ID DQ000496; SV 1; linear; genomic DNA; STD; VRL; 5299 BP. XX AC DQ000496; XX DT 26-AUG-2005 (Rel. 85, Created) DT 01-MAR-2018 (Rel. 136, Last updated, Version 4) XX DE Primate bocaparvovirus 1 isolate st2, complete genome. XX KW . XX OS Bocaparvovirus primate1 OC Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Quintoviricetes; OC Piccovirales; Parvoviridae; Parvovirinae; Bocaparvovirus. XX RN [1] RC Erratum:[Proc Natl Acad Sci U S A. 2005 Oct 25;102(43):15712] RP 1-5299 RX DOI; 10.1073/pnas.0504666102. RX PUBMED; 16118271. RA Allander T., Tammi M.T., Eriksson M., Bjerkner A., Tiveljung-Lindell A., RA Andersson B.; RT "Cloning of a human parvovirus by molecular screening of respiratory tract RT samples"; RL Proc. Natl. Acad. Sci. U.S.A. 102(36):12891-12896(2005). XX RN [2] RP 1-5299 RA Allander T., Tammi M.T., Eriksson M., Bjerkner A., Tiveljung Lindell A., RA Andersson B.; RT ; RL Submitted (06-APR-2005) to the INSDC. RL Center for Genomics and Bioinformatics, Karolinska Institutet, Berzelius RL Vag 35, Stockholm SE-171 77, Sweden XX DR MD5; c7d8ad9d950c839828cfdec4a2562da2. DR EuropePMC; PMC1200281; 16118271. DR EuropePMC; PMC1393160; 16517912. DR EuropePMC; PMC1796861; 17266760. DR EuropePMC; PMC1829076; 17122013. DR EuropePMC; PMC2224261; 17977996. DR EuropePMC; PMC2600186; 18258113. DR EuropePMC; PMC2663281; 19211770. DR EuropePMC; PMC2663820; 19381259. DR EuropePMC; PMC2672801; 19436697. DR EuropePMC; PMC2681590; 19244471. DR EuropePMC; PMC2725817; 17370538. DR EuropePMC; PMC2819894; 19788810. DR EuropePMC; PMC2879452; 20457462. DR EuropePMC; PMC2919546; 20646318. DR EuropePMC; PMC2957997; 20113572. DR EuropePMC; PMC3067724; 21227992. DR EuropePMC; PMC3087758; 21573237. DR EuropePMC; PMC3129349; 21779192. DR EuropePMC; PMC3280267; 22355331. DR EuropePMC; PMC3291126; 22389649. DR EuropePMC; PMC3291229; 16965708. DR EuropePMC; PMC3294732; 17073104. DR EuropePMC; PMC3310460; 22305021. DR EuropePMC; PMC3374420; 16704852. DR EuropePMC; PMC3382199; 22761854. DR EuropePMC; PMC3439446; 22984581. DR EuropePMC; PMC3837656; 24209884. DR EuropePMC; PMC3838256; 24109231. DR EuropePMC; PMC3874741; 24161033. DR EuropePMC; PMC4177804; 24373295. DR EuropePMC; PMC4254310; 25194919. DR EuropePMC; PMC4539892; 25632039. DR EuropePMC; PMC4577888; 26223640. DR EuropePMC; PMC4733993; 26637456. DR EuropePMC; PMC5780762; 22531100. DR EuropePMC; PMC6206480; 30135129. XX FH Key Location/Qualifiers FH FT source 1..5299 FT /organism="Bocaparvovirus primate1" FT /isolate="st2" FT /mol_type="genomic DNA" FT /db_xref="taxon:3052040" FT