ID DQ108406; SV 1; linear; genomic RNA; STD; VRL; 2487 BP. XX AC DQ108406; XX DT 21-JUL-2005 (Rel. 84, Created) DT 05-AUG-2023 (Rel. 144, Last updated, Version 2) XX DE Rice stripe virus isolate SD-JN2 segment RNA3, complete sequence. XX KW . XX OS Tenuivirus oryzaclavatae OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; OC Ellioviricetes; Bunyavirales; Phenuiviridae; Tenuivirus. XX RN [1] RP 1-2487 RA Zhu C., Wen F.; RT "Cloning of Rice stripe virus RNA3 segment"; RL Unpublished. XX RN [2] RP 1-2487 RA Zhu C., Wen F.; RT ; RL Submitted (27-JUN-2005) to the INSDC. RL College of Life and Science, Shandong Agricultural University, Daizong RL Street No. 61, Taian, Shandong 271018, China XX DR MD5; e9898b6682e5a8ac4cfd5d61750a3e9b. XX FH Key Location/Qualifiers FH FT source 1..2487 FT /organism="Tenuivirus oryzaclavatae" FT /segment="RNA3" FT /host="rice" FT /isolate="SD-JN2" FT /mol_type="genomic RNA" FT /country="China" FT /db_xref="taxon:3052763" FT gene 66..701 FT /gene="NS3" FT CDS 66..701 FT /codon_start=1 FT /gene="NS3" FT /product="putative replication protein" FT /db_xref="InterPro:IPR007974" FT /db_xref="UniProtKB/TrEMBL:O10387" FT /protein_id="AAZ13597.1" FT /translation="MNVFTSSVGSVEFDHPLLLENDLTSLSINCDDVHCSSRALCYIYD FT IHSSRHPSIDEHQFLRLLHGPDDAVTLGSFLKTLIWILSHDKNLPEEYRLPTIMMSSSY FT VKFFTEVKPRPPSTNCWTCRMSKDNLPFTVPSVKGFPPDAELYIVPISDHDGKPVKFDN FT RKTLYRSPSKKRHKYVISSDKPPLSARYVKYVDSSALEPSPGSSPAVL" FT gene complement(1427..2395) FT /gene="CP" FT CDS complement(1427..2395) FT /codon_start=1 FT /gene="CP" FT /product="coat protein" FT /db_xref="GOA:Q8JRD1" FT /db_xref="InterPro:IPR008864" FT /db_xref="InterPro:IPR009522" FT /db_xref="UniProtKB/TrEMBL:Q8JRD1" FT /protein_id="AAZ13598.1" FT /translation="MGTNKPATLADLQKAINDISKDALSYLTAHKADVVTFAGQIEYAG FT YDAATLIGILKDKGGDTLAKDMTMCITMRYVRGTGFVRDVTKKVKVAAGSTEASTLVSR FT YGIVSSVGTNANAITLGRLAQLFPNVSHEVVRQISGVKMAVDSSDLGLTGCDNLLWDYV FT PQYIKLESETAPYCTTHSLSHILFVVHIIHSFQITKKTMPEGKKKERGLTKDIDMMKYT FT TGLLVITCKSKNLADKKKEDGRKKVLDEFITNGKVKTTIFDALAGMSVNTISTYGNQTR FT LYLAQQSKLMKILAENTSKTASEVSGLVKEFFEDEAEGADD" XX SQ Sequence 2487 BP; 756 A; 531 C; 433 G; 767 T; 0 other; acacaaagtc ctgggtaaaa tagttatatt tttactatac aatacaattc cgacatcatc 60 taagtatgaa cgtgttcaca tcgtctgtag gttctgtgga atttgatcat cctctgcttt 120 tggagaatga tctgaccagt ttgagcataa actgtgatga tgtccattgt tcttcaagag 180 ccttatgtta tatatatgac attcattcat ctaggcaccc ttccattgat gagcatcagt 240 ttctgaggct tcttcatggc cctgatgatg ctgtcaccct aggctccttc ttgaaaactt 300 tgatctggat tctgtcccat gataagaatc tcccagaaga