ID D42079; SV 1; linear; genomic RNA; STD; VRL; 2238 BP. XX AC D42079; XX DT 19-NOV-1994 (Rel. 41, Created) DT 07-JUL-2003 (Rel. 76, Last updated, Version 3) XX DE Cucumber mosaic virus (strain C7-2) RNA3 encoding movement protein 3a and DE viral coat protein, complete cds. XX KW coat protein; movement protein 3a; RNA3. XX OS Cucumber mosaic virus (cucumber mosaic cucumovirus) OC Viruses; Riboviria; Bromoviridae; Cucumovirus. XX RN [1] RP 1-2238 RA Chaumpluk P.; RT ; RL Submitted (10-NOV-1994) to the INSDC. RL Piyasak Chaumpluk, Iwate Biotechnology Research Center, Department of RL Genetic Engineering; 22-174-4 Narita, Kitakami, Iwate 024, Japan RL (Tel:0197-68-2911, Fax:0197-68-3881) XX RN [2] RP 1-2238 RA Chaumpluk P., Sasaki Y., Nakajima N., Nagano H., Nakamura I., Suzuki K., RA Mise K., Okuno T., Furusawa I.; RT "Phylogenetic relationships among ten Japanese strains of cucumber mosaic RT virus based on amino acid sequence alignment of 3a and coat proteins"; RL Unpublished. XX RN [3] RA Chaumpluk P., Sasaki Y., Nakajima N., Nagano H., Nakamura I., Suzuki K., RA Mise K., Inouye N., Okuno T., Furusawa I.; RT "Six new subgroup I members of Japanese cucumber mosaic virus as determined RT by nucleotide sequence analysis on RNA3's cDNAs"; RL Nippon Shokubutsu Byori Gakkaiho 62:40-44(1996). XX DR MD5; 819f0ca3493b22783ebfeb1e527b2633. DR EuropePMC; PMC112760; 10400773. DR EuropePMC; PMC3550734; 23637513. DR RFAM; RF01084; TLS-PK3. XX FH Key Location/Qualifiers FH FT source 1..2238 FT /organism="Cucumber mosaic virus" FT /strain="C7-2" FT /mol_type="genomic RNA" FT /clone="IWC7-2/119" FT /db_xref="taxon:12305" FT 5'UTR 1..130 FT CDS 131..970 FT /product="movement protein 3a" FT /note="putative cell to cell movement protein (CMV-CS 3a FT protein)" FT /db_xref="GOA:O40982" FT /db_xref="InterPro:IPR000603" FT /db_xref="UniProtKB/Swiss-Prot:O40982" FT /protein_id="BAA07674.1" FT /translation="MAFQGTSRTLTQQSSAATSDELQKILFSPDAIKKMATECDLGRHH FT WMRADNAISVRPLVPEVTHGSIASFFKSGYDAGELRSKGYMSVPQVLCAVTRTVSTDAE FT GSLRIYLADLGDKELSPIDGQCVSLHNHDLPALVSFQPTYDCPMETIGNRKRCFAVVIE FT RHGYIGYTGTTASVCSNWQARFSSKNNNYTHIAAGKTLVLPFNRLAEQTKPSAVARLLK FT SQLNNIESSQYVLSKAKINQNARSESEELNVESPSFAIGSSSASRSEAFRPQVVNGL" FT misc_feature 971..1280 FT /note="putative intercistronic region" FT misc_feature 1140..1152 FT /note="putative tRNA ICR2-like region" FT CDS 1281..1937 FT /product="coat protein" FT /note="putative coat protein CP" FT /db_xref="GOA:O40983" FT /db_xref="InterPro:IPR000247" FT /db_xref="InterPro:IPR023800" FT /db_xref="InterPro:IPR037137" FT /db_xref="UniProtKB/Swiss-Prot:O40983" FT /protein_id="BAA07675.1" FT /translation="MDKSESTSAGRNRRRRPRRGSRSAPSSADANFRVLSQQLSRLNKT FT LAAGRPTINHPTFVGSERCKPGYTFSSITLKPPKIDRGSYYGKRLLLPDSVTEFDKKLV FT SRIQIRVNPLPKFDSTVWVTVRKVPASSDLSVAAISAMFADGASPVLVNQYAASGVQAN