gene 253..2172 FT /gene="NS1" FT /inference="non-experimental evidence, no additional FT details recorded" FT CDS 253..2172 FT /codon_start=1 FT /gene="NS1" FT /product="NS1" FT /db_xref="GOA:D0EZM8" FT /db_xref="InterPro:IPR001257" FT /db_xref="InterPro:IPR014015" FT /db_xref="InterPro:IPR027417" FT /db_xref="PDB:4KW3" FT /db_xref="UniProtKB/Swiss-Prot:D0EZM8" FT /protein_id="AAY45700.1" FT /translation="MAFNPPVIRAFSQPAFTYVFKFPYPQWKEKEWLLHALLAHGTEQS FT MIQLRNCAPHPDEDIIRDDLLISLEDRHFGAVLCKAVYMATTTLMSHKQRNMFPRCDII FT VQSELGEKNLHCHIIVGGEGLSKRNAKSSCAQFYGLILAEIIQRCKSLLATRPFEPEEA FT DIFHTLKKAEREAWGGVTGGNMQILQYRDRRGDLHAQTVDPLRFFKNYLLPKNRCISSY FT SKPDVCTSPDNWFILAEKTYSHTLINGLPLPEHYRKNYHATLDNEVIPGPQTMAYGGRG FT PWEHLPEVGDQRLAASSVSTTYKPNKKEKLMLNLLDKCKELNLLVYEDLVANCPELLLM FT LEGQPGGARLIEQVLGMHHINVCSNFTALTYLFHLHPVTSLDSDNKALQLLLIQGYNPL FT AVGHALCCVLNKQFGKQNTVCFYGPASTGKTNMAKAIVQGIRLYGCVNHLNKGFVFNDC FT RQRLVVWWEECLMHQDWVEPAKCILGGTECRIDVKHRDSVLLTQTPVIISTNHDIYAVV FT GGNSVSHVHAAPLKERVIQLNFMKQLPQTFGEITATEIAALLQWCFNEYDCTLTGFKQK FT WNLDKIPNSFPLGVLCPTHSQDFTLHENGYCTDCGGYLPHSADNSMYTDRASETSTGDI FT TPSK" FT gene 2410..3069 FT /gene="NP-1" FT /inference="non-experimental evidence, no additional FT details recorded" FT CDS 2410..3069 FT /codon_start=1 FT /gene="NP-1" FT /product="NP-1" FT /db_xref="GOA:Q3YPH5" FT /db_xref="InterPro:IPR021075" FT /db_xref="UniProtKB/Swiss-Prot:Q3YPH5" FT /protein_id="AAY45701.1" FT /translation="MSSGNMKDKHRSYKRKGSPERGERKRHWQTTHHRSRSRSPIRHSG FT ERGSGSYHQEHPISHLSSCTASKTSDQVMKTRESTSGKKDNRTNPYTVFSQHRASNPEA FT PGWCGFYWHSTRIARDGTNSIFNEMKQQFQQLQIDNKIGWDNTRELLFNQKKTLDQKYR FT NMFWHFRNNSDCERCNYWDDVYRRHLANVSSQTEADEITDEEMLSAAESMEADASN" FT gene 3056..5071 FT /gene="VP1" FT /inference="non-experimental evidence, no additional FT details recorded" FT CDS 3056..5071 FT /codon_start=1 FT /gene="VP1" FT /product="VP1" FT /db_xref="GOA:Q3YPH4" FT /db_xref="InterPro:IPR001403" FT /db_xref="InterPro:IPR013607" FT /db_xref="InterPro:IPR016184" FT /db_xref="InterPro:IPR036952" FT /db_xref="PDB:5URF" FT /db_xref="UniProtKB/Swiss-Prot:Q3YPH4" FT /protein_id="AAY45702.1" FT /translation="MPPIKRQPRGWVLPGYRYLGPFNPLDNGEPVNNADRAAQLHDHAY FT SELIKSGKNPYLYFNKADEKFIDDLKDDWSIGGIIGSSFFKIKRAVAPALGNKERAQKR FT HFYFANSNKGAKKTKKSEPKPGTSKMSDTDIQDQQPDTVDAPQNTSGGGTGSIGGGKGS FT GVGISTGGWVGGSHFSDKYVVTKNTRQFITTIQNGHLYKTEAIETTNQSGKSQRCVTTP FT WTYFNFNQYSCHFSPQDWQRLTNEYKRFRPKAMQVKIYNLQIKQILSNGADTTYNNDLT FT AGVHIFCDGEHAYPNASHPWDEDVMPDLPYKTWKLFQYGYIPIENELADLDGNAAGGNA FT TEKALLYQMPFFLLENSDHQVLRTGESTEFTFNFDCEWVNNERAYIPPGLMFNPKVPTR FT