ID D86330; SV 1; linear; genomic RNA; STD; VRL; 3048 BP. XX AC D86330; XX DT 11-JUL-1996 (Rel. 48, Created) DT 20-MAY-2008 (Rel. 95, Last updated, Version 7) XX DE Cucumber mosaic virus gene for 2a protein, complete cds. XX KW . XX OS Cucumber mosaic virus (cucumber mosaic cucumovirus) OC Viruses; Riboviria; Bromoviridae; Cucumovirus. XX RN [1] RP 1-3048 RA Zhang G.-H.; RT ; RL Submitted (01-JUL-1996) to the INSDC. RL Contact:Guo-Hua Zhang Institute of Microbiology, Chinese Academy of RL Science, Virology; ZhongguanCun, Beijing 100080, China XX RN [2] RP 1-3048 RA Zhang G.-H., Xu Y., Cai W., Fang R.; RT "Complete Genomic RNA2 Sequence of Cucumber Mosaic Virus Strain SD"; RL Ping Tu Hsueh Tsa Chih 0:0(1996). XX DR MD5; 7b210d177531bfd786bfa2cbe15d9851. DR EuropePMC; PMC110906; 11044076. DR EuropePMC; PMC136033; 11884564. DR EuropePMC; PMC1900123; 17344304. DR EuropePMC; PMC5339842; 28059067. DR RFAM; RF01084; TLS-PK3. XX FH Key Location/Qualifiers FH FT source 1..3048 FT /organism="Cucumber mosaic virus" FT /segment="2" FT /strain="SD" FT /mol_type="genomic RNA" FT /note="collection site=Shandong Prevince, China" FT /db_xref="taxon:12305" FT CDS 79..2655 FT /codon_start=1 FT /transl_table=1 FT /product="2a protein" FT /note="CMV-SD 2a" FT /db_xref="GOA:Q66144" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:Q66144" FT /protein_id="BAA13070.1" FT /translation="MAFPAPAFSLANLLNGSYGVDTPEEVERVRSEQREEAAAACRNYR FT PLPAVDASESVPEDVHSLRTPDGAPSEEVSVEFVTYGAEDYLEKSDDELLVAFETMVKP FT MRIGQLWCPAFNKCSFISSIAMARALLLAPRTSHRTMKCFEDLVAAIYTKSDFYNDDEC FT ETDDVQIDISSRDVPGYSFEPWSRTSGFEPPPICEACDMIMDQCPCFDFNALKKSCAER FT TFADDYVIEGLDGVVDNATLLSNLGPILVPVKCQYEKCPTPTVANPPSLNRATDRVDIN FT LVQSICDSTLPTHSNYDDSFHQVFVESADYSIDLDHVRLRQSDLIAKIPDSGHMIPVLN FT TGSGHKRVGTTKEVLTAIKKRNADVPELGDSVNLSRLSKAVAERFFISYINGDSLASSN FT FVNVVSNFHDYMEKWKSSGLSYDDLPDLHAEKLQFYDHMIKSDVKPVVSDTLNIDRPVP FT ATITYHKKGITSQFSPLFTAPFERFQRCLRERIILPVGKISSLEMAGFDVKNKHCLEIN FT LSKFDKSQGEFHLMIQEHILNGLGCPAPITKWWCDFHRFSYIRDRRAGVGMPISFQRRT FT GDAFTYFGNTIVTMAEFPWCYDTDQFEKLLFSGDDSLGFSVLPPVGDPSKFTTLFNMEA FT KVMEPAVPYICSKFLLSDEFGNTFSVPDPLREVQRLGTKKIPYSDNDEFLFAHFMSFVD FT RLKFLDRMTQSCIDQLSLFFELKYRKSGAEAALMLGAFKKYTANFQSYKELYYSDRRQC FT ELINSFSCVELRIERSSSTKQRKKKDGIERRRNDKRRTPTGSYSGGEEAETKVSQAEST FT GTRSQKSQREGAFKSQAVPLPTILSSRWFGTDRDVPPCEHGGIVRV" XX SQ Sequence 3048 BP; 761 A; 693 C; 719 G; 875 T; 0 other; gtttatttac aagagcgtac ggttcaatcc ctgcctcccc tgtaaaactc cctagacttt 60 ctagtttctt tctttcctat ggctttcccc gcccccgctt tctcactagc caatcttttg 120 aacggtagtt acggtgtcga cactcccgag gaagtggaac gcgtgcgatc tgagcaacgc 180 gaagaggctg ctgcggcctg tcgtaattac aggcccttac ccgctgtgga tgccagcgag 240 agtgtcccag aggatgtgca ttccctccga actccagacg gagctccctc cgaagaggtg 300 tctgtagagt ttgtcactta tggtgctgaa gattaccttg aaaaatctga tgatgagctc 360 cttgtcgctt ttgagacgat ggtcaaaccc atgcgtatcg gacaactgtg gtgccctgcg 420 tttaataaat gttcttttat ttccagcatt gccatggcca gggctttgct attagcaccc 480 agaacatccc accgaaccat gaagtgtttt gaggacctgg tcgcggctat