ID D86634; SV 1; linear; genomic RNA; STD; VRL; 7636 BP. XX AC D86634; XX DT 11-JUN-1998 (Rel. 56, Created) DT 22-APR-2005 (Rel. 83, Last updated, Version 5) XX DE Wheat yellow mosaic virus genomic RNA, complete sequence of RNA1. XX KW . XX OS Wheat yellow mosaic virus OC Viruses; Riboviria; Potyviridae; Bymovirus. XX RN [1] RP 1-7636 RA Namba S.; RT ; RL Submitted (19-JUL-1996) to the INSDC. RL Shigetou Namba, The University of Tokyo, Laboratory of Bioresource RL Technology, Graduate School of Agricultural and Life Sciences; 1-1-1 RL Midori-cho, Tanashi, Tokyo, 188, Japan (Tel:81-424-69-3125, RL Fax:81-424-69-8786) XX RN [2] RX DOI; 10.1007/s007050050319. RX PUBMED; 9638137. RA Namba S., Kashiwazaki S., Lu X., Tamura M., Tsuchizaki T.; RT "Complete nucleotide sequence of wheat yellow mosaic bymovirus genomic RT RNAs"; RL Arch. Virol. 143(4):631-643(1998). XX DR MD5; 173b46e92571684df98e60dc297a1cc3. XX FH Key Location/Qualifiers FH FT source 1..7636 FT /organism="Wheat yellow mosaic virus" FT /segment="1" FT /mol_type="genomic RNA" FT /db_xref="taxon:75746" FT CDS 163..7377 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="GOA:O90733" FT /db_xref="InterPro:IPR001205" FT /db_xref="InterPro:IPR001592" FT /db_xref="InterPro:IPR001650" FT /db_xref="InterPro:IPR001730" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR009003" FT /db_xref="InterPro:IPR013648" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:O90733" FT /protein_id="BAA28768.1" FT /translation="MEQTAAQTAAHHGTHTNSAQEQPPVSPMNLSANFVAPELFYGSNV FT EKIKSIIKMRSTTRIIDAISRDFELVAFLILSAAHLMQLETTLRCEMRSSIVPIANSDA FT GFETCAVLKTALDGMKYHFGTTTLEQGWTSMMRHADSCLQESSSSAVAMLQTQVQKVGS FT LLISGKNRVESCELYVLHLTARAFRTEYGLKGTCFGEHCALLHDLKACVCGTVPKEFLW FT AKTKKHSMFTIPEWIARTPTDCFMLCLRAIPIFRRCTMAMSLLYWSCVATVNFPSVMAF FT LFKRQFTKYIAHSFGKHSIYFLMLGIVALLWAFRTYASKNPKIALQGRSANEKEKKLMM FT LLASAVGITYLFDYDIAEALGNSLHKISRLSSYLMDDHQGIASRMFSASYGLQAGDNTE FT DAVTTIISDLLSVTFQIVEEDTTAGVLEEVSDTTFSSWVSVNTIAGRNMSRPLQYPVNQ FT TYPLTPMNGWMQAQAMVDSDNCWSMVVGHTVSGKSTFLPVQYSNYLAKKLDRRQQILVC FT EPTQAATENVCSGIAANLGRAVYGRHEGWSRMGDHCIQVMTYGSALQCHAMDPGFISTF FT DAIFLDEAHDVKEHSLFFESICNNFTSVRKFYVSETPRDGSSCPDATRKFPLTGQQSVC FT DSYKKFIAAQGGDDLLDVTKYDTVLVFLAGRPECVKAANAWNASITGEKRAFSLSSDNF FT ATDFAMLTERLKTHKPIIFTTNIIETGVTLSVDCVVDFGYTMRPSLDLNHKTLRLERRR FT VTANERKQRIGRAGRLKEGHAIVCGDEDRSVNVVSPDVLYGAALLSFKHNVPFYMNDTF FT ESSWLEGITKSQADTMTIFKLPIFLTRDLVNSDGSVVKEFLDILKKYQFTTSDIKQAPH FT SIARHLFPTWASYFALFQSLTYGEEKDEIPQESRHARVPFSISTLSKFDWNALALACEQ FT HRPTVISSFQGLDQPARVVTLQTNSANILGSIAHLCNMRNNYKALIDSNNHVKQSMATN FT VMFKWFSSSRITADLDRNLSRCLANLSVVETTISSLKQISAGNSQVMASPILQSHLENI FT IELQSNDMLTDETLSNALGIFNPKTNLFLLLATKGFKLVYVICLLIFINLIYRLLSHWR FT AWLKNKYDNGNPDALTNTMTVQEGSEILKEVLKMTPAMRREVTKDMKVAVADNNSTFSF