Dbfetch
ID DQ079894; SV 1; circular; genomic DNA; STD; PHG; 5386 BP. XX AC DQ079894; XX DT 25-JAN-2006 (Rel. 86, Created) DT 28-FEB-2006 (Rel. 87, Last updated, Version 2) XX DE Coliphage WA10, complete genome. XX KW . XX OS Enterobacteria phage WA10 OC Viruses; Microviridae; Bullavirinae; Sinsheimervirus; OC unclassified Sinsheimervirus. XX RN [1] RP 1-5386 RX DOI; 10.1128/JB.188.3.1134-1142.2006. RX PUBMED; 16428417. RA Rokyta D.R., Burch C.L., Caudle S.B., Wichman H.A.; RT "Horizontal gene transfer and the evolution of microvirid coliphage RT genomes"; RL J. Bacteriol. 188(3):1134-1142(2006). XX RN [2] RP 1-5386 RA Rokyta D.R., Burch C.L., Caudle S.B., Wichman H.A.; RT ; RL Submitted (31-MAY-2005) to the INSDC. RL Biological Sciences, University of Idaho, PO Box 443051, Moscow, ID RL 83844-3051, USA XX DR MD5; f9bd807d1dac6db0d7ac96ea64908e5d. DR EuropePMC; PMC5310724; 28053111. XX FH Key Location/Qualifiers FH FT source 1..5386 FT /organism="Enterobacteria phage WA10" FT /mol_type="genomic DNA" FT /db_xref="taxon:338125" FT gene join(3981..5386,1..136) FT /gene="A" FT CDS join(3981..5386,1..136) FT /codon_start=1 FT /transl_table=11 FT /gene="A" FT /product="gpA" FT /note="Rf replication; viral strand synthesis" FT /db_xref="GOA:Q2LLL7" FT /db_xref="InterPro:IPR008766" FT /db_xref="UniProtKB/TrEMBL:Q2LLL7" FT /protein_id="AAZ49214.1" FT /translation="MVRSYYPSECHADYFDFERIEALKPAIEACGISTLSQSPMLGFHK FT QMDNRIKLLEEILSFRMQGVEFDNGDMYVDGHKAASDVRDEFVSVTEKLMDELAQCYNV FT LPQLDINNTIDHRPEGDEKWFLENEKTVTQFCRKLAAERPLKDIRDEYNYPKKKGIKDE FT CSRLLEASTMKSRRGFTIQRLMNAMRQAHADGWFIVFDTLTLADDRLEAFYDNPNALRD FT YFRDIGRMVLAAEGRKANDSHADCYQYFCVPEYGTANGRLHFHAVHFMRTLPSGSVDPN FT FGRRVRNRRQLNSLQNTWPYGYSMPIAVRYTQDAFSRSGWLWPVDAKGEPLKATSYMAV FT GFYVAKYVNKKSDMDLAAKGLGAKEWNNSLKTKLSLLPKKLFRIRMSRNFGMKMLTMTN FT LSMECLIQLTKLGYDATPFNQILKQNAKREMRLRLAKVTVADVLAAQPVTTNLLKFMRA FT SIKMIGVSNLQSFIASMTQKLTLSDISDESKNYLDKAGITTACLRIKSKWTAGGK" FT gene join(4497..5386,1..136) FT /gene="A*" FT CDS join(4497..5386,1..136) FT /codon_start=1 FT /transl_table=11 FT /gene="A*" FT /product="gpA*" FT /function="shuts off host DNA synthesis" FT /db_xref="GOA:Q2LLL6" FT /db_xref="InterPro:IPR008766" FT /db_xref="UniProtKB/TrEMBL:Q2LLL6" FT /protein_id="AAZ49215.1" FT /translation="MKSRRGFTIQRLMNAMRQAHADGWFIVFDTLTLADDRLEAFYDNP FT NALRDYFRDIGRMVLAAEGRKANDSHADCYQYFCVPEYGTANGRLHFHAVHFMRTLPSG FT SVDPNFGRRVRNRRQLNSLQNTWPYGYSMPIAVRYTQDAFSRSGWLWPVDAKGEPLKAT FT SYMAVGFYVAKYVNKKSDMDLAAKGLGAKEWNNSLKTKLSLLPKKLFRIRMSRNFGMKM FT LTMTNLSMECLIQLTKLGYDATPFNQILKQNAKREMRLRLAKVTVADVLAAQPVTTNLL FT KFMRASIKMIGVSNLQSFIASMTQKLTLSDISDESKNYLDKAGITTACLRIKSKWTAGG FT K" FT gene join(5075..5386,1..51) FT /gene="B" FT CDS