ID DQ102479; SV 1; linear; genomic RNA; STD; VRL; 2351 BP. XX AC DQ102479; XX DT 01-JUL-2007 (Rel. 92, Created) DT 01-JUL-2007 (Rel. 92, Last updated, Version 1) XX DE Turnip mosaic virus isolate CHN 11 polyprotein gene, partial cds. XX KW . XX OS Turnip mosaic virus OC Viruses; Riboviria; Potyviridae; Potyvirus. XX RN [1] RP 1-2351 RA Singh A., Jenner C.E., Nettleship S.B., Foster G.D., Walsh J.A.; RT "Molecular characterization of Turnip mosaic virus"; RL Unpublished. XX RN [2] RP 1-2351 RA Singh A., Jenner C.E., Nettleship S.B., Foster G.D., Walsh J.A.; RT ; RL Submitted (24-JUN-2005) to the INSDC. RL Warwick HRI, University of Warwick, Wellesbourne, Warwick CV35 9EF, UK XX DR MD5; a37e92cb4fa1fcbf8943bcb8ad53e07d. XX FH Key Location/Qualifiers FH FT source 1..2351 FT /organism="Turnip mosaic virus" FT /strain="Tu6" FT /isolate="CHN 11" FT /mol_type="genomic RNA" FT /country="China" FT /db_xref="taxon:12230" FT CDS <1..>2351 FT /codon_start=2 FT /product="polyprotein" FT /db_xref="GOA:A6XAB1" FT /db_xref="InterPro:IPR001650" FT /db_xref="InterPro:IPR011545" FT /db_xref="InterPro:IPR013648" FT /db_xref="InterPro:IPR014001" FT /db_xref="InterPro:IPR027417" FT /db_xref="InterPro:IPR039560" FT /db_xref="UniProtKB/TrEMBL:A6XAB1" FT /protein_id="AAZ94090.1" FT /translation="LERIIAFVALVLMMFDAERSDCVTKILNKLKGLVATVEPTVYHQT FT LNDIEDDLSERNLFVDFELSSDGDMLQQLPAEKTFASWWSHQLSRGFTIPHYRTEGKFM FT TFTRATATEVASKIAHESDRDILLMGAVGSGKSTGLPYHLSRKGNVLLLEPTRPLAENV FT HKQLSQAPFHQNTTLRMRGLTAFGSAPISVMTSGFALNYFANNRMRIEEFDFVIFDECH FT VHDANAMAMRCLLHECDYSGKIIKVSATPPGREVEFSTQYPVSISTEDTLSFQDFVNAQ FT GSGSNCDVISKGDNILVYVASYNEVDALSKLLIERDFKVTKVDGRTMKVGNIEITTSGT FT PNKKHFIVATNIIENGVTLDIDVVADFGTKVLPYLDTDSRMLSTTKTSINYGERIQRLG FT RVGRHKPGHALRIGHTEKGLSEVPSCIATEAALKCFTYGLPVITNNVSTSILGNVTVKQ FT ARTMSVFEITPFYTSQVVRYDGSMHPQVHELLKRFKLRDSEIVLNKLAIPHRGVNAWLT FT ASEYARLGANVEDRRDVRIPFMCRDIPEKLHLDMWDVIVKFKGDAGFGRLSSASASKVA FT YTLQTDVNSIQRTVTIIDTLIAEERRKQEYFKTVTSNCVSSSNFSLQSITNAIKSRMMK FT DHTCENISVLEGAKSQLLEFRNLNADHSFATKTDGISRHFMSEYGALEAVHHQNTSDMS FT KFLKLKGKWNKTLITRDVLVLCGVLGGGLWMVIQHLRSKISEPVTHEAKGKRQRQKLKF FT RNARDNKMGREVYGDDDTIEHFFGDAYTKK" FT mat_peptide <1..133 FT /product="6K1" FT /note="6 kilodalton protein 1" FT mat_peptide 134..2065 FT /product="CI" FT /note="cytoplasmic inclusion protein" FT mat_peptide 2066..2224 FT /product="6K2" FT /note="6 kilodalton protein 2" FT mat_peptide 2225..