FT NKLLYDLSAMRADIGDMRKYAVLVYSKDDALETDELVLHVDIEHQRIPTSGVLPV" FT misc_feature 2086..2238 FT /note="tRNA-like structure" XX SQ Sequence 2238 BP; 515 A; 528 C; 536 G; 659 T; 0 other; gtaatctaca ctgtgtgtgt gcgtgtgtgt gtgtgtgtgt cgcgtcgtgt cgagtcgtgt 60 tgtccgcaca tttgagtcgt gctgtccgca cattttatct attagtgtgg tgtgttagat 120 ttgccgaggc atggctttcc aaggtaccag taggacttta actcaacagt cctcagcggc 180 tacgtccgac gaacttcaaa agatattatt tagccctgat gccattaaga aaatggctac 240 tgagtgtgac ctaggccggc atcactggat gcgcgccgat aacgctattt cagtccgacc 300 cctcgttccc gaagtaaccc atggaagtat tgcatccttc tttaagtctg gatatgatgc 360 tggtgaatta cgctctaaag gatatatgag cgtccctcaa gtgttgtgtg ctgttactcg 420 aacagtttcc accgatgctg aaggatcttt gagaatttac ctagctgatt taggtgataa 480 ggagttatct cctatagatg ggcaatgcgt ttcattacat aaccatgatc ttcccgcttt 540 ggtgtctttc caaccgacgt atgattgtcc tatggagacg attgggaatc gtaagcggtg 600 tttcgctgtt gttatcgaaa gacatggtta tattgggtat accggcacca cagctagcgt 660 gtgtagtaat tggcaagcac ggttttcttc taagaataac aactacactc atatcgcagc 720 tgggaagact ctagtactac ctttcaacag attagctgag caaacaaaac cgtcggctgt 780 cgctcgcctg ttgaagtcgc agcttaacaa tattgaatct tcgcagtacg tcctatcaaa 840 agcgaagatt aatcagaatg cgcgtagtga gtccgaggaa ttgaatgttg agagcccttc 900 cttcgcaatc gggagttctt ccgcgtcccg ctccgaagcc tttagaccgc aggtggttaa 960 cggtctttag cactttagtg ctttcgttgc gtattagtgt atatatctac ttatgagtct 1020 acatagtatg tatataccta tagtgtcctg tgtgagttga tacagttgac aactgtgacg 1080 cgatgccgtg ttgagaagag aacacatctg gttttagtaa gtccacatca taactttgag 1140 gttcaattcc tctcgttccc tgttgggctc cttacttttt catggatgct tctccacgag 1200 attgcgtttc gtctactgat tatctataga gtctgtgtgt gctgtgtttt ctcttttgtg 1260 tcgtagaatt gagtcgagtc atggacaaat ctgaatcaac cagtgctggt cgtaaccgtc 1320 gacgtcgtcc gcgtcgtggt tcccgctccg ccccctcctc cgcggatgct aactttagag 1380 tcttgtcgca gcaactttcg cgactaaaca agacgttagc agctggtcgt ccaaccatta 1440 accacccaac ctttgtgggg agtgaacgct gtaaacctgg gtacacgttc tcatctatta 1500 ccctgaagcc accgaaaata gaccgtgggt cttattatgg taaaaggttg ttattacctg 1560 attcagtcac ggagttcgat aagaaacttg tttcgcgcat tcaaattcga gttaatcctt 1620 tgccgaaatt tgattctacc gtgtgggtta cggtccgtaa agttcctgcc tcctcggacc 1680 tatccgtcgc cgccatctct gctatgtttg cggacggagc ctcaccggta ctggttaatc 1740 agtatgctgc atccggcgtc caagccaaca acaagttgtt gtatgatctt tcagcgatgc 1800 gagctgatat tggcgacatg agaaagtacg ccgtcctcgt gtattcaaaa gacgatgcgc 1860 tcgagacgga tgaactggta cttcatgtcg acattgagca ccaacgcatt cccacgtctg 1920 gagtgctccc agtgtgaatc cgtgttttcc cagaacctcc ctccgatttc tgtggcggga 1980 gctgagttgg cagttctgct ataaactgtc tgaagtcact aaacgtttta cggtgaacgg 2040 gttgtccatc cagcttacgg ctaaaatggt cagtcgtgga gaaatctacg ccagcagatt 2100 tacaaatctc tgagacgcct ttgaaaccat ctcctaggtt tcttcggaag gacttcggtc 2160 cgtgtacttc tagcacaaga tgctagtttc agggtacagg tgccccccca ctctcgtggg 2220 ggcctccaaa ggagacca 2238 //