ID D86636; SV 1; linear; genomic RNA; STD; VRL; 5600 BP. XX AC D86636; XX DT 30-NOV-1998 (Rel. 57, Created) DT 09-JUN-2006 (Rel. 88, Last updated, Version 4) XX DE Broad bean necrosis virus genes for 150KDa protein, 209KDa protein, DE complete cds. XX KW . XX OS Broad bean necrosis virus OC Viruses; Riboviria; Virgaviridae; Pomovirus. XX RN [1] RP 1-5600 RA Namba S.; RT ; RL Submitted (19-JUL-1996) to the INSDC. RL Shigetou Namba, The University of Tokyo, Laboratory of Bioresource RL Technology, Graduate School of Agricultural and Life Sciences; 1-1-1 RL Midori-cho, Tanashi, Tokyo 188, Japan (Tel:81-424-69-3125, RL Fax:81-424-69-8786) XX RN [2] RX DOI; 10.1007/s007050050379. RX PUBMED; 9722878. RA Lu X., Yamamoto S., Tanaka M., Hibi T., Namba S.; RT "The genome organization of the broad bean necrosis virus (BBNV)"; RL Arch. Virol. 143(7):1335-1348(1998). XX DR MD5; 094e2b47d459145e0c847cbd043220f5. XX FH Key Location/Qualifiers FH FT source 1..5600 FT /organism="Broad bean necrosis virus" FT /segment="1" FT /mol_type="genomic RNA" FT /db_xref="taxon:79918" FT CDS 80..5545 FT /codon_start=1 FT /transl_except=(pos:3998..4000,aa:OTHER) FT /product="209KDa protein" FT /note="including RNA-dependent RNA polymerase motif" FT /note="readthrough pos:3998..4000, UGA (opal) stop codon" FT /note="readthrough product" FT /db_xref="GOA:Q9YPH5" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR013664" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:Q9YPH5" FT /protein_id="BAA34692.2" FT /translation="MHNTLCEDATAQVKEALEEAKKKHKINVRRNISQEQVQLLNSLYP FT ERHIDTDGSSRGTHNMAAASRKIETDIILSWFPTGAWIFDIGGNWATHACRRDERKIHC FT CCPILDYRDAQRKTTRVLRIEKLVEEINMVTSTGRKIQRILEDEEIISSNIKAGKFNSE FT DMNGMWYCQNKFENCVFKPEGRAYAMAIHSIYDIDLHELVDALEEKEIKLMYGTFLFNV FT DMLLGKQSGVMKSFDGMYRIEGEYVKYWFGDDPNCGYKHNLQNLLKYITKTFVKAKGGS FT VYYLELKEQRGDVMFFTLTDATEASRCGITEDESFKCLPLDYKNKVIFPLFNLDEKTGE FT LKFEEEIYPLDFVNRILEYTGRLKENQLNFQHLMTYLASTNNAIVINGNSRSQVNTKVD FT PQVLMGISTTLIVHSEVQRRQQEAVLKELRLRVKENVDIKDVFTHTMSKLFGKQKFCQK FT YAKMFANWLNYAHGENLVSLKAVPMYIEVQDRLSIWMRAARQSNTFAITYEEVDLQIRK FT YEEFEREKKRVASQMVKDRLVAKNLNGDVFSVLSAITEDVSDDVDETLEEVQAYSEQEP FT KEGEISGVFVQKWINGEVSWSKSEKEVNYSWVDKALSCFLPDYRFSEVYRSDLITEGLS FT ENESVSQVNDTSVDISQITETIAEEEELDIIIDLRIVTAKACDDNDDEDIIDMFLNDLE FT YTTDDFEENAADNFVGAFDNIIQLAEEEEKAMENINLDGAEFKSVSTASNEDVAEPLIE FT IQIPVLPIISEEQCDDSKRKANAEDVSVVTAVADVLSTSSICSEDVQNIEDEPESSGLK