ID D86439; SV 1; linear; genomic RNA; STD; VRL; 3514 BP. XX AC D86439; XX DT 07-JAN-1998 (Rel. 54, Created) DT 30-MAR-2006 (Rel. 87, Last updated, Version 6) XX DE Rice gall dwarf virus genomic RNA, segment S2, complete sequence. XX KW . XX OS Rice gall dwarf virus OC Viruses; Riboviria; Reoviridae; Sedoreovirinae; Phytoreovirus. XX RN [1] RP 1-3514 RA Omura T.; RT ; RL Submitted (10-JUL-1996) to the INSDC. RL Toshihiro Omura, National Agricultural Research Center, Laboratory of RL Virology; Kannondai 3-1-1, Tsukuba, Ibaraki 305-8666, Japan RL (E-mail:toomura@affrc.go.jp, Tel:81-29-838-8932, Fax:81-29-838-8929) XX RN [2] RA Maruyama W., Ichimi K., Fukui Y., Yan J., Zhu Y., Kamiunten H., Omura T.; RT "The minor outer capsid protein P2 of rice gall dwarf virus has a primary RT structure conserved with, yet is chemically dissimilar to, rice dwarf virus RT P2, a protein associated with virus infectivity"; RL Arch. Virol. 142:1-9(1997). XX DR MD5; 34d7df31fc197767e900fd7171c840e2. XX FH Key Location/Qualifiers FH FT source 1..3514 FT /organism="Rice gall dwarf virus" FT /segment="S2" FT /mol_type="genomic RNA" FT /db_xref="taxon:10986" FT CDS 14..3460 FT /codon_start=1 FT /transl_table=1 FT /product="RGDV P2" FT /function="vector transmissibility" FT /note="located in the outer capsid" FT /db_xref="GOA:O56834" FT /db_xref="InterPro:IPR008580" FT /db_xref="UniProtKB/Swiss-Prot:O56834" FT /protein_id="BAA24136.1" FT /translation="MSYPGNVHSLRDLYNVFKDAPNRERLILDMNSQLARIDNIAQILT FT MTEEQEKEVIAKMSASLANLGLNMDNAIRELKNMETVHMDRVSVLTVYQSAVLNITNNT FT HTISDSMKSIMYDLSGYVNTTIYPTIQSPATEDRSSLIPLNYKNMKNIFDDKHTIVFAT FT VIGPQCVDFTTEDVTNISWIVDSHEIIKITYYPSSLIMETSIVGNRYLQYQLSLSNQTI FT DEYDNNGPYSCLLVFCVVGANGLLDIYSMSSQQVRKYVNDYEVGESSLIGYSTKHGSLH FT LSSNDIRNISHELSGSPYIDVRVTYSITAAFPDSQLLSMLLDNIQQSLGTLTACESKSF FT DDAYRAAMDNQFTKADVLTSSIITMRSSLNSLISSSPLLSDDTIRIVDDCTFQLASALT FT LTNEFASDSANLLGTFKVKQTTIDRYSNTKISEGKAVYLSPTLATMNVHSGSVVVSTDS FT FHNNNALKVMLLAPGLVKPDNVNFDLLSVKSNNVIDLVSDYKLDDAIIQFTDQPDYSST FT TSIANAKSVVYMKTTGCIGLTYSNPNELILNMSLQLNSAAPSLGGVVNNNTTFSLTIGS FT TIINYVTDFEITDFTDSSGKQSLKLTSSVNLLTKLSVDMIFYAVSINAGGVIATDTHKY FT TDTGFDSSNYTYGWEMYDSAALNDYQDMTVVTPPKFTAKMLRPQDASKLNGDCVGGTYK FT KGRNILVIAGNRIFYNGVSVYFKMQKNSMISLKYFINPSGLSTVDTCDVRITRNAAFLT FT QIDTKLMSVQSVLNDVQRRIDIINQLMQPSRIQTLATIIQGIGGVVSLAMPLLGAIVVT FT IGAIVSIADPNHHGVDYQAVLNAFHSWCQYAVVARMNYGLLKADDPKLDILKRISDGSV FT NTFRNKPKKITLPGIDDEVIRGTSTDYIDTGINVRYNSMGLFGEGKLEEWMANTALKVQ FT DGTANIFQKNLFSLLQKRKIVPMHARVEIIQTEKIGDVYRNTILYAGINEGSYIENSVY FT LTRSGNTRIKRLNMTSGPGMFKAVTESTTEVGNFKAVDWTLSGMTKEEIYNAAGLMYPN FT KNPAHSEVQDVYESVIRDMAEIDDTWVLQHHKTVMLPGQIEAFEHLIRVSANKFQYAFI FT GSNCQNFADDVVGILSQFKRPKRWVDENDFKQYIQSIYDEL" XX SQ Sequence 3514 BP; 1137 A; 627 C; 738 G; 1012 T; 0 other; ggcatttttt gcaatgtcgt accctggaaa cgttcactca ttgagggacc tgtataatgt 60 gttcaaagat gcgccgaacc gcgaaaggct catcctggat atgaattctc aattggcgag 120 aattgacaat atagcgcaga ttttaactat gactgaagag caggaaaagg aagtgatagc 180 taaaatgtca gcatcactag ccaacctagg attaaacatg gataatgcta tccgtgaact 240 gaaaaacatg gaaacggtac acatggatag agtgtctgtc ctgaccgtct atcaatcggc 300 ggtgttaaac atcacaaata atacgcatac gatatctgat agtatgaaat ctatcatgta 360 tgacctgtcg ggatatgtaa acactaccat atatcctacg atccagtctc ctgcaactga 420 ggaccgatcc tcgttaatac ctttaaacta taagaatatg aaaaacatct ttgatgataa 480 gcatacaata gtgtttgcca ctgtaattgg gcctcaatgt gttgacttca ctaccgaaga 540 tgtaacaaac atttcatgga ttgttgattc gcatgagata atcaaaataa cgtattaccc 600 atcctcattg