FT VFPDEHIDLEGKGNKYRPREDARLMYSTRDDATFDTWNEKAKEKRKKISDRAEPEMKQP FT HQKRPYYNFYDLHTDSNILEAIFYTTEGDEFFRSAKSHQDMHSVTVKLKAFLDPKPIIG FT RHQRQLLEETAQVVIKDDKGTAHRMDISTHNPNTLKNNGSGRVGYDEHRGDFRQESPAL FT ESPYELEAEFGNSKDEVMLEASTGILLSQVSVDVATRIGRISIGTFNVNCFLYSDWILA FT PAHFQDRNGAVTIEFPDQTVSTTTDNLNAHGVKRFYGLDLIAIRRPPSLRPEKKLVKAF FT AITEPVLAQMVFIDSQGIRKFSQSDWIRQEAGSNRWSHKISTQNGMCGCPVLDVGKNRL FT IGIHVATNRTTGRNEFQPFTREAVDFINGPGNKVPFSPWTFNRPACGYKQGEATFASRT FT IQNQGSDTLSKINNSILGFGSDLKGQLVQPVTPALRTRFEALFGGGSFELVGTMNKGLI FT DKHTIVGENDNVHDFMREHPTFAWLQGFMDEYAPSVLNYSAYYKDLCKYNRKKHQLSFN FT PHELRSATAGMIRMLEDAGLTQGDVRTPQQVVSDMQWNTSAGPSYQGKKRDVCAHLSEQ FT EVLHLAETSRQQFLACNSIGIWNGSLKAELRTIEKVEAEKTRVFTASPITSLFAMKFYV FT DDFNKKFYATNLRAPHTVGINKFSRGWEMLHDKLNRPGWLHGSGDGSRFDSSIDPFFFD FT IIKEIRKHFLPVEHHRAIDLIYDEILNTNICLANGMVIRKNVGNNSGQPSTVVDNTLVL FT MVSFLYGYIHKTGDHMLKKLNDRFVFVCNGDDNKFAISPEFDAEFGHDFSPELTELGLT FT YEFDDITDDICANPYMSLTMVRTPFGIGFSLPVERIVAIMQWAKKGGVLHSYLAGISAI FT YESFNTPKLFKSVYAYLLWLTEEHGSDILAAMTGTETALPIPSMLDVYRLHYGDSSIEL FT QAADTQTDAQKEEARLAAATKKAADDADAARLRKVEADRVEAARVKKASDDKKARDLTA FT TKVDDGKIVADAGTKRTNAATKEKWSLPETKPVNAGLKLRISMDKLKSAPKSIIEHDNS FT IALDSEVKTWSDAVRTSLGITTDEAWINGLIPFLGWCANSGASDKHAENQTMQVDNGTG FT ALTEMSLSPFIVHARLNGGLRRILRAYSDETVLLLQEHKIVTKWAMKHGASAHAAYAFD FT FFVPRPWMNPQDIEVAKQARLAALGTGTYNTMLTSDTTNLRKTTNRRVLDTDGHPELT" FT mat_peptide 163..1143 FT /product="36k protein" FT /note="zinc finger domain" FT mat_peptide 1144..1341 FT /product="7K protein" FT mat_peptide 1342..3318 FT /product="73K protein" FT /note="helicase domain" FT mat_peptide 3319..4911 FT /product="60K protein" FT /note="Nla proteinase domain" FT mat_peptide 4912..6495 FT /product="59K protein" FT /note="polymerase domain" FT mat_peptide 6496..7374 FT /product="32K protein" FT /note="capsid protein" FT polyA_site 7635 XX SQ Sequence 7636 BP; 2164 A; 2018 C; 1689 G; 1765 T; 0 other; aaaaaataaa taacacagac caaaaccatc aaaacgatca caagccaaca cataccttct 60 gcttcctttt gagcccaagc tttcgtctct caatcccctc gcgacgcctc actctttcca 120 atcgagcccc tcggctctgc cttcttcttc actcccttcg agatggagca gacagcagcc 180 cagaccgccg cgcatcacgg cacacacacg aactccgcac aagagcagcc tcctgtcagc 240 cctatgaatc tgtctgcaaa ctttgttgcc cctgagcttt tctacggttc aaatgtcgag 300 aagatcaaga gtatcataaa gatgcgtagc acgacgcgca tcattgatgc gatatccagg 360 gatttcgaac ttgttgcttt tctcatactc agcgccgcac atctcatgca gctagaaacc 420 acactacgct gcgagatgag atccagcatt gtacctattg caaactcaga tgctggtttt 480 gagacttgcg ccgtcctcaa aacagcgctc gatggaatga agtatcactt tggaacaacc 540 acactcgagc aaggctggac atccatgatg agacacgctg acagctgcct gcaagagagt 600 tcttcctctg ccgtcgccat gttacaaact caagtccaga aagtcggctc cctcttaatc 660 agcggaaaaa atcgcgtaga aagttgcgaa ctttatgtct tacacctcac cgcgcgcgct 720 ttcaggaccg