FT MSWASDEEIESSLIELPEILDMTVCYGRLAAKPKYADSESRVERAKKEYLWYLHCKFVS FT DKSSMFDIIRDFVIGMYWTKQCAMPKDAVFLDYRENDYGQWFLGKEPLRLGHAYGVSFS FT LKTDCELGFPHNVLDCQIIPLSWEKDKKGYILSDRPCSKKKNSLLMMCDTTYLMNEMII FT YQNCMRVLKTRKTKRKARITLIDGVPGCGKSTYIVNNADVRTDLILSMGKEATEDLKRR FT FTKEKGARQEDMKRVRTVDSYLLNDFGNKLRADTVHFDEALMAHAGMVYFIAMMCSAKR FT IKCQGDSKQIPFINRVESIKLEYAKLDIHETIAKRLTYRSPLDVAYYLTKKGFYGLDFI FT TSANPLLRSMKTVGPRSSTPMSSIYVIPKTKGASYLTFTQTEKDEMKQYLGSGDWTVNT FT VHEAQGKTFNDVILVRLKNTENEIYPGGRNSEPYMVTGISRHKRSLIYYTRAEDKLWSD FT ITDMMEVMDGKLQKHLYEEGPKXRCGSKFESIQVMDRKVCVPDVGNITIMQDFFDVVFP FT GNSCIDTFFDGYEVATGGLDIELSDCKIYPNRPMKVWEERRYLSPVLRTAMPNKRQSSQ FT AESLLALKKRNMAAPRLQESVNEFEIIENTISKAKRVFLNEDLIDCSPISNIEASQRWW FT QNQSEQAKKQLIAETKILSEIDVGVYNFMIKRDVKPKLDLSPQSEYGALQTVVYPDKIV FT NALFGPVIKEINERIIHALKPHVIYNTRMTAAEMDRSLEFLNVYEDYDSVEIDFRKFDK FT SKVSLHIKVVIELYKLFGLDDMLAVLWEKSQCQTLVKDRINGVQAYLLYQQKSGNCDTY FT GSNTWSAALALLDCMPLEKLRPMISGGDDSLFFFKKGITIEDPCRRLSSLWNFDCKLFD FT FENEAFCGKFLLKIGDNFRMAPDAIKFLVKLGKDSIPDVQTLFEVFTSVQDNYRSYDDY FT RILEAMNVSMIERYKIPHCGLGFLCSVKKYISSFELFASLYNVKVDKALLRQINTNVVV FT NRNFDW" FT CDS 80..4000 FT /codon_start=1 FT /product="150KDa protein" FT /note="including methyltransferase and helicase domain" FT /db_xref="GOA:Q9WK10" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR013664" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:Q9WK10" FT /protein_id="BAA34693.1" FT /translation="MHNTLCEDATAQVKEALEEAKKKHKINVRRNISQEQVQLLNSLYP FT ERHIDTDGSSRGTHNMAAASRKIETDIILSWFPTGAWIFDIGGNWATHACRRDERKIHC FT CCPILDYRDAQRKTTRVLRIEKLVEEINMVTSTGRKIQRILEDEEIISSNIKAGKFNSE FT DMNGMWYCQNKFENCVFKPEGRAYAMAIHSIYDIDLHELVDALEEKEIKLMYGTFLFNV FT DMLLGKQSGVMKSFDGMYRIEGEYVKYWFGDDPNCGYKHNLQNLLKYITKTFVKAKGGS FT VYYLELKEQRGDVMFFTLTDATEASRCGITEDESFKCLPLDYKNKVIFPLFNLDEKTGE FT LKFEEEIYPLDFVNRILEYTGRLKENQLNFQHLMTYLASTNNAIVINGNSRSQVNTKVD FT PQVLMGISTTLIVHSEVQRRQQEAVLKELRLRVKENVDIKDVFTHTMSKLFGKQKFCQK FT YAKMFANWLNYAHGENLVSLKAVPMYIEVQDRLSIWMRAARQSNTFAITYEEVDLQIRK FT YEEFEREKKRVASQMVKDRLVAKNLNGDVFSVLSAITEDVSDDVDETLEEVQAYSEQEP FT KEGEISGVFVQKWINGEVSWSKSEKEVNYSWVDKALSCFLPDYRFSEVYRSDLITEGLS FT ENESVSQVNDTSVDISQITETIAEEEELDIIIDLRIVTAKACDDNDDEDIIDMFLNDLE FT YTTDDFEENAADNFVGAFDNIIQLAEEEEKAMENINLDGAEFKSVSTASNEDVAEPLIE FT IQIPVLPIISEEQCDDSKRKANAEDVSVVTAVADVLSTSSICSEDVQNIEDEPESSGLK FT MSWASDEEIESSLIELPEILDMTVCYGRLAAKPKYADSESRVERAKKEYLWYLHCKFVS FT DKSSMFDIIRDFVIGMYWTKQCAMPKDAVFLDYRENDYGQWFLGKEPLRLGHAYGVSFS