ID D38444; SV 1; linear; genomic RNA; STD; VRL; 6303 BP. XX AC D38444; XX DT 12-OCT-1994 (Rel. 41, Created) DT 26-JUN-2008 (Rel. 96, Last updated, Version 6) XX DE Youcai mosaic virus genomic RNA, complete sequence. XX KW . XX OS Youcai mosaic virus OC Viruses; Riboviria; Virgaviridae; Tobamovirus. XX RN [1] RP 1-6303 RA Naito S.; RT ; RL Submitted (29-SEP-1994) to the INSDC. RL Contact:Satoshi Naito Hokkaido University, Faculty of Agriculture, RL Department of Applied Bioscience; Kita-9, Nishi-9, Kita-ku, Sapporo, RL Hokkaido 060, Japan XX RN [2] RP 1-6303 RX DOI; 10.1023/A:1007945723588. RX PUBMED; 9608662. RA Yamanaka T., Komatani H., Meshi T., Naito S., Ishikawa M., Ohno T.; RT "Complete nucleotide sequence of the genomic RNA of tobacco mosaic virus RT strain Cg"; RL Virus Genes 16(2):173-176(1998). XX DR MD5; 3b00725d793a56d5cd9eee90c0fb7d72. DR EuropePMC; PMC2654919; 19308254. DR EuropePMC; PMC4597857; 26237414. DR RFAM; RF00225; IRES_Tobamo. DR RFAM; RF01072; TMV_UPD-PK3. XX FH Key Location/Qualifiers FH FT source 1..6303 FT /organism="Youcai mosaic virus" FT /strain="crucifer strain Cg" FT /mol_type="genomic RNA" FT /db_xref="taxon:228578" XX SQ Sequence 6303 BP; 1810 A; 1178 C; 1568 G; 1747 T; 0 other; gttttatttt tattgcaaca acaacaacaa atttcaataa caacaaaaca aatacaaaca 60 acaacaacat ggcacaattt caacaaacag taaacatgca gacgttgcag gctgccgcag 120 ggcgcaacag cctggtgaat gatttagcct ctcgacgcgt ttatgataat gctgttgaag 180 agctgaatgc acgctcgaga cgccctaagg tccatttctc caagtcagtg tctacggaac 240 agacgctact agcttcaaac gcttatccgg agtttgagat ttctttcact catacccagc 300 aagcagtaca ctccctcgcg ggtggcttaa ggactcttga gttagagtat ctcatgatgc 360 aagttccgtt cggttctctt acgtacgaca taggtggtaa cttcgccgcg caccttttta 420 agggacgcga ttacgttcac tgctgtatgc cgaatttgga tgttcgcgat atagctcgtc 480 acgaagggca caaggaggcg atcttcagtt acatttcccg cctagatagg cagagacgtc 540 cggtccccga ataccagaga gcggcgttca ataattacgc agagaaccct catttcgtcc 600 attgtgatcg accttttcaa cagtgcaagc taagcgccgc taacggagcg gacacttacg 660 ctatagcgct tcatagtata tatgatattc ctgttgatga gttcggtgct gcattgctta 720 ggaagaatgt caagatttgt tacgcggcct tccatttcca tgagaatatg cttctggatt 780 gtgattctgt cacccttgag gatatcggag ctacattcca gcgtgctggc gacaaattga 840 acttcttctt ccacaacgaa agcacactca attacaccca tagttttagt aatataatta 900 agtacgtgtg taaaaccttt tttcccgcga gtcaacgtta cgtgtaccat aaggagtttt 960 tagttacgag agttaatacg tggtattgta agtttactag agtcgacact tttactcttt 1020 tccgtggtgt gtatagatcg agtgtagata gcgaagagtt ctataaggct atggacgacg 1080 catgggagta caagaagacc ttggctatgc tcaactctga gaggactatc ttcaaggaca 1140 gcgcagctat gaatttctgg tttccgaagg tcagagatat ggttatcata cctctattcg 1200 acgcatccat tacaactgga aggatgtcga gaagggaagt tttggtaaac aaggattttg 1260 tttacacggt ccttaaccat attaaaactt atcaagctaa agccttaact tacgcaaatg 1320 tactttcttt cgtcgagtct attagatcta gagtcataat taacggtgtc actgccaggt 1380 cggaatggga taccgacaag gcaattttag gtccattagc