ID   DQ093961; SV 2; linear; genomic RNA; STD; VRL; 1734 BP.
XX
AC   DQ093961;
XX
DT   16-JUL-2005 (Rel. 84, Created)
DT   13-FEB-2008 (Rel. 94, Last updated, Version 6)
XX
DE   Fragaria chiloensis cryptic virus segment RNA 1, complete sequence.
XX
KW   .
XX
OS   Fragaria chiloensis cryptic virus
OC   Viruses; Riboviria; Partitiviridae; unclassified Partitiviridae.
XX
RN   [1]
RP   1-1734
RX   DOI; 10.1094/PD-89-1241B.
RX   AGRICOLA; IND43786311.
RA   Tzanetakis I.E., Martin R.R.;
RT   "Fragaria chiloensis cryptic virus: a new strawberry virus found in
RT   Fragaria chiloensis plants from Chile";
RL   Plant Dis. 89(11):1241-1241(2005).
XX
RN   [2]
RP   1-1734
RX   DOI; 10.1007/s11262-007-0186-9.
RX   PUBMED; 18157739.
RA   Tzanetakis I.E., Price R., Martin R.R.;
RT   "Nucleotide sequence of the tripartite Fragaria chiloensis cryptic virus
RT   and presence of the virus in the Americas";
RL   Virus Genes 36(1):267-272(2008).
XX
RN   [3]
RP   1-1734
RA   Tzanetakis I.E.;
RT   ;
RL   Submitted (15-JUN-2005) to the INSDC.
RL   Dept. of Botany and Plant Pathology, Oregon State University and USDA-ARS,
RL   3420 Orchard Ave, Corvallis, OR 97330, USA
XX
RN   [4]
RC   Sequence update by submitter
RP   1-1734
RA   Tzanetakis I.E.;
RT   ;
RL   Submitted (13-NOV-2006) to the INSDC.
RL   Dept. of Botany and Plant Pathology, Oregon State University and USDA-ARS,
RL   3420 Orchard Ave, Corvallis, OR 97330, USA
XX
DR   MD5; a24e3491c357aaee7359ed0db8f01b88.
XX
CC   On Nov 13, 2006 this sequence version replaced gi:70671517.
CC   GenBank Accession Numbers DQ093961, DQ355439, and DQ355440
CC   represent the complete genome of Fragaria chiloensis cryptic virus.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1734
FT                   /organism="Fragaria chiloensis cryptic virus"
FT                   /segment="RNA 1"
FT                   /isolate="NCGR CFRA 9089"
FT                   /mol_type="genomic RNA"
FT                   /country="Chile"
FT                   /db_xref="taxon:335204"
FT   CDS             183..1622
FT                   /codon_start=1
FT                   /product="RNA-dependent RNA polymerase"
FT                   /db_xref="GOA:Q4FCM7"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:Q4FCM7"
FT                   /protein_id="AAZ06131.2"
FT                   /translation="MEHRFRGIPRGLIELEEIPTRRLREERVVHIDAWSSKAIDAIVPL
FT                   SLRIELDGWARSYYTLQAHIDSIMQYDRPKLPQPTNAAWNTTTQHVRTQFARMDKVQTL
FT                   SYLQLDQVKWVRSSAAGYGYVGRKSDNDNYFRARKTAFTIAEKLNHDRDYGPLALEDST
FT                   PDIAFTRTQLCQIKVKRKIRNVWGEAFHYVLLEGLFADPIIQHFIRNKSFYFIGEDPLL
FT                   AVPRLVEKILSEQDYVYMFDWSGFDASVQEWEIRFAFSLLESILIFPSSVESYIWHFII
FT                   ELFIYRKIAAPNGKVYLKTLGIPSGSCFTNIIGSIVNYVRIQYLFFRLTNNFVTVFTHG
FT                   DDSLVGVSTTQYVQMDNFEPICAEHNWTINIAKSAVSHEAEGVSFLSRKVREHCHARDE
FT                   LLCLRMLKFPEYVVESGAMSTLRAHSIHQDAGINSRYLYSIYKYLLHRYGKADSLPLNQ
FT                   QNWDPLEYENLRVSFATQNYE"
XX
SQ   Sequence 1734 BP; 496 A; 408 C; 335 G; 495 T; 0 other;
     gataatgatc aaccgaaaag gttgattttc attatctaga agtaaatttt ctattgtaaa        60
     ttttcattat gaaattaaca ttagaagtta cttctacaca ctaccgtgta tagcgagttt       120
     ataagatttc aaattttaga gttatctaat tgtttactat cttacatccg ttatatacag       180
     gtatggagca tcgctttcgt ggaatccctc gtggtcttat agaactcgaa gaaatcccga       240
     cgcgacgctt acgcgaggag cgcgttgtac atatagacgc ctggagctca aaagctatag       300
     acgccatcgt accgctctca cttcgcatcg aactagatgg ctgggcccga agttattata       360
     cacttcaagc gcacattgat tcaatcatgc aatatgatcg tccaaagctg ccgcaaccca       420
     ccaatgctgc gtggaacacc accacacaac acgtccgaac acagttcgca cggatggata       480
     aagtacagac tctgtcttac ttacaacttg accaagttaa atgggtcaga tcctccgccg       540
     ctggttatgg ttacgttggt cgcaaaagcg ataatgataa ctattttaga gctcgaaaga       600
     ctgctttcac tatagcagaa aagctcaacc acgatcgcga ctacggtccg ctagctctcg       660
     aagactctac acctgacata gcgttcacac gaacacaact atgccaaatc aaggtgaaga       720
     gaaagattag gaatgtttgg ggagaggcgt ttcattacgt cctacttgaa ggtctgttcg       780
     cagatcccat tattcagcac tttatacgga acaagtcgtt ctactttatt ggagaagacc       840
     cgctgcttgc tgtcccccgc ctagtcgaga agatattatc agaacaagac tacgtctaca       900
     tgtttgactg gtctggtttc gatgcctcag tacaagaatg ggaaattcgt tttgcctttt       960
     cgttacttga gagtatcctg atctttccct caagtgtcga atcttacatt tggcatttca      1020
     ttattgagct gttcatctac cgcaagatag ccgcacccaa tggcaaggta taccttaaaa      1080
     ctttaggaat accatctggt agctgtttca cgaacattat tggaagtatc gttaactacg      1140
     ttcgcatcca gtatctgttc ttccgactca ccaacaactt cgtaactgtt ttcacacacg      1200
     gtgacgatag cctggtcgga gtatcaacta ctcaatacgt tcagatggac aattttgaac      1260
     ccatctgtgc tgaacacaat tggacgatta acatcgccaa atctgctgtc tcgcatgaag      1320
     ctgaaggggt atccttctta agccgaaaag tccgtgagca ctgccatgcc cgtgacgaat      1380
     tactctgcct tcgaatgctc aaatttccag aatacgtcgt agaatctggc gcaatgtcaa      1440
     ctttgcgtgc acattccatt caccaagacg ctggaatcaa ttcccgttac ttgtattcaa      1500
     tatacaaata ccttttacac aggtacggaa aagctgactc cctgcctctg aaccaacaga      1560
     actgggaccc tctagagtac gagaacctac gtgtttcttt tgctactcaa aactatgaat      1620
     aatgtaatga tgtttatcaa tacactgttt gttgtcaacc aaccgaatat tttatgtatt      1680
     taaatttaca tagaatgtgg gttaggagcc tgatcactcc taacccctct gatc            1734
//