ID DQ079909; SV 1; circular; genomic DNA; STD; PHG; 5486 BP.
XX
AC DQ079909;
XX
DT 25-JAN-2006 (Rel. 86, Created)
DT 28-FEB-2006 (Rel. 87, Last updated, Version 2)
XX
DE Coliphage WA14, complete genome.
XX
KW .
XX
OS Enterobacteria phage WA14
OC Viruses; Microviridae; Bullavirinae; Gequatrovirus.
XX
RN [1]
RP 1-5486
RX DOI; 10.1128/JB.188.3.1134-1142.2006.
RX PUBMED; 16428417.
RA Rokyta D.R., Burch C.L., Caudle S.B., Wichman H.A.;
RT "Horizontal gene transfer and the evolution of microvirid coliphage
RT genomes";
RL J. Bacteriol. 188(3):1134-1142(2006).
XX
RN [2]
RP 1-5486
RA Rokyta D.R., Burch C.L., Caudle S.B., Wichman H.A.;
RT ;
RL Submitted (31-MAY-2005) to the INSDC.
RL Biological Sciences, University of Idaho, PO Box 443051, Moscow, ID
RL 83844-3051, USA
XX
DR MD5; 8c429512cb4416cd8eb7e485c5bf8d0b.
DR EuropePMC; PMC1347346; 16428417.
DR EuropePMC; PMC1456406; 16361237.
DR EuropePMC; PMC5974221; 29844443.
DR EuropePMC; PMC6316680; 30373114.
XX
FH Key Location/Qualifiers
FH
FT source 1..5486
FT /organism="Enterobacteria phage WA14"
FT /mol_type="genomic DNA"
FT /db_xref="taxon:338140"
FT gene 59..1729
FT /gene="A"
FT CDS 59..1729
FT /codon_start=1
FT /transl_table=11
FT /gene="A"
FT /product="gpA"
FT /note="Rf replication; viral strand synthesis"
FT /db_xref="GOA:Q2LL52"
FT /db_xref="InterPro:IPR008766"
FT /db_xref="UniProtKB/TrEMBL:Q2LL52"
FT /protein_id="AAZ49379.1"
FT /translation="MQQHLTASDFYRKPIIDAIKPLVETAGMSVLTQSPNLRIWKQCNT
FT RVKLLEEILNHYTNGIRRDDNGDFFLNPECQLATTIAYRAHKKGYNPRFKQYPESFTLD
FT DIITGKPIPQTAPSELQLTDEIGEDYRLTVLSIIEELDECYNVLGQLDINNTIDHKPIG
FT NAKWDLMYEKPVYKHWYELVSKRPLKSIREDYNYAKAKGTKDECSKILEESTMKSRRGF
FT TVQRLMNAMRTAHTDGWYVVFDTLTLADDRIKDFYANPNALRDYFRDIGRMVLTAEGRS
FT VHDSSSDCYQYFCVPEYGTQHGRLHFHAVHLMRTLPLGSLDPNFGKLVRTNRQINSLQN
FT TWPYGYSMPIAVRYSQDAFSRAGWLWPVDTKGEPLKSTSYMAVGFYVAKYVNKKSDVDI
FT AAKGLGNQKWNATLKTQMALLPKKLFRIRMSRNFGMKLLPMTTLTAECLIQLTQVGYDV
FT TPFNNILKQNAKKELRLRLAKQSVADVLEAQPVTTNLLKFMRNLTRKIGASSLQSFIAS
FT MTQKLASTDISDETKNYVTNAGIAVADLRLKSKWTAGGK"
FT gene 704..1729
FT /gene="A*"
FT CDS 704..1729
FT /codon_start=1
FT /transl_table=11
FT /gene="A*"
FT /product="gpA*"
FT /function="shuts off host DNA synthesis"
FT /db_xref="GOA:Q2LL51"
FT /db_xref="InterPro:IPR008766"
FT /db_xref="UniProtKB/TrEMBL:Q2LL51"