gatgaccttt ttccttgtta 1440 caaagttgag tcatgttcag gacgaaatcg tcctcaaaaa gttccaaaag tttgacgcta 1500 ctaccaaaga attgatttgg acaagtctct gcgatgccct gaagggggta ataccctcgg 1560 tcaaagagac gcttgcgcgt ggtggtttcg ttaaacttgc tgaagagagt ttggagatca 1620 aaattccaga gttatactgc acttttaccg acaggttggt gcttcagtat aagatggcag 1680 aggagtttaa gtcgtgtgat ctgtcaaaac ctttggaaga gtctgagaaa tactataacg 1740 cgttatccga gctgtctgtg ctcgaaaatc tcgactcatt tgatctggat ggttttaagg 1800 aattatgtca aaagaagaat gtcgatccgg atgtggcagc gaaggtggtg gtggcgatca 1860 tgaatagcga gttgacgtta ccgttcaaga aacctacaga ggaggaaatt gctgaggcgc 1920 ttagtggaga agtgaaacag agtgaggggt tgagtttgag taacaacgca cctttcccat 1980 gtgtgaacaa tctcaaggaa ggtttggttc cggcgtatgg ggtgtgtccg actggtggta 2040 acttcgacag aatggatata gacatatctg agttccatct caagagtgta gatgcagtta 2100 aaaagggggc tatgatgtca gcggtgtaca cgggaaagat taaggttcag cagatgaaga 2160 actacgtcga ttacctaagt gcatcgctgt cagctacggt ctcaaacctc tgcaaagtgc 2220 ttagggatgt tcacggtgtt gattctgaat cccaagagaa gtcaggtgtg tgggatgtgc 2280 gaagaggacg ttggttacta aaacctaacg cgaaatgtca cgcttggggt gttgcggaag 2340 atgctaacca taagttagtc atcgtgttgc tcaactggga tgaaggaaaa cctgtctgcg 2400 atgagacatg gtttagattg gcggtttcta gcgattcact agtgtactct gatatgggaa 2460 aactcaagac gttaacggca tgttgcagag atggagaacc tccggagcct acagcgaagg 2520 tagtgctcgt tgacggtgtt ccaggctgtg ggaaaacaaa ggaaatcttg gagaaggtta 2580 acttttctga agatttagtg ttagttcctg gaaaagaggc gtctaagatg atcattcgaa 2640 gagcgaacca agcaggcatt ataagagctg acaaggataa cgtaaggaca gtcgattcct 2700 tcttgatgca ccctccaaag agggaattta agagattgtt tatcgacgaa ggattaatgt 2760 tacacacagg ttgtgttaac tttttaacgt tactgtctca ttgcgaggtg gcctacgttt 2820 atggtgatac acaacagatc cccttcattt gtagggtagc aaattttcct tatcctaaac 2880 attttgcgaa gcttgttgta gacgaaaagg aggacaggag ggtcacgctt aggtgtccgg 2940 cggatgttac attcttcttg aacaagaagt atgatggtgc ggtactgtgt acaagttccg 3000 tggagaggtc agtcagtgcg gaggttgtga gaggaaaagg tgctttaaac ccaataactt 3060 taccgttaga gggaaagatt ctcaccttta cacaggccga taagttcgag ttgttggata 3120 aaggctacaa ggatgtgaat acggtccatg aggttcaagg tgaaacttac gaaaagacag 3180 ctattgttcg gttgactgcg actcctttag agatcatatc gagagcatca cctcatgttt 3240 tggtggcgtt gacaaggcac acaacacgat gtaaatatta cacggttgtg cttgacccaa 3300 tggtgaatgt gatttccgaa atggagaaac tatccaactt tatccttgac atgtacaagg 3360 ttgagtcggg gacccaatag caattacaga tcgacacagt gttcaaaggg acaaacctgt 3420 tcgtcccaac gcctaagtct ggagattggc gagacatgca gttctactat gacactcttc 3480 ttcctggtaa cagtactatt cttaacgaat ttgatgctgt tacgatgaat ttgagggata 3540 tttccttaaa tgttaaggac tgtaggatcg atttttcaaa atcagtgcaa ttaccgagag 3600 aacgaccgat ttttatgaaa cccaaattac ggaccgcagc agaaatgccg cgtaccgctg 3660 ggctacttga aaatcttgtc gcaatgatca aaagaaacat gaatgcacca gacttgacgg 3720 gaacgattga tatagaggac actgcgtcgt tagtggttga gaagttttgg gatgcgtatg 3780 tggtgaagga attcagcgga acagacggaa tggctatgac aagggaaagt ttttctagat 3840 ggctctctaa acaagagtca tctactgtcg