ID DQ102381; SV 1; linear; genomic RNA; STD; VRL; 3088 BP. XX AC DQ102381; XX DT 28-JUL-2005 (Rel. 84, Created) DT 19-NOV-2010 (Rel. 106, Last updated, Version 2) XX DE Potato mop-top virus isolate Korneta-Nemilkov coat protein (cp) gene, DE complete cds. XX KW . XX OS Potato mop-top virus OC Viruses; Riboviria; Virgaviridae; Pomovirus. XX RN [1] RP 1-3088 RX DOI; 10.1007/BF02932139. RX PUBMED; 17571797. RA Cerovska N., Pecenkova T., Filigarova M., Dedic P.; RT "Sequence analysis of the Czech potato mop-top virus (PMTV) isolate RT Korneta-Nemilkov"; RL Folia Microbiol. (Praha) 52(1):61-64(2007). XX RN [2] RP 1-3088 RA Cerovska N., Pecenkova T.; RT "Nucleotide sequence of RNA 2 from Czech isolate Korneta-Nemilkov of PMTV"; RL Unpublished. XX RN [3] RP 1-3088 RA Cerovska N., Pecenkova T.; RT ; RL Submitted (23-JUN-2005) to the INSDC. RL Virology, Institute of Experimental Botany, Czech Academy of Sciences, Na RL Karlovce 1a, Prague 6 16000, Czech Republic XX DR MD5; 6048c6daa367af205897135dde54f054. DR EuropePMC; PMC5446823; 28611505. DR RFAM; RF00233; Tymo_tRNA-like. XX FH Key Location/Qualifiers FH FT source 1..3088 FT /organism="Potato mop-top virus" FT /segment="RNA 2" FT /lab_host="Nicotiana benthamiana" FT /isolate="Korneta-Nemilkov" FT /mol_type="genomic RNA" FT /country="Czech Republic" FT /db_xref="taxon:37128" FT gene 268..798 FT /gene="cp" FT CDS 268..798 FT /codon_start=1 FT /gene="cp" FT /product="coat protein" FT /db_xref="GOA:Q76XN1" FT /db_xref="InterPro:IPR001337" FT /db_xref="UniProtKB/TrEMBL:Q76XN1" FT /protein_id="AAZ17509.1" FT /translation="MAENRGERRAAVENRYDAWDHEQAMKAAVRKFISYDQFSAQLRNW FT REARLNIIEHATSVLSQVSNLGRTHFYSRTERFGGSSLVGDKLYVCLNETRMKTALNNI FT IVALQTVNGEGRARRLGPREASANTGGEDSALNVAHQLAEVDDLLTDESFLREAVFTQD FT KYELVNGLRWAGA" XX SQ Sequence 3088 BP; 822 A; 565 C; 865 G; 836 T; 0 other; tatcaacttt cttgcagagc ttttagtaat acgaccaggt gttggttgct attaagagct 60 gcattaaagt gttttcttgt gtcttttgcg ggtgggctac aggtgagcag tccgtataaa 120 ggtatctgaa agcgacggcg atcacaaagg cgcgagtgga aattcttttg tgttagcggt 180 ttgaaaattt tattttctta ctgagtttgt tgttctataa ttctcggaga tctggaatca 240 gaggaggttt gtttaccacc cttggaaatg gctgaaaaca gaggtgagcg aagagcagcc 300 gtcgagaata gatatgacgc ttgggaccat gagcaggcca tgaaggctgc cgtgaggaag 360 tttatttctt acgatcaatt ctcagctcag ttaagaaact ggcgcgaagc taggttaaac 420 ataattgaac atgccactag cgtgttgagc caggtgtcta atttaggtag aactcatttc 480 tacagtagaa ccgaacgctt tggtggaagt tcacttgttg gtgataaatt gtacgtatgt 540 ctgaatgaaa ccagaatgaa aaccgcgttg aataatataa ttgtagcgtt gcagacagtg 600 aacggcgaag ggcgggcaag acgattaggt ccgagagaag cttccgcgaa caccggcggg 660 gaggatagcg ctctgaatgt ggcacatcaa ctcgcagagg tggacgattt attaactgat 720 gaaagttttt tgagagaagc tgtttttact caggacaaat atgagctcgt gaacgggtta 