ID   D83958; SV 1; linear; genomic RNA; STD; VRL; 2215 BP.
XX
AC   D83958;
XX
DT   23-MAR-1996 (Rel. 47, Created)
DT   07-JUL-2003 (Rel. 76, Last updated, Version 10)
XX
DE   Cucumber mosaic virus RNA3, complete sequence (encoding 3a protein and coat
DE   protein).
XX
KW   .
XX
OS   Cucumber mosaic virus (cucumber mosaic cucumovirus)
OC   Viruses; Riboviria; Bromoviridae; Cucumovirus.
XX
RN   [1]
RP   1-2215
RA   Nagano H., Furusawa I.;
RT   ;
RL   Submitted (07-MAR-1996) to the INSDC.
RL   Hideaki Nagano, Laboratory of Plant Pathology, Faculty of Agriculural
RL   Biology, Kyoto University; Sakyouku, Kitasirakawaoiwakecho, Kyoto, Kyoto
RL   606-01, Japan (E-mail:nagano@kais.kyoto-u.ac.jp, Tel:81-75-753-6132,
RL   Fax:81-75-753-6146)
XX
RN   [2]
RX   PUBMED; 9032362.
RA   Nagano H., Okuno T., Mise K., Furusawa I.;
RT   "Deletion of the C-terminal 33 amino acids of cucumber mosaic virus
RT   movement protein enables a chimeric brome mosaic virus to move from cell to
RT   cell";
RL   J. Virol. 71(3):2270-2276(1997).
XX
DR   MD5; 0c6c244f0f6d81be1c91f1cf59a1eee7.
DR   EuropePMC; PMC110906; 11044076.
DR   EuropePMC; PMC3550734; 23637513.
DR   RFAM; RF01084; TLS-PK3.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2215
FT                   /organism="Cucumber mosaic virus"
FT                   /segment="3"
FT                   /strain="Y"
FT                   /mol_type="genomic RNA"
FT                   /clone="Yk"
FT                   /db_xref="taxon:12305"
FT   CDS             122..961
FT                   /codon_start=1
FT                   /product="3a protein"
FT                   /db_xref="GOA:P18028"
FT                   /db_xref="InterPro:IPR000603"
FT                   /db_xref="UniProtKB/Swiss-Prot:P18028"
FT                   /protein_id="BAA12151.1"
FT                   /translation="MAFQGTSRTLTQQSSAATSDDLQKILFSPEAIKKMATECDLGRHH
FT                   WMRADNAISVRPLVPEVTHGRIASFFKSGYDAGELCSKGYMSVPQVLCAVTRTVSTDAE
FT                   GSLRIYLADLGDKELSPIDGQCVSLHNHDLPALVSFQPTYDCPMETVGNRKRCFAVVIE
FT                   RHGYIGYTGTTASVCSNWQARFSSKNNNYTHIAAGKTLVLPFNRLAEQTKPSAVARLLK
FT                   SQLNNIESSQYLLTNAKINQNARSESEELNVESPPAAIGSSSASRSEAFRPQVVNGL"
FT   CDS             1259..1915
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:P18027"
FT                   /db_xref="InterPro:IPR000247"
FT                   /db_xref="InterPro:IPR023800"
FT                   /db_xref="InterPro:IPR037137"
FT                   /db_xref="UniProtKB/Swiss-Prot:P18027"
FT                   /protein_id="BAA12152.1"
FT                   /translation="MDKSESTSAGRNRRRRLRRGSRSASSSSDANFRVLSQQLSRLNKT
FT                   LAAGRPTINHPTFVGSERCKPGYTFTSITLRPPKIDRESYYGKRLLLPDSVMEYDKKLV
FT                   SRIQIRVNPLPKFDSTVWVTVRKVSASSDLSVAAISAMFADGASPVLVYQYAASGVQAN
FT                   NKLLYDLSAMRADIGDMRKYAVLVYSKDDTLETDELVLHVDVEHQRIPTSGVLPV"
XX
SQ   Sequence 2215 BP; 524 A; 516 C; 522 G; 653 T; 0 other;