gtcagctagc ggatttcaac tttgtggatt 3900 tgccggcggt ggacgagtat aagcatatga tcaagagtca acctaagcaa aaattggact 3960 tgagtataca ggatgagtac cctgcattgc agactatagt ctatcattcg aagaagatca 4020 atgcgatttt tggtcctatg ttctcagaat tgacgaggat gcttcttgaa agaatcgata 4080 cttccaagtt cctgttttat accaggaaga cgcctacgca gattgaagag tttttctctg 4140 atctagattc gtcacaagct atggaaatct tggagcttga catttcaaag tatgacaagt 4200 ctcaaaacga gtttcattgc gctgtggagt acaaaatatg ggaaaagctt ggaatcgatg 4260 attggttagc ggaagtgtgg agacaaggac acaggaaaac gactcttaaa gactacacgg 4320 ctggaattaa aacatgcttg tggtatcaaa ggaaaagcgg tgacgtaact accttcattg 4380 ggaacacgat tatcattgca gcatgtttga gttctatgat cccgatggat aaagtgatca 4440 aggcggcctt ctgcggtgac gacagtttga tatatattcc gaaaggtttg gacctgccgg 4500 atattcaagc tggagccaac cttacgtgga atttcgaggc caaattgttc aggaagaagt 4560 acgggtattt ctgcggtcga tacgtcattc accatgacag aggagcaatt gtatattatg 4620 atccgcttaa gttgatatct aaattaggtt gtaaacatat tagagatgaa gttcacttag 4680 aagagttgcg tagatctctg tgtgatgtaa ctagtaattt aaataattgt gcgtattttt 4740 cacagttaga tgaggccgtt gccgaggtcc ataagaccgc ggttggcgga gcgtttgttt 4800 actgtagtat aattaaatat ttgtcagata aaaggttgtt taaagatttg ttttttgttt 4860 gactgagtca ataatgtctt acgagcctaa agtgagcgac ttccttgctc ttacgaaaaa 4920 ggaggaaatt ttacccaagg cttttacgag gttaaagact gtctctatta gtactaagga 4980 tgttatatct gttaaggatt ctgagtccct gtgtgatata gatttactag ttaatgtgcc 5040 attagataag tatagatatg tgggtgtttt aggtgttgtt tttaccggtg agtggttagt 5100 gccggatttc gttaaaggtg gagtaacagt gagcgtgatt gacaaacggc ttgaaaactc 5160 caaagagtgc ataattggta cgtacagagc tgctgcgaaa gacaaaaggt tccagttcaa 5220 gctggttcca aattacttcg tgtctgttgc agatgccaag cgaaaaccgt ggcaagttca 5280 tgtgcgtatt caaaatttaa ggattgaagc tggatggcaa cctctggcct tagaggtggt 5340 ttctgttgct atggtcacta ataacgtggt tgttaagggt ttgagagaaa aggtcatcgc 5400 agtgaatgat ccgaatgtcg aaggtttcga aggcgtggtt gacgatttcg tcgattcggt 5460 cgcagcattc aaggcggttg acactttcag aaagaaaaag aaaaggattg gaggaaagga 5520 tgtaaataat aataagttta gatatagacc ggagagatac gccggtcagg attcgttaaa 5580 ttataaagaa gaaaatgtct tacaacatca cgagctcgaa tcagtaccag tatttcgcag 5640 cgatgtgggc agagcccaca gcgatgctta accagtgcgt gtccgcgttg tcgcaatcgt 5700 atcaaactca ggctgcaaga gatactgtta ggcaacagtt ctcaaacctg ctaagtgcga 5760 ttgtgacacc aaaccagcgg tttccagata caggataccg ggtgtttatt aattcagcag 5820 ttctaaaacc gttgtacgag tctcttatga agtcctttga tactagaaat aggatcatcg 5880 aaactgaaga agagtcgcgt ccatcggctt ccgaagtagc taatgcaaca caacgtgttg 5940 atgatgcaac cgtggccatc aggagtcaaa ttcagctttt gctgaacgag ctctccaacg 6000 gacatggtct gatgaacagg gcagagttcg aggttttatt accttggact actgctccgg 6060 ctacataggc gtggtgcaca cgatagtgca tagtgttttt ctctccactt aaatcgaaga 6120 gatatactta cggtgtaaat ccgtaagggt gacgtaaacc aaattacgta atgttttagg 6180 ttccatttaa atcgaaacct gttatttcct ggatcacctg ttaacgtacg cgtggcgtat 6240 attacagtgg gaataactaa aagtgagagg ttcgaatcct ccctaacccc gggtaggggc 6300 cca 6303 //