join(5075..5386,1..51) FT /codon_start=1 FT /transl_table=11 FT /gene="B" FT /product="gpB" FT /note="capsid morphogenesis" FT /db_xref="GOA:Q2LLL5" FT /db_xref="InterPro:IPR003513" FT /db_xref="InterPro:IPR038149" FT /db_xref="UniProtKB/TrEMBL:Q2LLL5" FT /protein_id="AAZ49216.1" FT /translation="MEQLTKNQAVATSQEAVQNQNEPQFRDENAHNDQSVHGMLNPTYQ FT AGLRRDAVQPDIEAERKKRDEIEAGKSYCSRRFGGATCDDKSAQIYARFDKNDWRVQPA FT EFYRFHDAEVNTFGYF" FT gene 51..221 FT /gene="K" FT CDS 51..221 FT /codon_start=1 FT /transl_table=11 FT /gene="K" FT /product="gpK" FT /db_xref="InterPro:IPR020962" FT /db_xref="UniProtKB/TrEMBL:Q2LLL4" FT /protein_id="AAZ49217.1" FT /translation="MSRKIILIKQELLLLVYELNRSGLLAENEKIRPILAQLEKLLLCD FT LSPSTNDSVKN" FT gene 133..393 FT /gene="C" FT CDS 133..393 FT /codon_start=1 FT /transl_table=11 FT /gene="C" FT /product="gpC" FT /note="DNA maturation" FT /db_xref="GOA:Q2LLL3" FT /db_xref="InterPro:IPR016407" FT /db_xref="UniProtKB/TrEMBL:Q2LLL3" FT /protein_id="AAZ49218.1" FT /translation="MRKFDLSLRSSRSSYFATFRHQLTILSKTDALDEEKWLNMLGTFV FT KDWFRYESHFVHGRDSLVDILKERGLLSESDAVQPLIGKKS" FT gene 390..848 FT /gene="D" FT CDS 390..848 FT /codon_start=1 FT /transl_table=11 FT /gene="D" FT /product="gpD" FT /note="capsid morphogenesis" FT /db_xref="GOA:Q2LLL2" FT /db_xref="InterPro:IPR004196" FT /db_xref="InterPro:IPR036632" FT /db_xref="UniProtKB/TrEMBL:Q2LLL2" FT /protein_id="AAZ49219.1" FT /translation="MSQVTEQSVRFQTALASIKLIQASAVLDLTEDDFDFLTSNKVWIA FT TDRSRARRCVEACVYGTLDFVGYPRFPAPVEFIAAVIAYYVHPVNIQTACLIMEGAEFT FT ENIINGVERPVKAAELFAFTLRVRAGNTDVLTDAEENVRQKLRAEGVM" FT gene 568..843 FT /gene="E" FT CDS 568..843 FT /codon_start=1 FT /transl_table=11 FT /gene="E" FT /product="gpE" FT /note="cell lysis protein" FT /db_xref="GOA:Q2LLL1" FT /db_xref="InterPro:IPR007605" FT /db_xref="UniProtKB/TrEMBL:Q2LLL1" FT /protein_id="AAZ49220.1" FT /translation="MVRWTLWDTLAFLLLLSLLLPSLLIMFIPSTFKRPASSWKALNLR FT KTLLMASSVRLKPLNCSRLPCVYAQETLTFLLTQKKTCVKNYAQKE" FT gene 848..964 FT /gene="J" FT CDS 848..964 FT /codon_start=1 FT /transl_table=11 FT /gene="J" FT /product="gpJ" FT /note="core protein; DNA condensation" FT /db_xref="GOA:Q2LLL0" FT /db_xref="InterPro:IPR006815" FT /db_xref="UniProtKB/TrEMBL:Q2LLL0" FT /protein_id="AAZ49221.1" FT /translation="MSKGKKRSGARPGRPQPLRGTKGKRKGARLWYVGGQQF" FT gene 1001..2284 FT /gene="F" FT CDS 1001..2284 FT /codon_start=1 FT /transl_table=11 FT /gene="F" FT /product="gpF" FT /note="major coat protein" FT /db_xref="GOA:Q2LLK9" FT /db_xref="InterPro:IPR003514" FT /db_xref="InterPro:IPR016184" FT /db_xref="InterPro:IPR037002" FT /db_xref="UniProtKB/TrEMBL:Q2LLK9" FT /protein_id="AAZ49222.1" FT /translation="MSNVQTGAERMPHDLSHLGFLAGQIGRLITISTTPVIAGDSFEMD