FT LKTDCELGFPHNVLDCQIIPLSWEKDKKGYILSDRPCSKKKNSLLMMCDTTYLMNEMII FT YQNCMRVLKTRKTKRKARITLIDGVPGCGKSTYIVNNADVRTDLILSMGKEATEDLKRR FT FTKEKGARQEDMKRVRTVDSYLLNDFGNKLRADTVHFDEALMAHAGMVYFIAMMCSAKR FT IKCQGDSKQIPFINRVESIKLEYAKLDIHETIAKRLTYRSPLDVAYYLTKKGFYGLDFI FT TSANPLLRSMKTVGPRSSTPMSSIYVIPKTKGASYLTFTQTEKDEMKQYLGSGDWTVNT FT VHEAQGKTFNDVILVRLKNTENEIYPGGRNSEPYMVTGISRHKRSLIYYTRAEDKLWSD FT ITDMMEVMDGKLQKHLYEEGPK" XX SQ Sequence 5600 BP; 1767 A; 736 C; 1360 G; 1737 T; 0 other; tggaattcta gatatcattc gtgatgaaga agttgttcgt gctgttgtta atgctggtgc 60 tagtaaaatc ggatcacata tgcataacac attgtgtgaa gatgctacag cgcaagtgaa 120 ggaagctttg gaagaagcga agaagaaaca caaaataaat gttcggagga acatatcaca 180 agaacaagtg caactgttga attcgttata ccccgagaga catattgata cagatggaag 240 ttcaagaggt actcataaca tggcagccgc gtctagaaaa attgaaactg atattatctt 300 atcctggttt ccaacaggag cctggatttt tgatattggt ggaaattggg cgacgcatgc 360 atgtagaaga gatgaaagaa aaatacattg ctgttgtcct atacttgatt atcgcgatgc 420 gcagagaaaa actaccagag tattgagaat tgagaaactt gttgaagaga taaatatggt 480 gaccagcact ggtagaaaaa ttcaaagaat tttggaggat gaagagatca tttcttcgaa 540 tatcaaagct ggaaaattca attccgaaga tatgaatggt atgtggtatt gtcagaacaa 600 gttcgagaat tgtgtcttta agcctgaagg aagggcttat gcgatggcta ttcatagtat 660 ctatgatata gacttgcatg aacttgtgga cgcattggaa gagaaagaga taaagttgat 720 gtatggcaca tttctgttta atgtggatat gttgttaggc aaacagagtg gtgttatgaa 780 gagctttgat ggaatgtacc ggattgaagg tgagtatgtg aagtactggt ttggtgatga 840 tcctaactgt ggttataagc ataacttgca gaatctgttg aagtatataa caaaaacatt 900 tgtgaaagcc aaaggtggga gtgtctatta tttggaactg aaagagcaaa gaggtgatgt 960 catgtttttt actttgacag atgctacaga agcaagtaga tgtggcataa cagaagacga 1020 atcgtttaaa tgtttgccat tggactacaa aaacaaagtg atttttcctt tgtttaacct 1080 tgatgagaag actggtgagt tgaaatttga ggaagaaata tatccattag attttgttaa 1140 cagaatcttg gaatatacgg ggagattgaa ggaaaaccag ttgaatttcc aacatctgat 1200 gacttacttg gcctctacga acaatgctat tgtgataaat ggtaattcaa ggagtcaggt 1260 gaatacgaaa gtggatccac aggtgttgat gggaatttcc actacgctaa ttgtacattc 1320 tgaagtgcag aggagacaac aagaagctgt gctgaaagaa ttgcgcttga gagtgaagga 1380 gaatgtggat atcaaggatg tgtttactca tactatgagt aaattgttcg gaaagcaaaa 1440 attttgtcaa aagtacgcta agatgtttgc taattggttg aattatgctc atggagaaaa 1500 tctagtgagt ttgaaagccg tacccatgta cattgaggta caggataggt tatctatttg 1560 gatgcgtgca gcgcgtcagt caaatacgtt tgcaataacg