attatggaaa ctagcattgt cggaaacaga tacctgcagt atcagcttag 660 tttgtcaaat caaactatcg atgaatatga taacaatggc ccttattcat gcctactcgt 720 attctgcgtg gtaggtgcga atggtttact agatatttat tcgatgtctt cacagcaagt 780 gaggaagtat gtaaatgatt acgaagttgg agaatcatca ctgattggat attcgacaaa 840 gcatggcagt ctacatctca gttctaatga tattagaaat atatcgcatg agttgagtgg 900 gtcgccatat atagacgtac gtgttacata ctcaattaca gctgcgtttc cggactcaca 960 attgctgtca atgttattgg ataatattca gcagtctttg ggtacgttaa cggcatgcga 1020 atctaagagt ttcgatgatg catatcgtgc agctatggac aatcaattca caaaggctga 1080 tgtactcaca tctagtatta taactatgcg gagttcatta aatagtttga tatcatcatc 1140 gcctctcctt agtgatgaca ctatcaggat agtcgatgat tgcacgtttc aattggcatc 1200 tgcacttacg ctaactaatg aatttgcatc tgattctgca aatctgctgg gaactttcaa 1260 agtgaaacaa acaactattg ataggtattc aaacactaag atctcagagg gaaaggctgt 1320 atatctttct ccgaccttgg cgacaatgaa cgttcatagt ggatccgtgg tggtgtcaac 1380 tgactcattt cataataata atgcattaaa ggtcatgcta ctagcacccg gattagttaa 1440 gccggataat gttaatttcg atctattatc agttaagagt aataacgtta ttgatttagt 1500 atctgattat aaattagatg atgctatcat acaatttaca gaccaaccag attactcatc 1560 cacgacttct atagctaatg cgaagtcagt cgtatatatg aagacgactg gatgtatagg 1620 attaacctat tctaatccga atgaattaat tcttaacatg tccttacaac taaattcggc 1680 ggctccctcg ctaggcggag tggttaataa taacactact ttttcgctaa cgattggaag 1740 taccataata aattatgtga cggattttga aatcactgat ttcactgatt catctggtaa 1800 gcaatcctta aaattaactt caagtgttaa cctactgacc aaattatcag ttgatatgat 1860 cttttatgcg gtatcaataa atgccggagg cgtgatagct acggatacgc ataagtatac 1920 agacactgga tttgattctt ccaattatac ttatggttgg gagatgtacg actcagcagc 1980 tttaaatgac tatcaggaca tgaccgtggt aactccgccg aaatttacgg cgaagatgtt 2040 gagaccgcag gacgcatcca aacttaatgg tgattgcgtg ggcggcactt ataagaaggg 2100 taggaatata cttgtaatcg ctggcaaccg catcttttat aacggagtgt cggtgtattt 2160 taaaatgcag aaaaattcaa tgatatcgtt aaaatacttt ataaatccat ccggtctatc 2220 aaccgtggat acatgtgatg ttagaataac gcgtaatgcc gcattcttaa cgcagataga 2280 taccaagtta atgtcggttc agagcgtctt aaacgacgta caacggagga ttgacataat 2340 taatcagtta atgcaacctt ccagaataca aacgctagct actatcatac aaggaatcgg 2400 cggagtagtt tcgttggcta tgccgttact tggtgctata gtcgtaacca ttggagccat 2460 tgtatcgata gctgatccaa atcatcatgg tgttgattat caggcggtgt taaatgcatt 2520 tcactcatgg tgtcaatacg cagtggtggc aaggatgaat tatggcttgc taaaagcaga 2580 tgatccaaag cttgatatac ttaagcggat atcagatgga tcagttaata cgtttaggaa 2640 caagccgaag aaaatcacgt tgccaggtat cgatgatgag gtaatcagag gaacttccac 2700 cgattacatt gatacaggta tcaatgtgag atataattca atgggattat tcggtgaggg 2760 taaattagag gaatggatgg ctaatactgc tcttaaagtg caagacggta cggctaacat 2820 cttccaaaag aatttatttt cattattgca aaagaggaaa atcgtaccaa tgcatgcacg 2880 cgtagagata attcaaactg aaaagattgg agatgtatat cggaacacaa tcttgtacgc 2940 tggaataaat gaaggttcat atattgagaa tagtgtttat ttgactagat caggtaacac 3000 taggattaaa agattaaata tgacatcagg accaggtatg tttaaagcag taactgagtc 3060 aactactgaa gtgggcaatt ttaaagcggt agattggaca ctatcaggaa tgactaagga 3120 agaaatatac aatgcagctg gactcatgta tccaaataaa aatccagctc attctgaagt 3180 acaagatgtg tatgaatctg tcatacgaga tatggctgaa attgatgaca cttgggtgtt 3240 gcaacaccat aaaacggtca tgttaccagg tcaaatcgaa gcatttgaac atctgattcg 3300 agtaagtgca aataaatttc agtatgcatt catcggttcc aactgtcaga acttcgcgga 3360 tgacgtggtt ggaatactgt ctcagtttaa gagacctaaa cgatgggtag acgagaatga 3420 ttttaaacaa tatatacagt ccatttatga cgaactctag ggtgacgaag gagcaaagca 3480 ccgctcacat acgtggagag tggtggaact tgat 3514 //