FT /protein_id="AAZ49380.1"
FT /translation="MKSRRGFTVQRLMNAMRTAHTDGWYVVFDTLTLADDRIKDFYANP
FT NALRDYFRDIGRMVLTAEGRSVHDSSSDCYQYFCVPEYGTQHGRLHFHAVHLMRTLPLG
FT SLDPNFGKLVRTNRQINSLQNTWPYGYSMPIAVRYSQDAFSRAGWLWPVDTKGEPLKST
FT SYMAVGFYVAKYVNKKSDVDIAAKGLGNQKWNATLKTQMALLPKKLFRIRMSRNFGMKL
FT LPMTTLTAECLIQLTQVGYDVTPFNNILKQNAKKELRLRLAKQSVADVLEAQPVTTNLL
FT KFMRNLTRKIGASSLQSFIASMTQKLASTDISDETKNYVTNAGIAVADLRLKSKWTAGG
FT K"
FT gene 1282..1644
FT /gene="B"
FT CDS 1282..1644
FT /codon_start=1
FT /transl_table=11
FT /gene="B"
FT /product="gpB"
FT /note="capsid morphogenesis"
FT /db_xref="GOA:Q2LL50"
FT /db_xref="InterPro:IPR003513"
FT /db_xref="InterPro:IPR038149"
FT /db_xref="UniProtKB/TrEMBL:Q2LL50"
FT /protein_id="AAZ49381.1"
FT /translation="MERYIKNADGSFTKETIPNPNEPQLRDETTPNDDAHRGVLNPTDP
FT SGLRRDPVQQHLEAERQERATIEAGKAICSRRFGGATCDDQSAKIHAQFDPQNRSVQPT
FT EFYRFNDAEISKYGYF"
FT gene 1644..1814
FT /gene="K"
FT CDS 1644..1814
FT /codon_start=1
FT /transl_table=11
FT /gene="K"
FT /product="gpK"
FT /db_xref="InterPro:IPR020962"
FT /db_xref="UniProtKB/TrEMBL:Q2LL49"
FT /protein_id="AAZ49382.1"
FT /translation="MKPKTTLLMQELLLLTYDLNRSGLLVENEELQSQLKELEGVLLRN
FT LSPSSKRGGKD"
FT gene 1726..1995
FT /gene="C"
FT CDS 1726..1995
FT /codon_start=1
FT /transl_table=11
FT /gene="C"
FT /product="gpC"
FT /note="DNA maturation"
FT /db_xref="GOA:Q2LL48"
FT /db_xref="InterPro:IPR016407"
FT /db_xref="UniProtKB/TrEMBL:Q2LL48"
FT /protein_id="AAZ49383.1"
FT /translation="MKNFNLNLKNSRASYFATFRHHLNVVAKTDALDEEKWLNMMGALL
FT KDWFRYEQHFVHGKESMLDILNERGLLSTLPNGLTYKGIKNESK"
FT gene 1982..2443
FT /gene="D"
FT CDS 1982..2443
FT /codon_start=1
FT /transl_table=11
FT /gene="D"
FT /product="gpD"
FT /note="capsid morphogenesis"
FT /db_xref="GOA:Q2LL47"
FT /db_xref="InterPro:IPR004196"
FT /db_xref="InterPro:IPR036632"
FT /db_xref="UniProtKB/TrEMBL:Q2LL47"
FT /protein_id="AAZ49384.1"
FT /translation="MKANENAVAFQTAIASIKLIQASSVLDLTEDDFEFLTRDRVWIAT
FT DRSRARRAIEACVYGTLDFVGYPRFPAPIEFIAAVIAYYVHPVNIQTACLIMEGAEFTE
FT NIINGVDAPVKAAELFAFTLRVRAGNTELITYAENNAREKLRAQGVMDV"
FT gene 2157..2432
FT /gene="E"
FT CDS 2157..2432
FT /codon_start=1
FT /transl_table=11
FT /gene="E"
FT /product="gpE"
FT /note="cell lysis protein"
FT /db_xref="GOA:Q2LL46"
FT /db_xref="InterPro:IPR007605"
FT /db_xref="UniProtKB/TrEMBL:Q2LL46"