tatgaagaag ttgacctgca 1620 gattagaaag tacgaggagt ttgaaagaga aaagaaaagg gtggccagtc aaatggtcaa 1680 agaccgactc gttgcgaaaa atctgaatgg tgatgttttt tctgtgttga gtgcgattac 1740 agaagatgtt tctgatgatg ttgatgagac attggaagag gtgcaagcct actctgaaca 1800 agaacctaaa gaaggagaaa tttctggggt ttttgtacaa aaatggatta atggtgaagt 1860 atcatggtca aaaagtgaga aggaagtcaa ttatagttgg gttgataaag cgttgagctg 1920 ctttttaccc gattacagat tctctgaagt ttaccgttca gatttgatta ctgaagggtt 1980 aagcgaaaac gagagtgtga gtcaagtcaa cgatacatct gttgatatca gtcagattac 2040 tgagactatt gctgaagaag aagagctgga tataatcatt gatttgagga ttgttactgc 2100 gaaagcgtgt gacgataatg acgatgagga tatcattgat atgtttttga atgatcttga 2160 gtatacgact gatgactttg aagaaaatgc tgctgataac tttgttggag cttttgataa 2220 tattattcag cttgctgaag aagaagaaaa agctatggag aatatcaatc ttgatggtgc 2280 tgaatttaaa tctgtttcca cggctagcaa tgaagacgtg gctgaacctt taattgaaat 2340 tcaaatacct gtcttaccta tcatttctga agaacaatgc gatgattcaa aacgaaaagc 2400 taatgctgaa gatgtttcgg ttgtgacggc cgttgcagat gtcttgtcaa cttcgtctat 2460 ttgttctgaa gacgttcaaa atattgaaga tgaaccagag agttcagggt tgaaaatgag 2520 ttgggcgagt gatgaggaga ttgaaagttc tttgattgaa ttacctgaaa ttttggatat 2580 gactgtgtgt tatggtaggc ttgctgccaa acctaaatat gcagattctg agagtagggt 2640 tgagagagcg aagaaggaat acttgtggta tttgcactgt aaatttgttt cagataaatc 2700 tagtatgttc gacattatca gggattttgt tattggaatg tattggacga aacagtgtgc 2760 tatgccaaag gatgcagtgt ttttggacta ccgtgagaat gactatggtc aatggttttt 2820 gggcaaagag cccttgagat taggacacgc gtatggtgtg tctttcagtt tgaaaaccga 2880 ctgcgagtta ggctttcctc ataacgtgct tgattgtcaa atcattccgt tatcttggga 2940 gaaggataag aagggttata ttctaagtga caggccttgc tctaagaaga aaaacagttt 3000 gttgatgatg tgtgatacta cttatttgat gaatgagatg attatctatc agaattgcat 3060 gcgtgtttta aaaacaagaa aaacaaagag gaaggctagg ataactttga tcgatggtgt 3120 gccaggttgt ggtaaatcta catacatagt gaataatgcc gacgtgcgaa cggacttgat 3180 cctttccatg ggcaaagaag ccacagaaga tttgaagcgt agatttacca aagaaaaggg 3240 ggctcgtcag gaagacatga aaagagtgag aactgttgat tcttatttgt tgaatgattt 3300 tggtaacaaa ttgagagccg atacagtgca ctttgatgag gctcttatgg ctcacgctgg 3360 tatggtttat ttcattgcta tgatgtgttc tgcaaaaagg attaagtgtc agggtgattc 3420 caaacagata cctttcatta atagggttga gtcaattaaa cttgaatatg ccaaattgga 3480 tattcatgaa actattgcaa agagattgac ttacagatca cccttggatg ttgcatacta 3540 tttaacaaag aaaggttttt atggtttgga ttttatcact agtgctaatc ctttgttgcg 3600 