aatatggatt aaagggtact tgctttggag aacactgcgc tttgctgcac 780 gacttaaaag catgcgtttg tggtaccgtg ccaaaagagt ttttgtgggc gaaaaccaaa 840 aagcactcca tgttcactat cccagagtgg atcgcacgta cgccaacaga ctgtttcatg 900 ctgtgtcttc gcgctatacc tatctttcgt aggtgtacga tggcaatgtc tttactttat 960 tggtcgtgtg tagcaactgt taacttccct tctgttatgg cttttctttt taagcgtcag 1020 ttcactaaat acatagctca ttccttcggc aagcactcca tctatttcct tatgctaggt 1080 attgtagccc tactatgggc attccgcact tatgcttcga aaaacccaaa aatagctctc 1140 caaggtagga gcgcaaacga gaaggaaaag aaactgatga tgttactcgc aagcgccgtt 1200 ggaatcacat atctatttga ctacgacatc gcagaagccc tagggaattc tctccataaa 1260 ataagtcgct tgtcgtctta tctaatggat gatcatcaag gaatagcctc tcgcatgttt 1320 agcgctagct acggacttca agctggggac aatacggagg atgcagtcac cacaatcatt 1380 agtgatctct tgtctgtcac ctttcaaatt gtcgaagaag atacaactgc tggagtttta 1440 gaagaggtca gcgacacaac tttcagtagt tgggttagcg ttaacactat cgctggaagg 1500 aacatgtcac gccccctgca ataccctgtg aatcagactt acccactcac accaatgaac 1560 gggtggatgc aagctcaagc tatggtcgat tcggacaact gttggtcaat ggtcgttgga 1620 cacacggtat ctggaaaatc cacgtttctt cctgtccagt actctaacta ccttgccaag 1680 aaacttgacc gtcgccaaca aattctagtt tgcgagccta cgcaagcagc cacagaaaat 1740 gtctgctcag gaattgctgc caacttaggg agagctgtgt atggaaggca tgaaggttgg 1800 tcgcgcatgg gagatcactg cattcaagtt atgacctacg gatcagctct acagtgccac 1860 gcaatggatc caggcttcat atcaaccttt gacgcaatat tccttgatga ggctcacgat 1920 gtcaaggagc attcactttt cttcgagagc atctgcaaca acttcacgtc tgttagaaag 1980 ttctacgtat cagaaacccc ccgagatggg agctcatgcc cggatgcaac acgcaaattc 2040 cctctaacag gtcagcagag tgtgtgcgat tcatataaga aattcatagc cgcacaaggt 2100 ggagacgatc ttctcgacgt cactaaatac gacaccgttc ttgtttttct cgctggaaga 2160 ccagaatgcg tcaaagctgc aaatgcatgg aatgctagca ttactggaga aaagcgagct 2220 ttctcgctat caagcgacaa cttcgccacc gattttgcaa tgctaacgga gcgcctcaaa 2280 acgcacaaac ccatcatctt cacaacgaac atcatcgaaa ctggtgttac ccttagcgtt 2340 gactgtgttg ttgactttgg ctataccatg cgaccctccc tcgatctaaa ccacaaaacg 2400 ctacgccttg agcgccgtag agtgactgca aatgagagaa agcaaaggat tggtagagct 2460 gggcgtctca aggaaggaca tgccattgtg tgtggtgatg aagatcgatc tgtcaatgtc 2520 gtctccccgg atgttctgta tggtgccgcg cttcttagct tcaagcacaa tgtgcccttc 2580 tacatgaacg acacctttga aagctcgtgg cttgaaggaa ttactaagtc tcaggctgac 2640 actatgacaa ttttcaagct ccccatattc ctaacgcgcg atcttgttaa ctccgatggc 2700 tctgtagtaa aggagttcct cgatattctg aagaagtacc agttcacaac gagcgacatc 2760 aagcaagcgc cacacagcat agctcgtcac ctctttccaa cttgggcctc atactttgca 2820 ctcttccaat cactcaccta cggcgaggag aaagatgaga tcccccagga atctcgtcat 2880 gcgcgagttc ccttctccat ttcaacgctg tctaaattcg actggaatgc cttggcgctt 2940 gcatgtgagc agcatcgccc aacagtgata agctcattcc aaggccttga tcagccagcc 3000 cgcgttgtca ccctacaaac aaactctgca aacatcctcg