ID DQ113898; SV 1; linear; genomic RNA; STD; VRL; 2969 BP. XX AC DQ113898; XX DT 15-AUG-2005 (Rel. 84, Created) DT 20-SEP-2008 (Rel. 97, Last updated, Version 3) XX DE Adult diarrheal rotavirus strain J19 VP2 gene, complete cds. XX KW . XX OS Adult diarrheal rotavirus strain J19 OC Viruses; Riboviria; Reoviridae; Sedoreovirinae; Rotavirus. XX RN [1] RP 1-2969 RX DOI; 10.1099/vir.0.2008/001933-0. RX PUBMED; 18796732. RA Jiang S., Ji S., Tang Q., Cui X., Yang H., Kan B., Gao S.; RT "Molecular characterization of a novel adult diarrhoea rotavirus strain J19 RT isolated in China and its significance for the evolution and origin of RT group B rotaviruses"; RL J. Gen. Virol. 89(Pt 10):2622-2629(2008). XX RN [2] RP 1-2969 RA Ji S.Z., Jiang S.J., Yang H.Y.; RT "Complete genomic sequence of a novel adult diarrhea rotavirus strain J19 RT related to the evolution and origin of group B rotaviruses"; RL Unpublished. XX RN [3] RP 1-2969 RA Ji S.Z., Jiang S.J., Yang H.Y.; RT ; RL Submitted (30-JUN-2005) to the INSDC. RL Department of Diarrhea Disease, National Institute for Communicable Disease RL Control and Prevention, Chinese Center for Disease Control and Prevention, RL P.O.Box 5, Changping, Beijing 102206, People's Republic of China XX DR MD5; d61e01b1cf4a313876dcc5113548dd94. XX FH Key Location/Qualifiers FH FT source 1..2969 FT /organism="Adult diarrheal rotavirus strain J19" FT /strain="J19" FT /mol_type="genomic RNA" FT /db_xref="taxon:335103" FT CDS 20..2941 FT /codon_start=1 FT /product="VP2" FT /note="inner layer protein" FT /db_xref="GOA:Q45UF9" FT /db_xref="UniProtKB/Swiss-Prot:Q45UF9" FT /protein_id="AAZ03486.1" FT /translation="MEVIEKLETIRETLNDTKDKKDFQKIHDELVQYLDGIDPLTIDDD FT KWNEILKLFKIIIVKLKNSTIKTTSLENELTQHEKKRTVKEVEKVEEDMKVDVANDNSK FT PTLMDKVLQVSSQPNNPYSADVLQIRTILSKTLFVDTDSEAYSLYVPESQKLDVSPITI FT ELTTIEKYQPKVNILKQAVIVPSQNPLLADTYGAPEILFSTDFFDDITSNSSEGLQLYF FT FDKAYKLKKELPNLPFLSSLDKDVNPLNPLNSVCKSFGQEKYYDMVMDRTDRGLDARRA FT AMQFDNVIVDAQNRTVQFNVRMHPFDLQLLRISQQFAEPMQDLAPVVREYMMLGADGYV FT LTQKTRLDRDQQLIANRRSVVFDRMCELSGPLYRSRIVHSMRMMSKLWRTNVFRTSLED FT EITKIYAAAEVSMVSIDATTSALSTINIASAEQTLNALLNMSFFRCELDLIGSQSSFGA FT AMSAMIALMILPTDQENMDDEVFDVLCNLVYNELIAWAADRPVFVRRAGATNAFRQFVN FT AGLNRDITNYMRFVLLRRPWLPLYNSRDVRRNAHVLVPNVDLANINDQVYVAINSFLNG FT IIEASRRNPNPNKTISANSFRKLMKNMRDICVNRLMPVIRLIRYNVERIGMILHMLPYS FT ADIFDINRNLRDERLRIKIPMSGFLSLVMGITKAPDAFDWSQVLNFADDVRKMDYAEAI FT SIEDSASVAIMRNDANRATSKKEIFISEVKPPTPTVASIQKIPSATLTAMFSDRQLINL FT IRDTHSFRVIREIAVALQAAFDNSPTSQHGVGKGAVLHPVPQNFGRSSQFVRRDNILLQ FT RPAGIQQFTIEDLKQGRYFQGLMAQIRARQPIIVNGPIPLRISDAAEIEQVTLAFLTMN FT SPYDAYIDPRDLKQQKLLTDREVDLFIDQNPARPNDEFDNVMARTSVFIIDAPRAIVPI FT NPQRLNFPYHDIMVTDSVTKFIEFTVALTPDLQLFNGLLVFEQ" XX SQ Sequence 2969 BP; 1035 A; 485 C; 534 G; 915 T; 0 other; ggcacttaag cgctgcaaga tggaagtgat tgaaaagctc gagacaatta gagaaacgtt 60 aaatgacaca aaagataaaa aagatttcca aaaaattcat gatgaactag ttcaatatct 120 tgacggtata gatccactga ctatcgatga tgataaatgg aatgaaatcc ttaaactttt 180 taaaattatc atagtaaagt taaaaaactc aacaatcaaa acgacttctc ttgaaaatga 240 gttaacccaa catgagaaaa aaagaacggt taaagaagtg gaaaaagttg aagaagacat 300 gaaggtggat gtggcgaatg