RVQYIRQNGSTAASTGRIQPYSKPTSWMTGPGLLSAQRVGPQSSDTAPFMVCTNPEGTH FT INTGAAGFGSGFDPPNGCLAPTNLEYKLQWYQTPEGTGNNGNIIANPSLSMLRDQLLYK FT GNQTTYNLVGDIWMFPNQVWDRFPITRENPIWCKKPRADKHTIMDPFDGSIAMDHPPGT FT IFIKMAKIPVPTASNADSYLNIYCTGQVSCEIVWEVERYATKNWRPERRHTALGMSLGG FT ESNYTPTYHVDPTGAYIQPTSYDQCMPVKTNINKVL" FT gene 3443..5071 FT /gene="VP2" FT /inference="non-experimental evidence, no additional FT details recorded" FT CDS 3443..5071 FT /codon_start=1 FT /gene="VP2" FT /product="VP2" FT /db_xref="GOA:Q3YPH4" FT /db_xref="InterPro:IPR001403" FT /db_xref="InterPro:IPR013607" FT /db_xref="InterPro:IPR016184" FT /db_xref="InterPro:IPR036952" FT /db_xref="PDB:5URF" FT /db_xref="UniProtKB/Swiss-Prot:Q3YPH4" FT /protein_id="AAY45703.1" FT /translation="MSDTDIQDQQPDTVDAPQNTSGGGTGSIGGGKGSGVGISTGGWVG FT GSHFSDKYVVTKNTRQFITTIQNGHLYKTEAIETTNQSGKSQRCVTTPWTYFNFNQYSC FT HFSPQDWQRLTNEYKRFRPKAMQVKIYNLQIKQILSNGADTTYNNDLTAGVHIFCDGEH FT AYPNASHPWDEDVMPDLPYKTWKLFQYGYIPIENELADLDGNAAGGNATEKALLYQMPF FT FLLENSDHQVLRTGESTEFTFNFDCEWVNNERAYIPPGLMFNPKVPTRRVQYIRQNGST FT AASTGRIQPYSKPTSWMTGPGLLSAQRVGPQSSDTAPFMVCTNPEGTHINTGAAGFGSG FT FDPPNGCLAPTNLEYKLQWYQTPEGTGNNGNIIANPSLSMLRDQLLYKGNQTTYNLVGD FT IWMFPNQVWDRFPITRENPIWCKKPRADKHTIMDPFDGSIAMDHPPGTIFIKMAKIPVP FT TASNADSYLNIYCTGQVSCEIVWEVERYATKNWRPERRHTALGMSLGGESNYTPTYHVD FT PTGAYIQPTSYDQCMPVKTNINKVL" XX SQ Sequence 5299 BP; 1714 A; 1154 C; 1085 G; 1346 T; 0 other; gccggcagac atattggatt ccaagatggc gtctgtacaa ccacgtcaca tataaaataa 60 taaatattca caaggaggag tggttatatg atgtaatcca taaccactcc caggaaatga 120 cgtatgatag ccaatcagaa ttgagtatta aacctatata agctgctgca cttcctgatt 180 caatcagact gcatccggtc tccggcgagt gaacatctct ggaaaaagct ccacgcttgt 240 ggtgagtcta ctatggcttt caatcctcct gtgattagag ctttttctca acctgctttt 300 acttatgtct tcaaatttcc atatccacaa tggaaagaaa aagaatggct gcttcatgca 360 cttttagctc atggaactga acaatctatg atacaattaa gaaactgcgc tcctcatccg 420 gatgaagaca taatccgtga tgacttgctt atttctttag aagatcgcca ttttggggct 480 gttctctgca aggctgttta catggcaaca actactctca tgtcacacaa acaaaggaat 540 atgtttcctc gttgtgacat catagttcag tctgagctag gagagaaaaa cttacactgc 600 catattatag ttgggggaga aggactaagc aagaggaatg ctaaatcatc ctgtgctcag 660 ttctatggtt taatactagc tgagataatt caacgctgca aatctcttct ggctacacgt 720 ccttttgaac ctgaggaggc tgacatattt cacactctaa aaaaggctga gcgagaggca 780 tggggtggag ttactggcgg caacatgcag atccttcaat atagagatcg cagaggagac 840 cttcatgcac aaacagtgga tcctcttcgc ttcttcaaaa actacctttt acctaaaaat 900 agatgtattt catcttacag caaacctgat gtttgtactt ctcctgacaa ctggttcatt 960 ttagctgaaa aaacttactc tcacactctt attaacgggc