     gtaatcttac cacctgtgtg tgtgtgtgtg tgtatcgagt cgtgttgtcc gcacatttga        60
     gtcgtgttgt ccgcacatat atatatttat atattttaca gtgtgttaga tttcccgagg       120
     catggctttc caaggtacca gtaggacttt aactcaacag tcctcagcgg ctacgtctga       180
     cgatcttcaa aagatattat ttagccctga agccattaag aaaatggcta ctgagtgtga       240
     cctaggccgg catcattgga tgcgcgctga taatgctatt tcagtccggc ccctcgttcc       300
     cgaagtaacc cacggtcgta ttgcttcctt ctttaaatct ggatatgatg ctggtgaatt       360
     gtgctcaaaa ggatacatga gcgtccctca agtgttatgt gctgttactc gaacagtttc       420
     cactgatgct gaagggtcct tgagaattta cttagctgat ctaggtgaca aggagttatc       480
     tcccatagat gggcagtgcg tttcgttaca taaccatgat cttcccgctt tggtgtcttt       540
     ccagccgacg tatgattgtc ctatggaaac agttgggaat cgtaagcggt gttttgctgt       600
     tgttatcgaa agacatggtt acattgggta taccggtacc acagctagcg tgtgtagtaa       660
     ttggcaagca aggttttcat ctaagaataa caactacact catatcgcag ctgggaagac       720
     tctagtactg cctttcaaca gattagctga gcaaacaaaa ccgtcagctg tcgctcgcct       780
     gttgaagtcg caactgaaca acattgaatc ttcgcaatat ttgttaacga acgcgaagat       840
     taatcagaat gcgcgcagtg agtccgagga attaaatgtt gagagccctc ccgccgcaat       900
     cgggagttct tccgcgtccc gctccgaagc cttcagaccg caggtggtta acggtcttta       960
     gcactttggt gcgtattagt atataagtat ttgtgagtct ttacataata ctatatctat      1020
     agtgtcctgt gtgagttgat acagtagaca tctgtgacgc gatgccgtgt tgagaaggga      1080
     acacatctgg ttttagtaag cctacatcat agttttgagg ttcaattcct cttactccct      1140
     gttgagcccc cttactttct catggatgct tctccgcgag attgcgttat tgtctactga      1200
     ctatatagag agtgtgtgtg ctgtgttttc tcttttgtgc gtagaattga gtcgagtcat      1260
     ggacaaatct gaatcaacca gtgctggtcg taaccgtcga cgtcgtttgc gtcgtggttc      1320
     ccgctccgcc tcctcctcct cggatgctaa ctttagagtc ttgtcgcagc agctttcgcg      1380
     acttaacaag acgttagcag ctggtcgtcc aactattaac cacccaacct ttgtagggag      1440
     tgaacgctgt aaacctgggt acacgttcac atctattacc ctaaggccac caaaaataga      1500
     ccgtgagtct tattatggta aaaggttgtt attacctgat tcagtcatgg aatatgataa      1560
     gaagcttgtt tcgcgcattc aaattcgagt taatcctttg ccgaaatttg attctaccgt      1620
     gtgggtgaca gtccgtaaag tttctgcctc ctcggactta tccgttgccg ccatctctgc      1680
     tatgttcgcg gacggagcct caccggtact ggtttatcag tatgctgcat ctggagtcca      1740
     agctaacaac aaattgttgt atgatctttc ggcgatgcgc gctgatatag gcgacatgag      1800
     aaagtacgcc gtcctcgtgt attcaaaaga cgatacgctc gagacggacg agttagtact      1860
     tcatgttgac gtcgagcacc aacgcattcc cacatctgga gtgctcccag tctgattcca      1920
     tgttcccaga atcctccctc cgatctctgt ggtgggagct gagttggcag ttctgctata      1980
     aactgtctga agtcactaaa cgttttacgg tgaacgggtt gtccatccag cttacggcta      2040
     aaatggtcag tcgtggagaa atctacgcca gcagatttac aaatctctga ggcgcctttg      2100
     aaaccatctc ctaggtttct tcggaaggac ttcggtccgt gtaccctcag cacaacgtgc      2160
     tagtttcagg gtacgggtgc cccccacctt cgtgggggcc tccaaaagga gacca           2215
//