gtacagactt cctactataa 360 tgatgtcatc ctcatatgtg aagttcttca ctgaagtgaa gccaagaccc ccatcaacaa 420 attgctggac atgcagaatg tccaaagaca atttgccctt taccgttcct agtgtcaagg 480 gattccctcc agatgcagag ctctacattg tgccaatatc tgaccatgat ggaaagcctg 540 tcaaatttga caataggaag actctatata gatcacctag taagaaaagg cataagtatg 600 tcatttcttc tgataaacca cctcttagtg cacgttatgt taagtacgtt gattctagtg 660 cactagaacc ctcaccaggc agctctccag ctgtgctgta gaaataaaaa gaaaaaaaga 720 aataagaaaa taaacaaatg atcaaaaaaa cacaaaaaaa tcttaaaaat gaaaaacaca 780 aaaaaccaaa aaactaaaaa aaaccaaaaa acatcatgac ctaagaaact tcacaccact 840 ggttgtctag tgggctctag ttggtagaga aagctatgct tttgcctaaa gccatgattg 900 gccaatcctt aaaatgtgct aagcacatta tccgaggatg tctcggatgt ttttttacct 960 aacctaattt ttttgtattt ttatataatt tttttgattt ttttgatttt tttgtatttt 1020 acatacatat ttttgttttt tgattttttt gttttttaat attttttctt ccaattacta 1080 cattactata tttgattatt catatgctta aaatatatag tatgtattat aaaaatagag 1140 caatataata aagctagtat aactacatta caaacatata tctaaatatt tagatagact 1200 tatcaaacta aagactctac tggagagcga gtaataataa tggcaataca tcacacacaa 1260 agcccaaaac cacacagaca aaataactta tggaatataa ttaaaaacta aaatatacac 1320 atataaatat acatattaac ttacacctaa agaaacaaca cactgtttga agacatgcat 1380 cttccaggga gatatgagat cccccacaac tactgacttg ttcagtctag tcatctgcac 1440 cttctgcctc gtcctcgaag aactccttca ccaacccgct gacttcagat gctgtctttg 1500 aagtgttctc agcaaggatc ttcatcagtt tgctctgttg agccaagtac agccttgtct 1560 gattcccata agtgctgatc gtattgacag acataccagc cagcgcatcg aagattgtgg 1620 tcttcacttt cccattggtg atgaattcat ctaagacctt ctttctgcca tcttccttct 1680 tcttgtcagc caggttcttt gacttgcatg tgatgaccag gagaccagtt gtgtacttca 1740 tcatgtctat gtcttttgtc agaccacgct ccttcttctt accctctggc atggtctttt 1800 tggttatctg gaaggagtga atgatgtgca caacaaacaa aatgtgactt agggagtgag 1860 ttgtgcagta aggagctgtt tcactctcca gtttgatata ttgtggaaca tagtcccaca 1920 gtaagttgtc acatcctgtt agtcccaggt cagaagagtc cacagccatc ttaacaccag 1980 agatttgtct cacaacttca tgtgagacat ttgggaatag ctgagccagc cttccaagtg 2040 tgatagcatt ggcattagtt cccaccgagg acactatccc atacctcgac accagggtcg 2100 aagcctctgt gcttccagct gccactttca ctttcttagt gacatctctc acaaagccag 2160 tgcctctcac atatctcatg gtgatgcaca tagtcatatc cttggccagt gtgtcaccac 2220 ctttgtcctt caatatgcca atcagagttg cagcatcata gcctgcatac tctatctgac 2280 cagcaaaggt cacaacatca gctttatgag cagtcaggta agacaacgca tctttggaga 2340 tgtcattgat tgccttctgc aaatcagcta gagtggctgg cttgttggtg cccattgtag 2400 caagaggtac tggaggaatg gttgcggctt agatgaaatt tggaatgtaa aagcaaaatc 2460 gaaaatttta ttacccagac tttgtgt 2487 //