tgccgcttcc agaacattac 1020 agaaaaaact accacgcaac cctagataac gaagtcattc cagggcctca aacaatggcc 1080 tatggaggac gtggtccgtg ggaacatctt cctgaggtag gagatcagcg cctagctgcg 1140 tcttctgtta gcactactta taaacctaac aaaaaagaaa aacttatgct aaacttgcta 1200 gacaaatgta aagagctaaa tctattagtt tatgaagact tagtagctaa ttgtcctgaa 1260 ctactcctta tgcttgaagg tcaaccagga ggggcacgcc ttatagaaca agtcttgggc 1320 atgcaccata ttaatgtttg ttctaacttt acagctctca catatctttt tcatctacat 1380 cctgttactt cgcttgactc agacaataaa gctttacagc ttttgttgat tcaaggctat 1440 aatcctctag ccgttggtca cgccctgtgc tgtgtcctga acaaacaatt cgggaaacaa 1500 aacactgttt gcttttacgg gcctgcctca acaggtaaaa caaatatggc caaggcaatc 1560 gtccaaggga ttagacttta tgggtgtgtt aatcatttga acaaaggatt tgtatttaat 1620 gactgcagac aacgcctagt tgtttggtgg gaggagtgct taatgcacca ggattgggtg 1680 gaacctgcaa agtgtatctt gggcgggaca gaatgcagaa ttgacgtcaa gcatagagac 1740 agtgtacttt taactcaaac acctgtaatt atatccacta accacgatat ctacgcggtt 1800 gttggtggca attctgtttc tcatgttcac gcggctccat taaaagaaag agtgattcag 1860 ctaaatttta tgaaacaact tcctcaaaca tttggagaaa tcactgctac tgagattgca 1920 gctcttctac agtggtgttt caatgagtac gactgtactc tgacaggatt taaacaaaaa 1980 tggaatttag ataaaattcc aaactcattt cctcttgggg tcctttgtcc tactcattca 2040 caggacttta cacttcacga aaacggatac tgcactgatt gcggtggtta ccttcctcat 2100 agtgctgaca attctatgta cactgatcgc gcaagcgaaa ctagcacagg agacatcaca 2160 ccaagtaagt aaatacgcat gcgcaagtaa ttcttttact ttcacttcgc tatttttacc 2220 aatttttact tttaggtgac ttgggggatt cggacggaga agacaccgag cctgagacat 2280 cgcaagtgga ctattgtcca cccaagaaac gtcgtctaac tgctccagca agtcctccaa 2340 actcacctgc gagctctgta agtactatta ctttctttaa cacttggcac gcacagccac 2400 gtgacgaaga tgagctcagg gaatatgaaa gacaagcatc gctcctacaa aagaaaaggg 2460 agtccagaaa gaggggagag gaagagacac tggcagacaa ctcatcacag gagcaggagc 2520 cgcagcccga tccgacacag tggggagaga ggctcgggct catatcatca ggaacaccca 2580 atcagccacc tatcgtcttg cactgcttcg aagacctcag accaagtgat gaagacgagg 2640 gagagtacat cggggaaaaa agacaataga acaaatccat acactgtatt cagtcaacac 2700 agagcttcca atcctgaagc tccagggtgg tgtgggttct actggcactc tactcgcatt 2760 gctagagatg gtactaattc aatctttaat gaaatgaaac aacagtttca acaactacaa 2820 attgataata aaataggatg ggataacact agagaactat tgtttaatca aaagaaaaca 2880 ctagatcaaa aatacagaaa tatgttctgg cactttagaa ataactctga ttgtgaaaga 2940 tgtaattact gggatgatgt gtaccgtaga cacttagcta atgtttcctc acagacagaa 3000 gcagacgaga taactgacga ggaaatgctt tctgctgctg aaagcatgga agcagatgcc 3060 tccaattaag agacagccta gagggtgggt gctgcctgga tacagatatc ttgggccatt 3120 taatccactt gataacggtg aacctgtaaa