FT AVGALRLSPLRRGLAIDSTVDIFTFYVPHRHVYGEQWIKFMKDGVNATPLPTVNTTGYI FT DHAAFLGTINPDTNKIPKHLFQGYLNIYNNYFKAPWMPDRTEANPNELNEDDARYGFRC FT CHLKNIWTAPLPPETELSRQMTTSTTSIDIMGLQAAYANLHTDQERDYFMQRYRDVISS FT FGGKTSYDADNRPLLVMRSNFWASGYDVDGTDQTSLGQFSGRVQQTYKHSVPRFFVPEH FT GTMFTLALVRFPPTATKEIQYLNAKGALTYTDIAGDPALYGNLPPREISMKDVFRSGDS FT SKKFKIAEGQWYRYAPSYVSPAYHLLEGFPFIQEPPSGDLQERVLIRHHDYDQCFQSVQ FT LLQWNSQVKFNVTVYRNLPTTRDSIMTS" FT gene 2395..2922 FT /gene="G" FT CDS 2395..2922 FT /codon_start=1 FT /transl_table=11 FT /gene="G" FT /product="gpG" FT /note="major spike protein" FT /db_xref="GOA:Q2LLK8" FT /db_xref="InterPro:IPR003515" FT /db_xref="InterPro:IPR016184" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q2LLK8" FT /protein_id="AAZ49223.1" FT /translation="MFQTFISRHNSNFFSDKLVATSVTPASLAPVLQTPKATSSTLFFD FT SLTINAGNGGFLHCIQMDTSVNAANQVVSVGADIAFDADPKFFACLVRFESASVPTTLS FT TAYDVYPLDGRHDGGYYTVKDCVTIDVLPRTPGNNVYVGFMVWSNFTATKCRGLVSLNQ FT VIKEIICLQPLK" FT gene 2931..3917 FT /gene="H" FT CDS 2931..3917 FT /codon_start=1 FT /transl_table=11 FT /gene="H" FT /product="gpH" FT /note="minor spike protein" FT /db_xref="GOA:Q2LLK7" FT /db_xref="InterPro:IPR006777" FT /db_xref="UniProtKB/TrEMBL:Q2LLK7" FT /protein_id="AAZ49224.1" FT /translation="MFGAIAGGIASALAGGAMSKLFGGGQKAASGGIQGDVLATDNNTV FT GMGDAGIKSAIQGSNVPNPDEAAPNFVSGAMAKAGKGLLEGTLQAGTSAVSDKLLDLVG FT LGGKSAADKGKDTRDYLAAAFPELNAWERAGAGASSAGMVDAGFENQKELTKMQLDNQK FT EIAEMQNETQKEIAGIQSATSRQNTKDQVYAQNEMLAYQQKESTARVASIMENTNLSKQ FT QQVSEIMRQMLTQAQTAGQYFTNDQIKEMTRKVSAEVDLVHQQTQNQRYGSSHIGATAK FT DISNVVTDAASGVVDIFHGIDKAVADTWNNFWKDGKADGIGSNLSRK" XX SQ Sequence 5386 BP; 1288 A; 1152 C; 1257 G; 1689 T; 0 other; gagttttatc gcttccatga cgcagaagtt aacactttcg gatatttctg atgagtcgaa 60 aaattatctt gataaagcag gaattactac tgcttgttta cgaattaaat cgaagtggac 120 tgctggcgga aaatgagaaa attcgaccta tccttgcgca gctcgagaag ctcctacttt 180 gcgacctttc gccatcaact aacgattctg tcaaaaactg acgcgttgga tgaggagaag 240 tggcttaata tgcttggcac gttcgttaag gactggttta gatatgagtc acattttgtt 300 cacggtagag attctcttgt tgacatttta aaagagcgtg gattactatc tgagtccgat 360 gctgttcaac cactaatagg taaaaaatca tgagtcaagt tactgaacaa tctgtacgtt 420 tccagactgc gctggcctcc attaagctga ttcaggcttc tgccgttttg gatttaaccg 480 aagatgattt cgattttctg acgagtaaca aggtttggat tgccactgac cgctctcgtg 540 ctcgtcgctg cgttgaggct tgcgtttatg gtacgctgga ctttgtggga taccctcgct 600 ttcctgctcc tgttgagttt attgctgccg tcattgctta ttatgttcat cccgtcaaca 660 ttcaaacggc ctgcctcatc atggaaggcg ctgaatttac ggaaaacatt attaatggcg 720 tcgagcgtcc ggttaaagcc gctgaattgt tcgcgtttac cttgcgtgta cgcgcaggaa 780 acactgacgt tcttactgac gcagaagaaa acgtgcgtca aaaattacgc gcagaaggag 840 tgatgtaatg tctaaaggta