FT /protein_id="AAZ49385.1"
FT /translation="MEHWTLSAILAFLLLLSLLLPSLLIMFIPLTFKRHVLLWKALNSP
FT KTSLMVSMPRLKPLNSSRLPCVYAPETLNLLLTQKTTHVKNYVLKE"
FT gene 2436..2516
FT /gene="J"
FT CDS 2436..2516
FT /codon_start=1
FT /transl_table=11
FT /gene="J"
FT /product="gpJ"
FT /note="core protein; DNA condensation"
FT /db_xref="GOA:Q2LL45"
FT /db_xref="InterPro:IPR006815"
FT /db_xref="UniProtKB/TrEMBL:Q2LL45"
FT /protein_id="AAZ49386.1"
FT /translation="MSKKSIRRSGGKSKGARLWYVGGTQF"
FT gene 2556..3836
FT /gene="F"
FT CDS 2556..3836
FT /codon_start=1
FT /transl_table=11
FT /gene="F"
FT /product="gpF"
FT /note="major coat protein"
FT /db_xref="GOA:Q2LL44"
FT /db_xref="InterPro:IPR003514"
FT /db_xref="InterPro:IPR016184"
FT /db_xref="InterPro:IPR037002"
FT /db_xref="UniProtKB/TrEMBL:Q2LL44"
FT /protein_id="AAZ49387.1"
FT /translation="MSNVQTSAERIPHDLSHLVFEAGKIGRLKTISWTPVVAGDSYETE
FT MVGAIRLSPLRRGLAVDSRVDVFTFYIPHRHVYGQQWIDFMKTGVNATPLAPVTCSSGW
FT DSAAYLGTIPSTNLKVPKFLHQSYLNIYNNYFKPPWSNDLTYANPSNMPAEDYKWGVRV
FT ANLKSIWTAPLPPDSLTKQDMTTGATTIDIMGLQAAYAKLHTEQERDYFMTRYRDIMKD
FT FGGHTSYDGDNRPLLLMRSEFWASGYDVDGTDQTSLGQFSGRVQQTFNHKVPRFYVPEH
FT GVIMTLSVTRFPPTHEMEMHYLVGKESLTYTDIACDPALMANLPPREIEVKDLFHSAGT
FT GKFKIAEGQWYRTQPDRVAFPYNALDGFPFYSELPSNDILERVLVRTDNYDEIFQSMQL
FT AHWNMQTKFNTTVYRHMPTTRDGIMTS"
FT gene 3929..4462
FT /gene="G"
FT CDS 3929..4462
FT /codon_start=1
FT /transl_table=11
FT /gene="G"
FT /product="gpG"
FT /note="major spike protein"
FT /db_xref="GOA:Q2LL43"
FT /db_xref="InterPro:IPR003515"
FT /db_xref="InterPro:IPR016184"
FT /db_xref="InterPro:IPR029053"
FT /db_xref="UniProtKB/TrEMBL:Q2LL43"
FT /protein_id="AAZ49388.1"
FT /translation="MFQTYLSKHNSPLTSQSITATKTPAAAAPIISTPELSRSTIFAGL
FT TLTAATTHSGVAHVVRIDETNPTDNQVLSVAASLSGVPSDAIAIAIRFEVADGTVPTAL
FT PALYSAYPVEFFTSGAALSCKDAVSIPTHPVTAGNDVYAGILIWSKSWAAGVVSGLLSV
FT NQVNRETTVLQPLK"
FT gene 4473..5486
FT /gene="H"
FT CDS 4473..5486
FT /codon_start=1
FT /transl_table=11
FT /gene="H"
FT /product="gpH"
FT /note="minor spike protein"
FT /db_xref="GOA:Q2LL42"
FT /db_xref="InterPro:IPR006777"
FT /db_xref="UniProtKB/TrEMBL:Q2LL42"
FT /protein_id="AAZ49389.1"
FT /translation="MFGAIAGGIASSLAGGLLNKAFGGGSSAPQSGVQGNVLATDNNVI
FT GANDAGIKSAIQGSNPPNGQQAAPNAISGVLADTGKDALSSITGAGVNKLMEKVGLSKD
FT AAAKGKDTKDYLASAFPELNPWERAGAGASSAGMVDAGFQNQKELTRMQLDNQKEIAKM
