ID   DQ002880; SV 1; linear; mRNA; STD; VRL; 819 BP.
XX
AC   DQ002880;
XX
DT   03-MAY-2007 (Rel. 91, Created)
DT   03-MAY-2007 (Rel. 91, Last updated, Version 1)
XX
DE   Cucumber mosaic virus isolate EI1 coat protein (CP) mRNA, complete cds.
XX
KW   .
XX
OS   Cucumber mosaic virus (cucumber mosaic cucumovirus)
OC   Viruses; Riboviria; Bromoviridae; Cucumovirus.
XX
RN   [1]
RP   1-819
RA   Sokhandan Bashir N., Nematallahi S.;
RT   "Detection, differentiation, and phylogenetic analysis of cucumber mosaic
RT   viruses isolated from cucurbits planted in the North West region of Iran";
RL   Unpublished.
XX
RN   [2]
RP   1-819
RA   Sokhandan Bashir N., Nematallahi S.;
RT   ;
RL   Submitted (08-APR-2005) to the INSDC.
RL   Plant Protection, University of Tabriz, 29 Bahman Blvd., Tabriz, E. Az.
RL   51664, Iran
XX
DR   MD5; a30bbf13e70c16c0383327b33776bbb7.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..819
FT                   /organism="Cucumber mosaic virus"
FT                   /host="squash"
FT                   /isolate="EI1"
FT                   /mol_type="mRNA"
FT                   /country="Iran:Tabriz"
FT                   /isolation_source="typical mosaic"
FT                   /clone="C1"
FT                   /note="serogroup: I"
FT                   /db_xref="taxon:12305"
FT   gene            1..819
FT                   /gene="CP"
FT   CDS             57..713
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /note="capsid protein"
FT                   /db_xref="GOA:Q8JPW8"
FT                   /db_xref="InterPro:IPR000247"
FT                   /db_xref="InterPro:IPR023800"
FT                   /db_xref="InterPro:IPR037137"
FT                   /db_xref="UniProtKB/TrEMBL:Q8JPW8"
FT                   /protein_id="AAY46234.1"
FT                   /translation="MDKSESTSAGRNRRRRPRRGSRSAPSSADANFRVLSQQLSRLNKT
FT                   LAAGRPTINHPTFVGSERCKPGYTFTSITLKPPKIDRGSYYGKRLLLPDSVTEYDKKLV
FT                   SRIQIRVNPLPKFDSTVWVTVRKVPASSDLSVAAISAMFADGASPVLVYQYAASGVQAN
FT                   NKLLYDLSAMRADIGDMRKYAVLVYSKDDALETDELVLHVDVEHQRIPTSGVLPV"
XX
SQ   Sequence 819 BP; 185 A; 203 C; 198 G; 230 T; 3 other;
     tatagagagt gtgtgtgctg tgttttctct tttgtgtcgt agaattgagt cgagtcatgg        60
     acaaatctga atcaaccagt gctggtcgca accgtcgacg tcgtccgcgt cgtggttccc       120
     gctccgcccc ctcctccgcg gatgccaact ttagagtctt gtcgcagcag ctttcgcgac       180
     ttaataagac gttggcagct ggtcgtccaa ctattaacca cccaaccttt gtagggagtg       240
     agcgttgtaa acctggatac acgttcacat ctattaccct aaagccacca aaaatagacc       300
     gtgggtctta ttatggtaaa aggttgctat tacctgattc agtcacagaa tatgacaaga       360
     aacttgtttc gcgcattcaa attcgagtta atcctttgcc gaaatttgat tctaccgtgt       420
     gggtgacagt ccgtaaagtt cctgcctcct cggacttatc cgttgccgcc atctctgcta       480
     tgtttgcgga cggagcctca ccggtactgg tttatcagta tgctgcatct ggagtccaag       540
     ctaacaacaa attgttgtat gatctttcgg cgatgcgcgc tgatataggc gacatgagaa       600
     agtacgccgt cctcgtgtac tcaaaagacg atgcactcga gacggacgag ctagtacttc       660
     atgttgacgt cgagcaccaa cgcattccca cgtctggggt gctcccagta tgattctgtg       720
     ttttccagaa ccctccctcc gatttctgtg gcgggagctg agttggnagt tctgctgnaa       780
     actgtctgaa gtcactaaac gttttacggn gaacgggtt                              819
//