ttctatgaag acagttggac caaggagttc tactcctatg agttcaattt atgtgattcc 3660 aaagaccaaa ggtgcgagtt atttgacatt tactcaaacc gagaaagatg agatgaagca 3720 gtatcttggt tcaggtgatt ggactgtgaa tacagttcat gaagcgcagg gaaaaacttt 3780 taatgatgtc attttggtga gattgaagaa tactgaaaat gagatatatc ctggtggcag 3840 gaattctgaa ccatacatgg ttacgggtat ttctaggcat aaaaggagct tgatatacta 3900 cacaagagct gaagataaat tgtggagtga tattacagac atgatggagg tcatggatgg 3960 aaaattgcag aagcatttat atgaggaagg tcctaaatga cggtgtgggt cgaaatttga 4020 atctatacaa gtgatggata ggaaagtctg tgtacctgat gtcggtaaca ttacgattat 4080 gcaggatttt ttcgacgttg tatttcctgg aaattcttgt attgatacat ttttcgacgg 4140 gtatgaagtt gcgactggtg gtcttgatat cgagttgtct gattgtaaga tctatcctaa 4200 cagacctatg aaggtctggg aagagagacg ttacttgtca cctgtgttga gaactgctat 4260 gcctaataaa aggcaaagta gtcaagctga aagtttgctt gctttaaaaa aacgaaacat 4320 ggccgcgcct aggctacaag aaagtgtgaa tgagtttgag attattgaaa acacaatcag 4380 taaggcaaag agagtttttt taaatgaaga tctgattgat tgttctccga ttagtaatat 4440 tgaagcctct cagaggtggt ggcagaatca atctgagcag gcgaagaaac aattgatcgc 4500 agaaacaaaa attctcagtg aaattgatgt aggtgtctat aatttcatga ttaagcgtga 4560 tgttaagcct aaacttgact tatcacctca atctgaatat ggtgctttgc agacagttgt 4620 ttatcctgat aaaattgtga atgcgctttt tggacctgtc attaaagaaa taaatgagcg 4680 tatcattcat gcattgaaac ctcatgttat ttataacacg cgtatgacag cggctgaaat 4740 ggacagatca ttagaatttt tgaatgtata tgaagattac gacagtgtgg agattgattt 4800 tagaaaattt gacaaatcta aggtgtccct ccatatcaaa gttgtgattg aattgtacaa 4860 actttttggt cttgatgaca tgttggctgt gttgtgggaa aaatctcaat gccaaacttt 4920 ggtgaaagat aggattaatg gtgttcaagc ttatttgctg tatcagcaga aatcaggaaa 4980 ttgtgatact tatggttcga atacttggtc ggctgctttg gcattacttg attgtatgcc 5040 tttggagaag ctgaggccta tgatttccgg tggagatgat tcgttattct tttttaaaaa 5100 ggggataacg attgaagatc catgtcggag attgtcgtct ttgtggaatt tcgattgtaa 5160 gttgtttgat tttgaaaatg aagcattctg tggtaagttt ttattgaaaa ttggtgataa 5220 ttttagaatg gctccggatg ctataaaatt tcttgtgaaa cttggtaaag attctatacc 5280 agatgtgcaa actttgtttg aagtttttac gtctgtgcaa gataattacc gttcatatga 5340 tgattatagg attttggagg ctatgaatgt ttctatgata gaaaggtata agataccaca 5400 ttgtggttta ggttttttgt gttctgtgaa gaagtatatt tcctctttcg aattgtttgc 5460 aagtttatat aatgttaaag tcgataaagc gttgctgcgt caaattaata ctaacgttgt 5520 tgttaataga aattttgatt ggtagtttta tgtgtcttaa taaaaagatg aggttttaag 5580 ggttaaattc ccttgagagt 5600 //