gaagcatcgc ccatctctgc 3060 aacatgcgta acaattacaa agccttgatt gacagcaaca accatgtgaa gcaatcaatg 3120 gcaaccaacg tcatgttcaa gtggttctca tcatcccgca tcacagctga tcttgacaga 3180 aacttatccc gatgcttagc caacttgtca gttgtggaaa ccacgattag ctcgctaaag 3240 cagatctcag ctggaaactc gcaggtgatg gcctctccaa tacttcagag tcacctagag 3300 aacataatcg aactacaatc aaacgacatg ttgactgatg agacactgtc aaacgctcta 3360 ggcattttca acccaaagac caacctcttc ctccttctcg caaccaaagg ttttaaactt 3420 gtttacgtta tctgcctgct tatattcata aacctcatct accgcttgct ctcccactgg 3480 agagcttggt tgaagaacaa gtacgataac gggaaccccg atgcccttac caacaccatg 3540 acagttcagg aaggaagcga aattctcaag gaggtattga agatgactcc agcgatgcgc 3600 agggaggtga ccaaggatat gaaagttgca gttgctgata acaacagcac attctctttc 3660 gtgttccctg acgaacacat tgacctcgag ggaaagggaa acaagtatcg accacgagag 3720 gacgcacgtc tgatgtactc cacgagagac gacgcaacct tcgatacatg gaacgagaaa 3780 gctaaggaga aaaggaagaa gatatcagac cgcgcagagc cagagatgaa acaaccgcac 3840 cagaagcgtc catactataa cttctacgac cttcatactg atagcaacat tctcgaggca 3900 atattctaca ccacggaagg tgacgaattc ttccggagcg ccaaatccca ccaggacatg 3960 cactcagtaa ctgtaaaact aaaagccttc cttgacccaa aaccaatcat aggcagacac 4020 cagcgccagc tccttgagga aaccgctcag gtcgttatca aagacgacaa aggcactgcc 4080 cacagaatgg acatatcaac tcacaaccct aacactctta agaacaatgg atcaggaaga 4140 gttgggtatg acgagcatcg cggcgatttc aggcaagaga gccctgcact tgagtcaccg 4200 tacgagttgg aagctgaatt cggaaactca aaggatgaag tcatgcttga agcatcaaca 4260 ggaattctcc tatcccaggt cagcgttgat gttgcgactc gaattggaag aataagcatc 4320 ggaacgttca atgtcaattg cttcctctac agtgattgga tactagcacc tgctcatttt 4380 caggatcgaa acggcgccgt caccatcgag ttcccagatc aaacggtgag taccacaacc 4440 gacaatttaa atgcgcacgg tgtcaagcga ttttacggac ttgacctcat agccattcga 4500 agaccaccaa gcctccgacc tgagaaaaag ctcgttaaag cgttcgccat cacagagcca 4560 gtgctagcac agatggtctt cattgacagc caagggatcc gaaagttttc tcaatccgac 4620 tggatcagac aggaagctgg ctctaacaga tggtcacaca agatttcaac tcaaaatggg 4680 atgtgtggat gccctgtttt ggatgttgga aagaaccgtc tcattggaat tcacgttgcc 4740 acgaatcgca ccacaggacg aaatgaattc cagcccttca cacgcgaggc tgtcgacttc 4800 atcaacgggc caggaaacaa ggttcctttc agcccttgga cctttaaccg ccctgcctgt 4860 ggatacaagc aaggagaagc caccttcgct tcacgcacca tacagaacca aggctccgac 4920 actctcagca agatcaacaa ctccatcctt ggctttggaa gtgatttgaa aggccagctt 4980 gttcaacccg taacaccagc tctacgcact cgctttgaag ccctgtttgg tggtggaagc 5040 ttcgaactcg tcgggacaat gaacaaagga ctcatagaca aacacacaat tgttggggag 5100 aacgacaacg ttcatgattt catgagagag caccccactt tcgcttggct tcagggtttc 5160 atggatgaat acgcaccaag tgtcttgaac tactcggctt actacaagga tctttgcaag 5220 tacaatagga agaagcacca actctccttc aaccctcacg agcttcggag tgccaccgct 5280 ggaatgatca gaatgttgga agacgccggc ctaactcaag gcgacgtgag gacaccccaa 5340 