taacgctgat cgcgctgctc aattacatga 3180 tcacgcctac tctgaactaa taaagagtgg taaaaatcca tacctgtatt tcaataaagc 3240 tgatgaaaaa ttcattgatg atctaaaaga cgattggtca attggtggaa ttattggatc 3300 cagttttttt aaaataaagc gcgccgtggc tcctgctctg ggaaataaag agagagccca 3360 aaaaagacac ttttactttg ctaactcaaa taaaggtgca aaaaaaacaa aaaaaagtga 3420 acctaaacca ggaacctcaa aaatgtctga cactgacatt caagaccaac aacctgatac 3480 tgtggacgca ccacaaaaca cctcaggggg aggaacagga agtattggag gaggaaaagg 3540 atctggtgtg gggatttcca ctggagggtg ggtcggaggt tctcactttt cagacaaata 3600 tgtggttact aaaaacacaa gacaatttat aaccacaatt cagaatggtc acctctacaa 3660 aacagaggcc attgaaacaa caaaccaaag tggaaaatca cagcgctgcg tcacaactcc 3720 atggacatac tttaacttta atcaatacag ctgtcacttc tcaccacagg attggcagcg 3780 ccttacaaat gaatataagc gcttcagacc taaagcaatg caagtaaaga tttacaactt 3840 gcaaataaaa caaatacttt caaatggtgc tgacacaaca tacaacaatg acctcacagc 3900 tggcgttcac atcttttgtg atggagagca tgcttaccca aatgcatctc atccatggga 3960 tgaggacgtc atgcctgatc ttccatacaa gacctggaaa ctttttcaat atggatatat 4020 tcctattgaa aatgaactcg cagatcttga tggaaatgca gctggaggca atgctacaga 4080 aaaagcactt ctgtatcaga tgcctttttt tctacttgaa aacagtgacc accaagtact 4140 tagaactggt gagagcactg aatttacttt taactttgac tgtgaatggg ttaacaatga 4200 aagagcatac attcctcctg gactaatgtt taatccaaaa gtcccaacaa gaagagttca 4260 gtacataaga caaaacggaa gcacagcagc cagcacaggc agaattcagc catactcaaa 4320 accaacaagc tggatgacag gacctggcct gctcagtgca caaagagtag gaccacagtc 4380 atcagacact gctccattca tggtttgcac taacccagaa ggaacacaca taaacacagg 4440 tgctgcagga tttggatctg gctttgatcc tccaaacgga tgtctggcac caactaacct 4500 agaatacaaa cttcagtggt accagacacc agaaggaaca ggaaataatg gaaacataat 4560 tgcaaaccca tcactctcaa tgcttagaga ccaactccta tacaaaggaa accaaaccac 4620 atacaatcta gtgggggaca tatggatgtt tccaaatcaa gtctgggaca gatttcctat 4680 caccagagaa aatccaatct ggtgcaaaaa accaagggct gacaaacaca caatcatgga 4740 tccatttgat ggatcaattg caatggatca tcctccaggc actattttta taaaaatggc 4800 aaaaattcca gttccaactg cctcaaatgc agactcatac ctaaacatat actgtactgg 4860 acaagtcagc tgtgaaattg tatgggaggt agaaagatac gcaacaaaga actggcgtcc 4920 agaaagaaga catactgcac tcgggatgtc actgggagga gagagcaact acacgcctac 4980 ataccacgtg gatccaacag gagcatacat ccagcccacg tcatatgatc agtgtatgcc 5040 agtaaaaaca aacatcaata aagtgttgta atcttataag cctctttttt gcttctgctt 5100 acaagttcct cctcaatgga caagcggaaa gtgaagggtg actgtagtcc tgagctcatg 5160 ggttcaagac cacagcccga tggtagtggt gttaccgtct cgaacctagc cgacagccct 5220 tgtacattgt ggggggagct gttttgtttg cttatgcaat cgcgaaactc tatatctttt 5280 aatgtgttgt tgttgtaca 5299 //