ataatagcaa accaactctt atggataaag tattacaggt 360 gtcaagtcag ccaaataatc catattctgc tgatgtatta caaataagaa caattttatc 420 aaaaactttg tttgttgata cggattctga ggcatattca ctatatgttc cagaatctca 480 gaaacttgat gtttcaccaa ttactattga attaactacg attgaaaagt atcaaccaaa 540 ggttaatatt ctcaaacaag cagttatagt cccatcacaa aatccattgc tagcagatac 600 ctatggtgca cctgagatac ttttttctac tgatttcttt gatgatatca cttcaaattc 660 ttcagaagga ttacaattat atttctttga taaggcatac aaattaaaaa aagaattacc 720 aaatctacca tttctttcat cattagataa ggatgttaac ccgcttaatc cacttaattc 780 agtatgtaaa tcatttggac aagaaaagta ttatgatatg gtaatggatc gcaccgatag 840 aggattagat gctagaagag cagcaatgca atttgataat gttatcgttg atgcacaaaa 900 cagaaccgtt caatttaatg ttagaatgca tccatttgat ttacaattgc tacgtatatc 960 tcaacagttc gctgagccaa tgcaagattt ggctccagtt gtaagagagt atatgatgct 1020 aggagccgac ggatatgtgt taacacagaa gacaagattg gatagagatc agcaattaat 1080 agctaacaga agatctgtgg tatttgatag aatgtgtgaa ttgtcagggc ctttatatag 1140 atcacgtatt gttcattcaa tgagaatgat gtcaaaatta tggagaacga atgtctttag 1200 aacttctctt gaagatgaaa taaccaaaat ttacgccgct gctgaggtat ctatggtttc 1260 tattgatgcg actacgtctg cactttccac cattaatatt gcatcagctg aacaaacgct 1320 gaatgcgtta ttaaacatgt ctttttttag atgtgagtta gatttaattg gtagtcagtc 1380 ttcttttgga gctgcaatgt ctgcaatgat tgcactaatg atactcccaa cagatcaaga 1440 aaatatggat gacgaagtgt ttgatgttct atgcaatctt gtttacaatg aattaatagc 1500 atgggctgct gatagacctg ttttcgttag gagagctgga gcaacaaacg catttaggca 1560 atttgttaat gctggattga atcgtgacat cactaattat atgagatttg tattgttaag 1620 aagaccttgg cttccacttt acaactctag agatgtgcgg agaaatgctc acgttctggt 1680 tcctaatgtt gatttagcta atattaatga tcaagtgtac gttgcaatta atagtttcct 1740 gaatggaatt attgaagcat caagaaggaa cccaaatcct aataaaacga tttctgccaa 1800 ttcatttcga aaattaatga aaaacatgag agatatttgt gttaatagat tgatgccagt 1860 tataagatta attagataca acgttgaaag aataggtatg attttgcaca tgttaccata 1920 ttcagcagac atttttgata tcaacagaaa tttgagagat gaacggctta gaattaaaat 1980 tccgatgtct ggctttctgt ccttagttat gggcataacg aaagctcctg atgcttttga 2040 ttggtcacag gttctaaatt ttgctgatga tgtaaggaaa atggattatg ctgaagcaat 2100 ttcaattgaa gattcagcat cagtggctat aatgcggaat gatgctaata gagcaacttc 2160 gaagaaagaa attttcattt cagaagttaa accaccaact ccaactgtag cttcaataca 2220 aaaaattccc tcagcaactt tgactgcaat gttttcagac agacagttaa ttaatttaat 2280 tagagacact cattcattca gagtaattcg tgaaatagct gtagctctcc aagcggcatt 2340 tgataattcc cctacatctc aacatggagt tggtaaaggt gcagtgcttc atccagttcc 2400 acaaaatttt ggcagatctt ctcaattcgt gagaagagat aacatattac tgcaacgtcc 2460 agctggaatt caacaattta caatagaaga cttaaaacaa ggaagatatt ttcaaggtct 2520 tatggcacaa attagagcca gacaaccgat tatagttaat ggccctattc ctttaagaat 2580 ttctgatgcc gctgaaattg aacaagttac attagcattt ctaactatga attcaccata 2640 tgatgcatac attgatccaa gagatttgaa acaacaaaaa cttttgactg atagagaagt 2700 ggatttattt atcgatcaaa atccagctag accaaatgat gaatttgata atgtaatggc 2760 tagaacatca gttttcataa ttgacgcccc tagagctatc gttccaatta atcctcaaag 2820 actaaatttt ccatatcatg atattatggt aactgattct gtgactaagt tcatcgaatt 2880 tacagttgca ctgactccag atctacaatt atttaacggt ttactagtat ttgagcaata 2940 aatcacgatc tagcttattc aatataccc 2969 //