aaaaacgttc tggcgctcgt cccggtcgcc cgcagccgtt 900 gcgaggcact aaaggtaagc gcaaaggtgc tcgcctttgg tatgtaggtg gtcaacaatt 960 ttaattgcag gggcttcggc cccttacttg aggataaatt atgtccaatg ttcaaactgg 1020 cgccgagcgt atgccgcatg acctttccca tcttggcttc cttgctggtc agattggtcg 1080 tcttattacc atttcaacta ctccggttat cgctggcgac tccttcgaga tggacgccgt 1140 tggcgctctc cgtctttctc cattgcgtcg tggccttgct attgactcta ctgtagatat 1200 ttttactttt tatgtccctc accgtcatgt ttatggtgaa cagtggatta agtttatgaa 1260 ggatggtgtt aacgctactc cccttccgac cgttaacact actggttata ttgaccacgc 1320 tgcttttctt ggcacgatta accctgatac caataaaatt cctaagcatt tgtttcaggg 1380 ttatttgaat atctacaaca actattttaa agcgccgtgg atgcctgacc gtaccgaggc 1440 taaccccaat gagcttaatg aagatgatgc ccgctatggt ttccgttgct gccatcttaa 1500 aaacatttgg actgctccgc ttcctcctga gactgagctt tctcgccaaa tgacgacttc 1560 tactacgtcc attgacatta tgggtctgca agctgcttat gctaatttgc atactgacca 1620 agaacgtgat tatttcatgc agcgttaccg tgatgttatt tcttcatttg gaggtaaaac 1680 ctcttatgac gccgacaacc gtcctttact tgtcatgcgt tctaattttt gggcatctgg 1740 ctatgatgtt gatggaactg accaaacgtc gttaggccag ttttctggcc gtgttcaaca 1800 gacctataaa cattctgtgc cgcgtttctt tgttcctgag cacggcacta tgtttactct 1860 tgcgcttgtt cgttttccgc ctactgcgac taaagagatt cagtacctta atgctaaagg 1920 tgctttgact tataccgata ttgctggcga ccctgctttg tatggcaact tgccgccgcg 1980 tgaaatttct atgaaggatg ttttccgttc tggtgattcc tctaagaagt ttaagattgc 2040 cgagggtcaa tggtatcgtt atgcgccttc ttatgtttct cctgcatatc accttcttga 2100 aggcttccca tttattcagg aaccgccttc cggtgatttg caagaacgtg tacttattcg 2160 ccatcatgac tatgaccagt gtttccagtc tgttcagttg ttgcagtgga atagtcaggt 2220 taaatttaat gtgaccgttt atcgcaatct gccgaccact cgcgattcaa ttatgacttc 2280 gtgataaaag attgagtgtg aggttgtaac gccgaagcgg taaaaatttt aatttttgcc 2340 gctgaggggt tgaccaagcg aagcgcggta ggttttctgc ttaggagttt aatcatgttt 2400 cagactttta tttctcgcca taattcaaac tttttttctg ataagctggt tgccacttct 2460 gttactccag cttctttagc acctgtttta cagacaccta aagctacatc gtcaacttta 2520 ttttttgata gtttgacgat taatgctggt aatggtggtt ttctccattg cattcagatg 2580 gatacatctg ttaatgccgc taatcaggtt gtttctgttg gtgctgatat tgcttttgat 2640 gccgacccta aattttttgc ctgtttggtt cgttttgagt ccgcttcggt tccgactact 2700 ctctcgaccg cctatgatgt ttatcctttg gatggtcgcc atgatggcgg ttattatact 2760 gttaaggatt gcgtgactat tgacgtcctc ccccgtacgc cgggcaataa tgtttatgtt 2820 ggtttcatgg tttggtctaa ctttaccgct actaaatgcc gcggattggt ttcgctgaat 2880 caggttatta aagaaattat ttgtcttcag ccacttaagt gaggtgattt atgtttggtg 2940 ctattgctgg cggtattgct tctgctcttg ctggcggcgc catgtctaaa ttgtttggag 3000 gcggtcaaaa agccgcctcc ggtggcattc aaggtgatgt gcttgctacc gataacaata 3060 ctgtaggcat gggtgatgct ggcattaaat ctgccattca aggctctaat gttcccaacc 3120 ctgatgaggc