FT QNDTQKDIAGIQSLTSRQNTKDSVYAQNEMLQYNQKESMSRVGAILENTSLTKQQQTSE
FT IMRQMLTQAQTAGQHFTNDQIQELTRKVGADIDAVRANTERTHVETDRSKQEVQNSRYA
FT SSQVGKTAKDVSNVISDASSGIVDYFRGVDKAVADTWNNYFKDGKSDGISSNHRTK"
XX
SQ Sequence 5486 BP; 1463 A; 1378 C; 1095 G; 1550 T; 0 other;
tgcttgacta actatccctt cacttaacat gcctccaaac caacggaggc ttttctacat 60
gcaacaacac ttaaccgctt cggacttcta ccgcaaacca ataatcgacg ctatcaaacc 120
tcttgtcgaa actgctggga tgtctgtgct tactcaatct cctaacctcc gtatctggaa 180
acagtgcaat actcgcgtaa aactgctgga agaaattcta aatcactaca ctaacggtat 240
tcgccgtgat gataatggtg acttctttct caaccctgaa tgtcaactcg ctactacaat 300
tgcttatcgt gctcacaaaa agggctataa ccctcgcttt aaacaatacc ctgaatcgtt 360
cactctggac gatattatta ctggcaagcc aatccctcag actgctcctt ctgaacttca 420
acttactgat gaaatcggtg aggattaccg ccttactgta ctctccataa tcgaagagtt 480
agacgaatgc tacaacgtgc tcggacaact tgatattaat aacactatag accacaaacc 540
tatcggtaac gccaaatggg acttaatgta tgaaaaacct gtctataaac actggtatga 600
actggtatca aaacgacccc ttaaatcaat cagagaggac tacaactatg caaaggctaa 660
gggtactaaa gatgagtgct cgaaaatcct tgaggaatcc accatgaaat cccggcgcgg 720
ctttactgta caaagattaa tgaatgctat gcgcaccgct cacactgatg gatggtacgt 780
tgtattcgat actcttacct tagctgatga ccgtattaag gacttctatg ctaaccccaa 840
tgctcttcgt gactatttcc gtgatattgg tcgtatggtc ctcactgccg agggtcgttc 900
ggtccatgat tcatcttcgg actgctatca atacttttgt gtgcctgagt atggcaccca 960
gcatggccgt ttacactttc acgcagtgca tcttatgcgc acacttcctt tgggttctct 1020
cgaccctaac tttggtaagc tggtgcgtac taatcggcaa ataaatagct tgcaaaacac 1080
atggccttat ggttactcta tgcccatcgc agtccggtac tctcaagatg ctttctctcg 1140
cgctggatgg ctctggcctg ttgatacaaa gggtgaaccc cttaaatcca cctcgtatat 1200
ggctgtaggc ttctacgttg ctaaatacgt taataaaaaa tctgatgttg acatagccgc 1260
aaaaggctta gggaatcaaa aatggaacgc tacattaaaa acgcagatgg ctcttttacc 1320
aaagaaacta ttccgaatcc gaatgagccg caacttcggg atgaaactac tcccaatgac 1380
gacgctcacc gcggagtgct taatccaact gacccaagtg ggttacgacg tgaccccgtt 1440
caacaacatc ttgaagcaga acgccaagaa agagctacga ttgaggctgg caaagcaatc 1500
tgtagccgac gttttggagg cgcaacctgt gacgaccaat ctgctaaaat tcatgcgcaa 1560
tttgacccgc aaaataggag cgtccagcct acagagtttt atcgcttcaa tgacgcagaa 1620
attagcaagt acggatattt ctgatgaaac caaaaactac gttactaatg caggaattgc 1680
