ID D49695; SV 1; linear; genomic RNA; STD; VRL; 3753 BP. XX AC D49695; XX DT 24-MAR-1995 (Rel. 43, Created) DT 22-SEP-2006 (Rel. 89, Last updated, Version 9) XX DE Nilaparvata lugens reovirus genome segment S3, complete sequence. XX KW . XX OS Nilaparvata lugens reovirus OC Viruses; Riboviria; Reoviridae; Spinareovirinae; Fijivirus. XX RN [1] RP 1-3753 RA Nakashima N.; RT ; RL Submitted (14-MAR-1995) to the INSDC. RL Nobuhiko Nakashima, National Institute of Sericultural and Entomological RL Science; 1-2 Owashi, Tsukuba, Ibaraki 305, JAPAN (Tel:81-298-38-6109, RL Fax:81-298-38-6028) XX RN [2] RP 1-3753 RA Nakashima N., Noda H.; RT "Nucleotide and deduced amino acid sequences of Nilaparvata lugens RT reovirus; a putative member of the genus Fijivirus"; RL Unpublished. XX RN [3] RP 1-35 RX PUBMED; 8558122. RA Nakashima N., Koizumi M., Watanabe H., Hiroaki N.; RT "Complete nucleotide sequence of the Nilaparvata lugens reovirus: a RT putative member of the genus Fijivirus"; RL J. Gen. Virol. 77:139-146(1996). XX DR MD5; e27bb03e71aadb1cc5133b870f616143. XX FH Key Location/Qualifiers FH FT source 1..3753 FT /organism="Nilaparvata lugens reovirus" FT /segment="S3" FT /strain="Izumo" FT /mol_type="genomic RNA" FT /db_xref="taxon:33724" FT CDS 15..3686 FT /codon_start=1 FT /product="138.5KD protein" FT /note="major core capsid" FT /db_xref="UniProtKB/TrEMBL:Q83860" FT /protein_id="BAA08544.1" FT /translation="MHKQSSSQNIEKTANLNDHDTTKNDDDKIEERNNELVKEGVSSKI FT DLMTPDKDAKDSNENTKAVESRNDVDTIKNTIPNDIIKAQDSLYFIADTVKAAQIENEE FT LAKAAANQALLALVKNPSTSRSIVTYNGFPSVNTTNSLSSYYVFIDGSADNFSFPSLFT FT VSSTFNSEYEIAQNVRISPVLAATMEDAPIIKNSMEAFKQGIVKSVPIWNNTYSASILD FT PYEFSDNMLAANLVYVGMSNNTYLQSVWLYRMFQCLISGLASENLIFKNIKYGILTPIE FT TNNAMSQSLTEHKIVRNGIPHPTFAGAYSLYTPMVLQMENDLYNNGIMGSAPSFKVSVE FT TVIARLKMDSIAHIVTDQFSSALTMNSFDRLKNRCLTSATHRNLVASCYPDTYTFDFMP FT DSIYNVTLSYMPTPKETYDSILYILMNNDVKNRFIKVFKDTLRQMNVLTVGNKSLHIMS FT GITAISSRPDMSATFLSDVTNALTSSNSEIFLDFLAAEFYGSAFVDVRFTSAMANNLFL FT NSLTITEILVLFIPFPKIAWSSQVTLGSALYRLLQQYAGQELNKWIGMYGLFTHLDEAG FT NFVRRDLNEADYNNHLLVDERIYYSFLVPCANATGRNQCKIIGDIYDLITPRGARIELI FT NKANANLPYFNRSYDFYVSWRPMKQYQCNVDSPIAQSIQAIINFQKRVMNHAIKIKEIT FT SQKTTLSWISELLAILSVQGAVIGQDYHVCLGRMFSILANTGLSLIDTFDENRPYLQTR FT SIGFGSYRPYEPGATTNQCISTPMSEMISDTKISYYLLCKQSTVITDDVYVVGAGPEYN FT QAIYPTIPIFDGKTIYEFIYSVICESRKFVEMLYVFSQVNLAGQDPHFQQIRDAIAGTN FT TAGTSRKLLAMISDIYKYPLVEMCNILLNGSRVVVADPRLFMVTPYFIDYQRNKVRDQF