>2351 FT /product="VPg" FT /note="viral genome-linked protein" XX SQ Sequence 2351 BP; 739 A; 496 C; 560 G; 556 T; 0 other; actcgagcgt ataatagcat ttgttgcatt ggtgctcatg atgtttgacg cggaacgaag 60 cgactgtgtt acaaagattc ttaacaagct taaaggacta gtcgccactg ttgaacctac 120 agtttaccat cagactctca atgatataga ggatgatttg agtgagagga acctcttcgt 180 tgatttcgag cttagcagtg atggcgatat gctccaacag cttccagctg aaaagacatt 240 tgcttcatgg tggagtcatc aactaagcag aggattcaca atcccacact acaggacaga 300 agggaagttc atgactttta ccagagcaac tgccacggaa gtcgcgagta aaatagcaca 360 cgaaagtgac agagacatat tgctaatggg agcagtagga tcaggtaagt caactggctt 420 gccatatcat ctctccagaa aagggaatgt attgctcctt gagccaactc ggccacttgc 480 agaaaacgta cacaagcagt tgtcgcaggc accgttccat cagaacacaa ctcttaggat 540 gcgcggatta acagcattcg ggtcggcgcc aatctcagta atgaccagtg gttttgcact 600 caattacttt gcaaacaaca gaatgcgaat tgaagaattt gactttgtca tatttgatga 660 atgtcacgtt catgacgcca atgcaatggc gatgagatgt ttgctacatg agtgtgacta 720 ttctggcaaa attatcaaag tttcagccac accaccaggt cgagaagttg agttctccac 780 tcaatacccc gtgtcgataa gcacagaaga cacactatcg tttcaggatt ttgtgaacgc 840 acagggtagt ggaagcaatt gtgatgtgat ctcaaaagga gacaatatcc tcgtgtatgt 900 agcaagctac aatgaggtag acgcgctctc aaaacttcta attgaaagag acttcaaagt 960 cacgaaggtt gacggaagaa cgatgaaagt cggaaacatc gagatcacca caagtggaac 1020 acctaacaag aagcacttca tagttgcaac caatatcatt gagaacggtg ttactctaga 1080 catcgatgtg gttgctgatt ttggaacgaa ggtactccca taccttgata cagacagcag 1140 aatgcttagc acaacaaaga caagcatcaa ttatggggag cgtatccaaa gactaggaag 1200 agtcggacga cacaagccag gtcacgccct gcgaataggt cacacagaga aggggttaag 1260 cgaagtccca agttgtattg caacagaagc agctttgaag tgcttcactt atgggcttcc 1320 agtgatcacc aacaacgtct cgacaagcat tcttggtaat gtaacggtaa agcaggcacg 1380 aacaatgtct gtgtttgaga taacaccgtt ctacacaagc caagtggtga gatatgatgg 1440 ctccatgcac ccacaggtgc acgaactttt aaagagattc aaactcagag actctgagat 1500 tgttttgaat aaattagcca tacctcaccg aggagtgaac gcttggctca cagctagtga 1560 gtatgcacga cttggcgcga atgttgaaga taggcgtgac gtgcgaatcc cttttatgtg 1620 tcgcgacatc ccagaaaaac ttcatctaga catgtgggat gtgatcgtca aattcaaagg 1680 tgatgcgggt tttggtcgac tttcaagcgc cagtgcgagc aaggtggctt atactctaca 1740 gacggacgtc aactccatac agcgaacagt cactatcata gatacactaa tcgctgagga 1800 gagaaggaag caggaatact tcaagacggt aacctccaac tgtgtttctt cttcgaactt 1860 ctcactgcag agcataacaa atgcgataaa atctcgtatg atgaaagatc acacgtgtga 1920 gaacatatca gtgcttgaag gagcgaagtc acagttactt gagtttagaa atttgaatgc 1980 tgatcactca tttgccacta aaaccgatgg aatatctcga catttcatga gtgagtatgg 2040 agctcttgag gcagttcacc atcaaaacac cagcgacatg agcaaattcc tcaagcttaa 2100 gggcaaatgg aacaaaacgc taatcacgcg agatgtgttg gtgctttgtg gagttcttgg 2160 aggtggattg tggatggtta ttcagcacct gcggtcaaag atctccgaac ccgtaaccca 2220 cgaagcgaaa ggcaagaggc aaagacagaa actaaagttt cgcaatgccc gagacaacaa 2280 gatgggtaga gaagtgtacg gagatgatga caccatagag catttctttg gtgatgccta 2340 cacaaagaaa g 2351 //