ttacactaaa 540 tccgatttct acaacgatga tgagtgtgaa accgacgacg ttcagataga tatctcgtct 600 cgcgatgtac ccggttattc tttcgaaccg tggtcccgaa cgtctggatt tgaaccacca 660 cctatctgtg aggcgtgtga catgatcatg gaccagtgcc cgtgttttga tttcaatgct 720 ttaaagaaat cgtgcgctga gaggacattc gctgatgatt atgttatcga aggtttagat 780 ggtgttgtag acaatgcgac tctgttgtcg aatttaggcc caattttggt gcccgtgaaa 840 tgtcagtatg agaaatgtcc aacacccacc gttgcgaatc ctccgagtct taatcgtgct 900 actgatcgtg ttgatatcaa tttagttcaa tccatttgtg actcgactct gcccactcat 960 agtaactacg acgactcttt tcatcaagtg ttcgtcgaga gtgctgacta ttctattgat 1020 ctggatcatg ttagacttcg ccagtctgat cttattgcaa aaatcccaga ttcagggcat 1080 atgataccgg ttttgaacac cgggagcggt cacaagagag taggtacgac gaaggaggtc 1140 cttacagcta tcaagaaacg taatgctgac gttccagagc taggtgattc cgttaatctg 1200 tccagattga gtaaggctgt ggctgagaga tttttcattt catacattaa tggtgactct 1260 ctagcatcca gcaactttgt taatgtcgtt agcaacttcc acgattacat ggaaaaatgg 1320 aagtcctcag gtctttcgta tgatgatctt ccggatcttc atgctgaaaa gttgcagttt 1380 tatgatcaca tgataaaatc tgatgtgaaa cctgtagtga gcgacacact caacattgac 1440 agaccggttc cggctactat aacgtatcat aagaaaggta taacctccca gttctcaccg 1500 ttgtttactg cgccatttga gcgtttccag agatgccttc gagaacgcat tattcttcct 1560 gttggaaaga tttcatccct tgagatggca ggatttgatg ttaagaacaa gcactgtctc 1620 gagattaatt tgtccaaatt cgacaagtct caaggtgaat tccatctaat gattcaggaa 1680 cacattttga atggtctagg gtgcccagct ccgataacta agtggtggtg tgatttccac 1740 agattctctt atattagaga ccgtagagct ggcgttggta tgcccatcag ttttcagaga 1800 cgaactggtg atgcattcac ctactttggt aacaccatcg tcaccatggc tgaatttcca 1860 tggtgttacg acaccgacca attcgaaaag cttttattct caggcgatga ttctctagga 1920 ttttcagtac ttcctcctgt tggtgatccg agtaagttca cgactctctt caacatggaa 1980 gctaaggtga tggagcccgc agtaccatat atttgttcga agttcttact ctctgacgag 2040 ttcggtaaca ctttttccgt tccagaccca ttgcgcgagg ttcagcggtt aggcacgaag 2100 aaaatcccct attcagacaa cgatgaattc ctgtttgctc acttcatgag ctttgttgat 2160 cgattgaagt ttttggaccg aatgactcag tcttgtatcg atcagctttc tctcttcttt 2220 gagttgaaat acaggaagtc tggggctgag gctgctttaa tgttaggcgc ctttaagaaa 2280 tataccgcta attttcagtc ctataaagaa ctctactatt cagatcgtcg tcagtgcgaa 2340 ttgatcaatt cgtttagttg tgtagagtta aggattgagc gttcgagttc cactaagcaa 2400 cgaaagaaga aagatggaat tgaacgaagg cgcaatgaca aacgtcgaac tccaactggc 2460 tcgtatagtg gaggcgaaga ggcagagacg aaggtctcac aagcagaatc gacgggaacg 2520 aggtcacaaa agtcccagcg agagggcgcg ttcaaatctc aggctgttcc gcttcctacc 2580 attctatcaa gtagatggtt cggaactgat agagatgtac caccatgtga acatggtggg 2640 attgtccgag tctgaggccc cttgttttac gttgccagcg gaagaagacc atgatttcga 2700 cgatacggat tggttcgctg gtaacgagtg ggcggaaggt cgtttctgaa acctcccctt 2760 cctaatctcc ctccggtttt ctgaggcggg agctgagttg gcagtactgc tacaaactgt 2820 ctgaagtcac taaacgtttt aaacggtgaa cgggttgtcc atccagctaa cggctaaaat 2880 ggtcagtcgt ggagaaatcc acgccgaagg cttacaagtc ttcgagacac ctttgaaacc 2940 atctcctagg tttcttcgga aggacttcgg tccgtgtact tctagcacaa cgtgctagtt 3000 ttagggtacg ggtgtccctc gctttgcggg gtcctctata ggagacca 3048 //