FT ADKFRTGELMIHVDEWFNKKLDIFSQLFLSTESPVYSMSTGIAFGYFSVTDYNPTRTLD FT DVCDLERYTLGQEVFLVNTQPLKEVGHAFKYRMTILPGVDTDFSLPSQINIKHILVIPD FT IKLLTMENAVNFIKEAVELDKIVVEFPNLNYRYQIKNQFSRVNPPYSPSMFENTIADQS FT SGKHFFEFFDTTSSREFHVMKQTTDYLLLRYINCEILHEQILIRDIYGPNSATTRLDYN FT FDLDSFGFGLDEGTVYPVTNIPKITGRTVNFNNAIKFVSDNYSTDTPDHNVKPDVIF" XX SQ Sequence 3753 BP; 1215 A; 612 C; 672 G; 1254 T; 0 other; agtttgttgt gatcatgcat aaacaaagct caagccagaa catagaaaaa accgcaaatc 60 tgaacgacca tgacacaact aaaaatgacg atgataaaat agaagaacgt aataatgaat 120 tggtgaaaga gggtgtttca tctaaaattg atctaatgac tccagataaa gatgcgaaag 180 atagtaacga aaacactaaa gccgttgaat caaggaacga tgttgatacc atcaaaaaca 240 caatacctaa tgacataatt aaagctcaag attcattata ttttatcgca gacactgtta 300 aggcagctca gattgagaat gaagagctcg ctaaagccgc agcaaatcaa gcactactag 360 ctctagttaa aaacccaagt acctcacgat cgatagtaac ttataacgga tttccttcag 420 tcaatacgac gaattcttta agttcatatt atgtatttat tgatggttca gctgataatt 480 tttcatttcc aagtttgttt actgtaagta gtacttttaa ttctgaatat gaaatagcac 540 aaaatgtcag gattagtcca gtattagccg ctacaatgga agatgctcca atcattaaaa 600 atagtatgga agcatttaaa caagggattg taaaaagtgt ccccatttgg aataacacct 660 atagtgcatc catccttgat ccttatgagt tttctgataa tatgctagct gccaatctag 720 tgtacgttgg aatgtctaat aatacttatc ttcaaagtgt ttggctttat cggatgtttc 780 aatgtttaat atcaggactc gctagcgaga atcttatttt taagaatatt aagtatggaa 840 tacttacccc tattgagacc aacaacgcaa tgagtcaatc attgactgaa cataaaatag 900 tacgtaatgg tataccgcat cctacatttg ctggtgcgta tagtctttat actccaatgg 960 ttctacaaat ggaaaatgat ttatataaca atggaatcat gggatctgcc ccgagtttta 1020 aagtcagtgt tgaaacggtg atcgcaagat taaaaatgga ttcaattgct catattgtta 1080 ctgatcaatt ttcgtcggct ttaacaatga attcatttga tcgtttgaaa aatcgatgct 1140 taacaagtgc tacccataga aatttagtag cgtcatgtta ccctgatact tatacatttg 1200 attttatgcc tgattcgata tataacgtaa ctttatctta tatgcctact cccaaagaaa 1260 cctatgattc aattctttat atattaatga ataatgacgt gaaaaataga tttattaaag 1320 ttttcaaaga cacccttcgt caaatgaatg tacttacggt cggtaataaa tctctacata 1380 taatgagcgg tattacagca atcagttctc gtcctgatat gtcagcaact tttcttagtg 1440 atgttaccaa cgcactaaca tcatcaaatt cggaaatatt tttagatttt ctagcagcag 1500 aattttatgg cagtgctttt gttgatgttc gctttacatc agctatggct aacaatttat 1560 ttctcaattc attaacaata acagaaatac tggttctatt tatacctttt cccaaaattg 1620 cttggagttc gcaagttacg ttaggttccg cgctatatcg tttgttacaa caatatgcag 1680 gacaggaatt aaataaatgg attggtatgt atgggttgtt tactcatcta