIIISTPASKVRRRLNFDSPYGARAVVPIARVTKAKAWT FT NRPMNRKPRMYRMYRSPDVPRGCEGPSKVQSFESRHDVSHIGKVMCVSDVTRGTGLTHR FT VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPTGAPQDFGEVFNMFDNEP FT STATVKNMHRDRYQVLRKWHATVTGGTYACKEQALVRKFVRVNNYVVYNQQEAGKYENH FT TENALMLYMACTHASNPVYATLKIRIYFYDSVTN" FT CDS complement(310..672) FT /codon_start=1 FT /product="C5" FT /db_xref="InterPro:IPR013671" FT /db_xref="UniProtKB/TrEMBL:Q0R4S1" FT /protein_id="ABB52045.1" FT /translation="MVFCLDVFIHPYLPQHIDGFHTESLPYAMCESSPSGNITNTHDFA FT NMRDIVPRFKGLHLRRAFTPPWHVGTSIHSVHSGFSVHRPVGPGLCFCDAGNGDNCTSS FT IGAVEVETSAYFRCGR" FT CDS complement(1047..1457) FT /codon_start=1 FT /product="C3" FT /note="replication enhancer protein" FT /db_xref="GOA:Q0R4S0" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q0R4S0" FT /protein_id="ABB52042.1" FT /translation="MIMDSRTGEYITAHRAESGVFIWEVPNPLYFKILKHDSRPFLTNH FT DIIKVQIQFNHNLRKALGLHKCFLTFQIWTGLRPPTGIFLRVFRTQVLRYLNMLGVVGI FT YNVIRAVYHVFDNVLEKTIDVWTSYDIKLHIY" FT CDS complement(1192..1596) FT /codon_start=1 FT /product="C2" FT /note="transcription activator protein" FT /db_xref="GOA:Q0R4R9" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q0R4R9" FT /protein_id="ABB52043.1" FT /translation="MQSSSHSKNHSIPVAKTSLPQKKKKSIRRRRVDLQCGCSYYISIN FT CHDHGFTHRGVHHCASSREWRVYLGGSKSPVFQNTETRQPTIPHQSRHNQSTDTVQPQP FT AESSWTSQVFSNFPNLDGLTPSDWDFLEGF" FT CDS complement(1499..2584) FT /codon_start=1 FT /product="Rep" FT /note="replication-associated protein" FT /db_xref="GOA:Q0R4R8" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q0R4R8" FT /protein_id="ABB52040.1" FT /translation="MASPRHFRVNAKNYFLTYPKCSLTKEEALSQLQTLETPTRKKFIK FT ICRELHEDGSPHIHVLIQFEGKFQCKNNRFFDLVSPSRSAHFHPNIQGAKSASDVKKYI FT DKDGDVLEWGVFQIDGRSARGGQQTANDAYAQAINTGNKDDALKVLKELAPKDFVLQFH FT NLNTNLDRIFQPPSEVYVSPFSISSFDRVPPELVDWVSSNVVCAAARPFRPISIVIEGD FT SRTGKTMWARCLGPHNYLCGHLDLSPKVYSNEAWYNVVDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPVMIKGGIPTIFLCNKGPNSSYKEYLDEEKNAALKQWAIKNAVFITLEEPL FT YSGRENIAPTEEEEEHTQEAS" XX SQ Sequence 2739 BP; 751 A; 587 C; 615 G; 786 T; 0 other; accgaatggc cgcgcaaatt tttaggtggg ccctcaacca atgaaattca cgctacatgg 60 cttatttagt gcggggggac caataaatag acttgctcac caagtttgga tccacaaaca 120 tgtgggatcc attattgcac gaatttccag aaagcgttca tggtctgagg tgcatgctag 180 ctgtaaaata tctccaagag atagaaaaga actattcccc agacacagtc ggctacgatc 240 ttgtccgaga tctcattctt gttcttcggg caaagaacta tggcgaagcg accagcagat 300 atcatcattt caacgcccgc atcgaaagta cgccgacgtc tcaacttcga cagcccctat 360 ggagctcgtg cagttgtccc cattgcccgc gtcacaaaag caaaggcctg gaccaacagg 420 ccgatgaaca gaaaacccag aatgtacaga atgtatagaa gtcccgacgt gccaaggggg 480 tgtgaaggcc cttctaaggt