caggttgttt cagacatgca gtggaacact tccgccggac caagctacca gggcaagaaa 5400 agagacgttt gcgcacatct cagcgagcag gaagttctac accttgcaga aacgtcgcga 5460 cagcagtttc tagcctgcaa ttccatcggc atttggaacg gatcgctcaa agcagagctt 5520 aggacgattg agaaagtgga agctgagaaa accagagttt tcacggcttc gccaatcacg 5580 agtttattcg ccatgaagtt ctacgttgac gatttcaaca agaagttcta tgcgacaaac 5640 ctgagagccc cacacacggt aggaatcaac aaattcagca gaggctggga aatgctccac 5700 gacaagctca accgcccagg ttggcttcac ggcagtggcg atgggtcacg atttgatagt 5760 tcaattgacc ctttcttctt cgacataatt aaggagattc gaaagcactt tctaccagtt 5820 gagcaccatc gcgcaatcga cctaatatac gacgagattc tcaacaccaa catttgtttg 5880 gcaaatggca tggtaattcg aaagaacgtt gggaataaca gcgggcagcc aagcacggtc 5940 gtagacaaca cacttgttct catggtctct tttctctacg gttacattca taaaaccggg 6000 gaccatatgc tcaagaaact caacgacaga tttgttttcg tctgcaatgg tgacgacaac 6060 aaatttgcca tttccccaga attcgacgcc gagttcggtc acgacttttc accggagctc 6120 acagagctag gtttgacgta cgagtttgac gacataacag atgacatctg tgcaaacccc 6180 tacatgtccc tgaccatggt ccgcactccc tttggaattg ggttttcatt gcccgtggaa 6240 cgcattgtag caataatgca gtgggctaag aagggcggcg ttctgcactc ttacttggca 6300 ggaatctcag ccatttacga aagcttcaac acaccaaagt tgttcaaatc agtctatgcg 6360 tatttgttat ggctgacaga ggaacacggc tctgacatcc tagctgcgat gaccggaaca 6420 gagacagctc tcccaattcc ctccatgctc gatgtgtacc gcctccacta tggtgatagc 6480 agcattgagc tccaagcagc tgacacacaa acagacgcgc agaaggagga agctcgactg 6540 gcagccgcca ccaagaaggc agccgatgat gccgacgctg cgcgtctccg caaggttgag 6600 gcagatcgtg ttgaggccgc aagagtgaag aaagcgagcg atgacaagaa agccagggac 6660 ctcacagcga ccaaggttga tgatggcaaa attgttgccg acgctggaac aaaaaggacc 6720 aatgccgcca ccaaagagaa atggtcactt ccagaaacaa aacccgtcaa cgcaggacta 6780 aagcttcgaa tctcaatgga caaattaaag agcgcaccca aatctataat cgaacacgac 6840 aactccatcg ctctagattc agaagttaag acgtggtcag acgctgtgcg gaccagtctt 6900 ggcatcacca cggatgaggc atggatcaat ggcctcattc ccttcctcgg atggtgcgcc 6960 aacagtggcg cttcagacaa acacgcagaa aaccagacca tgcaagttga caatggaact 7020 ggagctttaa ccgagatgag tctctcccca ttcattgttc acgctaggtt gaatggtggc 7080 ttgagacgga tcctgcgagc ctacagtgat gaaactgtgc tcctccttca ggaacacaag 7140 attgtcacaa aatgggctat gaaacacggc gcatctgcac acgccgcgta cgcttttgac 7200 ttctttgtcc cccgcccgtg gatgaaccca caggacatcg aagttgcgaa acaagcacgt 7260 cttgctgctt taggcacagg tacatacaat accatgctca cctccgacac aaccaacctc 7320 cgcaagacaa ccaaccgcag ggttctggat actgatggac acccagaact aacctaaacc 7380 atcacccccc tccgcctttt atatttgcac tttaaatttt cgcaaaccat caccaccttt 7440 cacggccacg gttacgatct ttaatttctg cacttgtatc aggctcggga cggttctatg 7500 cacaattatg cttcgacagt tgccaaacca gtattttcca cgaggaagag tatggcgagg 7560 cttgagcagc cgtttttaat catacgtcgt tgtatggtgg cgcattcagt gcgtttacga 7620 gtaccagaag gtaaca 7636 //