gatgaagctg 1740 gtaattttgt aagacgtgat ttaaacgaag ctgattataa taaccacctt ttggtagatg 1800 aacgtattta ttattctttt ttagttccgt gtgctaatgc aactggaaga aatcagtgca 1860 aaattatagg tgatatatat gatttgatta ctcctcgagg ggctaggata gagttaatta 1920 ataaagccaa tgcgaacctc ccttatttta atagatctta tgatttttat gtttcttgga 1980 ggcctatgaa acagtatcaa tgtaacgttg attctcctat cgctcaaagt attcaagcaa 2040 ttataaattt tcagaaacgt gttatgaacc atgctattaa aattaaagaa ataacatctc 2100 agaaaactac cctttcatgg attagtgaat tgttggccat ccttagcgtg caaggagcgg 2160 ttatcggtca ggattaccat gtgtgtttag gacgtatgtt ttcaatatta gccaataccg 2220 gattgagttt gattgataca tttgatgaaa acagaccata tttacaaacg agatcaatag 2280 gttttggttc ttatagacct tatgaacctg gagcaacaac taatcaatgt atatcaactc 2340 ctatgtcaga aatgatctca gatacaaaaa tttcctatta cttattatgt aaacagagta 2400 cagttattac agatgacgtt tatgtggttg gtgccggacc tgagtataat caggctatat 2460 atcctactat tccaatattt gatggcaaaa caatatacga gtttatttat tccgttatat 2520 gtgagagtag aaagttcgtt gagatgttgt atgtattttc tcaagttaat ttggccggac 2580 aggatccaca cttccaacag atacgtgatg ctattgcggg aacgaatact gctggtacga 2640 gtcgaaaatt gctagctatg atatctgata tttataaata tcctttggtc gaaatgtgta 2700 atattctttt aaatggtagt cgcgttgttg tagcagatcc acgccttttc atggtaacac 2760 cgtattttat cgactatcaa cgtaataagg ttagagacca gtttgcagat aaattccgaa 2820 cgggtgagtt aatgattcat gttgacgaat ggttcaataa gaaattagac atattttctc 2880 agctattttt atctactgaa tctcctgtgt acagtatgtc tactggtatt gctttcggat 2940 acttttctgt gaccgattat aatcctacaa gaacattaga tgacgtctgt gatcttgaga 3000 gatatacatt aggtcaagaa gtctttttag ttaatacgca gccgttgaaa gaagtgggac 3060 atgcttttaa atacagaatg acgatcttgc ccggtgttga tactgatttt tcacttccta 3120 gtcagataaa tattaagcac atacttgtta ttcctgatat taaattattg actatggaga 3180 atgccgtaaa ttttattaag gaggctgttg agttggataa gatagtggtt gagtttccta 3240 atttgaatta tcgatatcaa attaaaaatc aattttcgag agttaatcca ccatactcac 3300 catcaatgtt tgagaatact attgcggatc aatctagtgg aaagcatttc tttgaatttt 3360 ttgatacaac aagttcaaga gaattccatg ttatgaaaca gactactgat tatcttctgc 3420 tgcggtatat taattgcgaa atacttcatg aacaaattct tattagagat atctatggac 3480 ccaattctgc gactacacgt ttagattata attttgattt agattcattt ggattcggat 3540 tagatgaagg tacagtgtat cctgtaacga acatacctaa aatcactgga cgtactgtta 3600 atttcaataa cgcaattaag tttgtatctg ataattatag taccgatact cctgaccata 3660 atgttaaacc agatgtcatc ttctgagttg tggttttcgg cgtcatatgg tttgaacttt 3720 aagtgtattt ggacagatca cacacttgtt gtc 3753 //