gcagtccttt gaatctaggc acgatgtctc tcatattggc 540 aaagtcatgt gtgttagtga tgttacccga gggactggac tcacacatcg cgtagggaag 600 cgattctgtg tgaaatccgt ctatgtgctg gggaagatat ggatggatga aaacatcaag 660 acaaaaaacc atactaacag tgtcatgttt tttttagttc gtgaccgtcg tcctacagga 720 gctccccagg atttcgggga agtttttaat atgtttgaca atgaaccgag cacagcaact 780 gtgaagaaca tgcatcgtga tcgctatcaa gtcttacgga agtggcatgc gactgtgacg 840 ggaggaacat atgcatgtaa ggagcaagca ttagttagga agtttgttag ggttaataat 900 tatgttgttt ataatcaaca agaggcaggc aagtatgaga atcatactga aaacgcatta 960 atgttgtaca tggcctgtac tcacgcatca aatcctgtat atgctacttt gaaaatccgg 1020 atctatttct atgattcggt cacaaattaa taaatatgga gctttatatc atatgaagtc 1080 catacatcaa tcgttttttc taatacatta tcaaatacat gataaactgc tcttattaca 1140 ttataaattc caactacacc aagcatattt aggtaccgaa ggacctgcgt tctaaaaacc 1200 ctcaagaaaa tcccagtcgg agggcgtaag cccgtccaga tttggaaagt tagaaaacac 1260 ttgtgaagtc caagagcttt ccgcaggttg tggttgaact gtatctgtac tttgattatg 1320 tcgtgattgg tgaggaatgg tcggctgtcg tgtttcagta ttttgaaata caggggattt 1380 ggaacctccc agataaacac gccactctct gctcgatgcg cagtgatgta ctccccggtg 1440 cgtgaatcca tgatcatggc agttgatcga tatgtaatac gaacaaccac actgcagatc 1500 aactcgcctc ctgcgtatgc tcttcttctt cttctgtggg agcgatgttt tcgcgaccgg 1560 aatagagtgg ttcttcgagt gtgatgaaga ctgcattctt gattgcccac tgcttcagtg 1620 ctgcattttt ttcttcgtcc agatattcct tatagctgct gtttggacct ttattgcaca 1680 ggaagatagt gggaatgcca cctttaatca tgactggctt tccgtacttc gtgttgcttt 1740 gccagtcacg ctgggccccc atgaattctt taaagtgctt tagatagtgg ggatcaacgt 1800 catcaacgac gttgtaccag gcctcattgc tatacacttt tgggctcaga tcaagatgtc 1860 cacacaagta attgtggggt cctaagcaac gagcccacat tgttttgcct gttctactat 1920 ccccctctat gactatgctt atgggcctaa aaggccgcgc agcggcacac accacattgg 1980 acgataccca atcgacgagt tctggcggaa ctctgtcgaa ggaagaaatt gaaaatggag 2040 aaacataaac ctcagaagga ggttgaaaaa tgcgatctaa attggtattt aaattgtgaa 2100 actgcagaac aaaatccttt ggggctaatt cctttaatac tttcaacgca tcgtctttat 2160 ttcccgtgtt aatcgcctga gcatatgcat cgtttgccgt ttgttgacca ccacgagcag 2220 atcgtccatc gatctggaaa acaccccatt ctagaacgtc tccgtctttg tcgatgtact 2280 ttttgacgtc cgatgccgat ttagctccct gaatgttcgg atggaaatgt gctgaccgac 2340 ttggggaaac caagtcgaag aatctgttat ttttgcactg gaattttcct tcgaattgga 2400 tgagaacatg gatatgcgga gacccatcct cgtgaagctc tctacagatc ttgatgaatt 2460 tcttcctggt tggggtttct agggtttgca attgggaaag tgcctcttct ttcgttagag 2520 agcactttgg atatgtgagg aaatagtttt ttgcatttac tctaaaatga cgtggcgaag 2580 ccataaaact tgtcgttttg attcggcgtc cctcaactta tctatgtaat tggtgtctgg 2640 agtcctatat ataggtaaga caccatatgg cataattgta attttgaaaa gaaaattact 2700 ttaattcaaa ttccctaaag cggccattcg tataatatt 2739 //