cgcacctaac tttgtttctg gtgctatggc taaagctggt aaaggacttc 3180 ttgaaggtac gttgcaagct ggcacttctg ccgtttctga taagttgctt gatttggttg 3240 gacttggtgg caagtctgct gctgataaag gaaaggatac tcgtgattat cttgctgctg 3300 catttcctga gcttaatgct tgggagcgtg ctggtgctgg tgcttcctct gctggtatgg 3360 ttgacgccgg atttgagaat caaaaagagc ttactaaaat gcaattggac aatcagaaag 3420 agattgccga gatgcaaaat gagactcaaa aagagattgc tggcattcag tcggcgactt 3480 cacgccagaa tacgaaagac caggtatatg cacaaaatga gatgcttgct tatcaacaga 3540 aggagtctac tgctcgcgtt gcgtctatta tggaaaacac caatctttcc aagcagcagc 3600 aggtttccga gattatgcga cagatgctta cgcaagctca aacggctggt cagtatttta 3660 ccaatgacca aatcaaagaa atgactcgca aggttagtgc tgaggttgac ttagttcatc 3720 agcaaacaca gaatcagcgg tatggttctt ctcatattgg cgctactgca aaggatatct 3780 ctaatgtcgt cactgatgct gcttctggtg tggttgatat ttttcatggt attgataaag 3840 ctgttgccga tacttggaac aatttctgga aagatggtaa agctgatggt attggctcta 3900 atttgtctag gaagtaaccg tcaggattga cacctttctt attgtatgat ttcatgcctc 3960 caaactttgg aggctttttt atggttcgtt cttattaccc ttctgaatgt cacgctgatt 4020 attttgactt tgagcgtatt gaggctctta aacctgctat tgaggcttgt ggcatttcta 4080 ctctttctca atccccgatg cttggcttcc ataagcagat ggataaccgc atcaagctct 4140 tggaagagat tttgtctttt cgtatgcagg gtgttgagtt cgataatggt gatatgtatg 4200 ttgacggcca taaggctgct tctgacgttc gtgatgagtt tgtgtctgtt actgagaagt 4260 taatggatga attggcacaa tgctacaatg tgctccccca acttgatatt aataacacta 4320 tagaccaccg ccccgaaggg gacgaaaaat ggtttttaga gaacgagaag acggttacgc 4380 agttttgccg caagctggct gctgaacgcc ctcttaagga tattcgcgat gagtataatt 4440 accccaaaaa gaaaggtatt aaggatgagt gttcaagatt gttggaggct tccactatga 4500 aatcccgcag aggctttact attcagcgtt tgatgaatgc aatgcgtcag gctcatgccg 4560 atggttggtt tatcgttttt gacactctca cgttggctga cgaccgatta gaggcgtttt 4620 atgataaccc caatgctttg cgtgactatt ttcgtgatat tggtcgtatg gttcttgctg 4680 ccgagggtcg taaggctaat gactcacacg ccgactgcta tcagtatttt tgtgtgcctg 4740 agtatggtac agctaatggc cgtcttcatt tccatgcggt gcattttatg cggacacttc 4800 cttcaggtag cgttgaccct aactttggtc gtcgggtacg caatcgccgc cagttaaata 4860 gcttgcaaaa tacgtggcct tatggttaca gtatgcccat cgcagttcgc tacacgcagg 4920 acgccttttc acgttctggt tggttgtggc ctgttgatgc taaaggtgag ccgcttaaag 4980 ctaccagtta tatggctgtt ggtttctatg tggctaaata cgttaacaaa aagtcagata 5040 tggaccttgc tgctaaaggt ctaggagcta aagaatggaa caactcacta aaaaccaagc 5100 tgtcgctact tcccaagaag ctgttcagaa tcagaatgag ccgcaatttc gggatgaaaa 5160 tgctcacaat gaccaatctg tccatggaat gcttaatcca acttaccaag ctgggttacg 5220 acgcgacgcc gttcaaccag atattgaagc agaacgcaaa aagagagatg agattgaggc 5280 tggcaaaagt tactgtagcc gacgttttgg cggcgcaacc tgtgacgaca aatctgctca 5340 aatttatgcg cgcttcgata aaaatgattg gcgtgtccaa cctgca 5386 //