tgttgctgac ttacgactta aatcgaagtg gactgctggt ggaaaatgaa gaacttcaat 1740
ctcaacttaa agaactcgag ggcgtcttac ttcgcaacct ttcgccatca tctaaacgtg 1800
gtggcaaaga ctgacgcact tgatgaggaa aaatggctca acatgatggg cgctcttctc 1860
aaggactggt tccgctatga acaacatttc gtacatggca aagaatcaat gcttgacatt 1920
ctaaatgaac gtggcctatt atccaccttg ccaaatggct taacttacaa aggaatcaaa 1980
aatgaaagca aatgagaacg cagtagcctt tcaaaccgct attgcctcca tcaaacttat 2040
tcaggcatct tctgttcttg acctgactga ggacgatttc gaattcttaa ctcgtgaccg 2100
tgtatggatt gcaactgacc gctcccgtgc tcgccgcgct attgaggctt gtgtttatgg 2160
aacactggac tttgtcggct atcctcgctt tcctgctcct attgagttta ttgctgccgt 2220
cattgcttat tatgttcatc ccgttaacat tcaaacggca tgtcttatta tggaaggcgc 2280
tgaattcacc gaaaacatca ttaatggtgt cgatgccccg gttaaagccg ctgaactctt 2340
cgcgtttacc ctgcgtgtac gcgccggaaa cactgaactt attacttacg cagaaaacaa 2400
cgcacgtgaa aaattacgtg ctcaaggagt gatggatgtc taaaaaatct attcgccgct 2460
ctggtggcaa atctaaaggt gctcgcctct ggtatgttgg cggcacacaa ttctaatctc 2520
taaggggctt cggcccctct atttaaggat acaaaatgtc taacgtacaa acttccgctg 2580
aacgtattcc gcatgacctc tcacatctgg tattcgaagc tggtaaaatc ggacgcctta 2640
aaactatctc ttggactcct gttgtcgctg gtgattctta cgaaactgaa atggtaggcg 2700
ctattcgtct ttctcctctc cgtcgtggtc tggctgttga ctctcgcgtc gacgtcttta 2760
ctttctatat ccctcatcgt catgtctatg gtcaacaatg gattgacttt atgaagactg 2820
gcgttaacgc tactcctctg gctccggtaa cttgttcctc tggctgggat tctgctgcct 2880
atcttggcac tatcccgtca actaatttga aggttcctaa attccttcat caatcttatc 2940
tcaatattta caacaattac tttaagccgc cgtggtctaa tgacctcacc tatgctaacc 3000
catctaatat gcccgctgag gattacaaat ggggcgttcg tgtcgctaac ttaaaatcta 3060
tctggaccgc gccccttcct cctgattcat taactaagca ggatatgact actggcgcta 3120
ccactatcga tattatgggc ctacaagctg cctatgctaa actccacact gaacaggaac 3180
gtgactattt catgactcgc taccgcgata ttatgaaaga ctttggcggt cacacctcct 3240
acgacggtga taaccgtcct ctgctcctga tgcgctctga attttgggcc tctggctatg 3300
acgtcgacgg tactgaccaa acttcattgg gtcagttctc cggtcgcgtc caacaaacct 3360
ttaatcataa agtgcctcgc ttctatgttc ctgagcatgg cgtaattatg actttatctg 3420
ttactcgctt ccctcctact cacgaaatgg aaatgcacta tctcgtcggt aaggaatctc 3480
tgacttatac tgacattgcc tgtgaccctg ctcttatggc taacctgcct ccgcgtgaaa 3540
ttgaggtaaa agacctcttt cactctgctg gtactggtaa attcaaaatt gccgaaggtc 3600