780 cgctgggctg gtgcatagca attaaccgct caggcttttt ggtttgacgt caacgccgct 840 atcgacgaaa ttgataatcg actgctagcg gcggctgcgt taagactatt gcctgggcag 900 gcaaatcacg tggatggtct agtgtctata aattacgcac aattggatag agcattgagt 960 gttgttggtg ggaatatttt acctcagacg ttggagataa ctcgtgacga aagaaaaagg 1020 caattacctg aggtcagagt tatcgacggc gagcgtgtca ctattcgtaa caaagatgag 1080 gcaacggtca ttagaaatca tggtcaggga cttccttggc tattagcgtt tttactgttg 1140 ttgttatctg ttgtggtggt gtattctaca atatacctga acgactggtt gtatcggtta 1200 agtgtggtaa ggcatgggaa acctggcggt ggtgcagctc gtaagctgtc gggtatgtcg 1260 gactggttgt gcagtcgctt aagggccaga ggcgctttga atgtgaatag gatgaggaag 1320 aaacaagcat gcgatccgtc gcccactggg ttgcggaagt tccttacttg ttataacttt 1380 tcttatgaac tttgggatcc tactggtagt tatgacgatg cgcagcggag aattatagcg 1440 gaacagaact cgtttgtgga agccgtgagg gccatagatg agggtgacag ggagttggct 1500 gaggcgtgtt tgactaatgt tagacggatc ctcaggaggc atcttaatta ccgacctgat 1560 tattttgata ttattgaagc gaaggcggta tatttggtga cagtgctgac aaacgcaatg 1620 tcggggccag ttgttggcgt tgacgatgac gagcggagag cggtggtagc cgcgtttaat 1680 ccgtcagact gtgggttacc gaatttggat agttgctctt tggacgaaat caagaatttt 1740 gatttgtccg aagtggtgat cggtgagggt accaatgttg aacaagcaag agggtatctt 1800 aatctttgta gaaatattca gtgtatgatt gagacaattg gcaccgttca atttcttggt 1860 gtgttgtcgt cgtatacagg tcctcagtat ccttgtatat cccaagcttt tgctgaggat 1920 aagaggataa gaaaagaaag gctgaaagat aaggacaata taacgacagc ggatattatt 1980 gcctatttgg tgagtggggt aatggcagcc tacgctcttg tggcagtaag taaaggaggg 2040 atcacactgt ttaagtttat gaagaactat gcgggtggag gtggtgacgg gcctggttca 2100 agcagaagaa taagacaatt agaggccgct ttaccctccc ttccgcagcc agaagaactg 2160 accatgatgg aacgtttgag aagacttcaa tcttccgata acgatttagc tttgagaagg 2220 aacccgtccg atatgcttag tcaggtcgta cgtgacgttg tagccgatgt agactccagc 2280 gatatcgctg agtttttgaa tgatcctgct aggatgaccg aagcggctct ggagatccga 2340 ttgaccagaa taatgagtgc tgaaggttca ccggtggatg taattgagcc agggggccag 2400 gaacttattt ccatgcaagt gcatggagaa agtctaaccg tcataaatgc cggcaccgac 2460 tctcccacag tgatcagatc cgcgtccttg tcgacgcggc accgtagttc tggtatagaa 2520 atcggttctt ttgcagtgga taaagtgctg ccttacgagg tggaaggcga aaacgacgat 2580 catggtgacg ccggtaagaa gcccactgtc gcccaagctt tgatgattgg gggtggtgcg 2640 gttaagggac agggtaattt gggtgttact aatggcaaag aactcttgaa ggtattaggt 2700 agctctcgat ctatagggaa gatgtcaggt aagatggctg tttaaaccga gtgcgtgtga 2760 cgggtttacc tctctaaaag tcacaccgtg gatactacga caagtatcag tgcttacagg 2820 acttatgtct gtggttcact taaatcgaac cattggagca atccaacgtt aatactacgt 2880 taagtattag tgcttacagg gctaaaccgt ggatcacttt aatcgaacca gtctcgaaag 2940 ggacaaaact gactttctag ctgtttttga gataattcca aaaaactcat tatccggctt 3000 agggaagagc ggccagttgc tgctgcgatc aagacacgat cgttcaaaag ggtgcaactc 3060 cccccccctt ggagggtatc caagacca 3088 //