aatggtatcg tactcaacct gaccgcgttg ccttccctta taacgctctt gacggcttcc 3660
ctttctattc tgaactgccg tctaatgata ttctcgaacg tgtacttgtt cgaactgata 3720
actacgatga aatcttccag tctatgcaac ttgcacattg gaacatgcaa actaaattta 3780
acactactgt atatcgtcat atgcctacta ctcgtgatgg catcatgacg tcataaaaca 3840
aaacgttgaa cgggtacaaa ttttaatttg tgcctgttca aggttgaaca agcgaagcgc 3900
gttagctaac ttacttaagg aaattctcat gtttcaaact tatctctcta aacataattc 3960
tccgttaact tctcagtcta ttactgctac aaaaacacct gcggctgctg ctccgattat 4020
ttctacaccg gagcttagcc gctctactat tttcgctggc ttaactctga ctgctgccac 4080
tactcattct ggtgtcgctc atgtcgttcg tattgacgaa accaatccta ctgacaatca 4140
ggtcttatcg gtcgccgctt ctttatctgg cgtaccgtct gatgctattg ctattgctat 4200
tcgctttgag gtcgctgacg gtactgtccc tactgctctc cctgctctct actctgctta 4260
tccggtggaa ttcttcactt ctggcgctgc tctgtcttgt aaggatgccg tatctattcc 4320
gacgcatcct gttactgctg gtaatgatgt atatgctggt attcttatct ggtccaaatc 4380
ttgggccgct ggtgtcgtct ccggcctctt atctgttaat caggtaaacc gtgaaactac 4440
cgtactccaa cctcttaaat aaggtctaat ctatgttcgg tgcaatcgct ggcggtatcg 4500
cctcctctct cgctggtgga ctcctgaaca aagcattcgg gggcggctct tccgctcccc 4560
aatctggcgt tcaaggtaat gtcctcgcta ctgacaataa tgtaatcggt gctaatgatg 4620
ctggtatcaa atccgctatt cagggttcta atcctcccaa tggtcaacaa gctgctccca 4680
atgctatatc gggcgttctt gccgatactg gcaaagacgc cctatcttca atcactggcg 4740
ctggcgttaa taaacttatg gaaaaagtcg gactatctaa agatgctgct gctaaaggta 4800
aggatacaaa agattatctt gcttctgcgt tccccgaact caacccgtgg gaacgtgctg 4860
gcgctggtgc ttcttctgct ggaatggttg atgcgggatt ccaaaaccaa aaggaattaa 4920
ctcgtatgca gcttgacaat caaaaagaaa tcgctaagat gcaaaacgac actcaaaagg 4980
atatcgctgg tatccagtct cttacttctc ggcaaaatac taaggactct gtgtatgctc 5040
aaaacgaaat gctccaatac aaccaaaaag aatctatgtc acgtgttggc gctattctcg 5100
aaaacacaag cctcaccaaa caacaacaaa cttctgaaat tatgcggcaa atgcttactc 5160
aagctcagac cgcaggtcaa cattttacaa atgaccaaat ccaagaactt actcgaaagg 5220
tcggcgctga tattgatgct gttcgtgcta acactgaacg tacacatgta gaaacggacc 5280
gctctaaaca ggaggtccaa aactctcgtt acgcttcctc acaagtcggt aaaaccgcta 5340
aggatgtatc aaatgtcatt agtgacgcat cttctggtat tgttgattat tttcgtggcg 5400
ttgataaagc tgtcgcggat acttggaaca attatttcaa agatggcaaa tcggatggga 5460
taagctcaaa ccatcgtacc aaataa 5486
//
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