ID   D28780; SV 1; linear; genomic RNA; STD; VRL; 2214 BP.
XX
AC   D28780;
XX
DT   30-MAR-1994 (Rel. 39, Created)
DT   31-MAY-2008 (Rel. 96, Last updated, Version 6)
XX
DE   Cucumber mosaic virus genes for 3a, coat protein, complete cds, segment 3.
XX
KW   .
XX
OS   Cucumber mosaic virus (cucumber mosaic cucumovirus)
OC   Viruses; Riboviria; Bromoviridae; Cucumovirus.
XX
RN   [1]
RP   1-2214
RA   Hsu Y.-H.;
RT   ;
RL   Submitted (02-MAR-1994) to the INSDC.
RL   Contact:Yau-Heiu Hsu National Chung Hsing University, Agricultural
RL   Biotechnology Lab.; 250 Kuo-Kung Road, Taichung, Taiwan 402, RC
XX
RN   [2]
RX   DOI; 10.1007/BF01384346.
RX   PUBMED; 7503683.
RA   Hsu Y.-H., Wu C.W., Lin B.Y., Chen H.Y., Lee M.F., Tsai C.H.;
RT   "Complete genomic RNA sequences of cucumber mosaic virus strain NT9 from
RT   Taiwan";
RL   Arch. Virol. 140(10):1841-1847(1995).
XX
DR   MD5; 057029bc23e6ba14434669d4450dba36.
DR   EuropePMC; PMC110906; 11044076.
DR   EuropePMC; PMC112760; 10400773.
DR   EuropePMC; PMC136033; 11884564.
DR   EuropePMC; PMC3550809; 23730005.
DR   EuropePMC; PMC416521; 15163757.
DR   EuropePMC; PMC4188193; 25674612.
DR   RFAM; RF01084; TLS-PK3.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2214
FT                   /organism="Cucumber mosaic virus"
FT                   /segment="3"
FT                   /strain="NT9"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12305"
FT   CDS             122..973
FT                   /codon_start=1
FT                   /product="3a"
FT                   /db_xref="GOA:O40979"
FT                   /db_xref="InterPro:IPR000603"
FT                   /db_xref="UniProtKB/Swiss-Prot:O40979"
FT                   /protein_id="BAA21696.1"
FT                   /translation="MAFQGTSRTLTQQSSAATSDELQKILFSPEAIKKMATECDLGRHH
FT                   WMRADNAISVRPLVPEVTHGRIASFFKSGYDAGELSSKGYMSVPQVLCAVTRTVSTDAE
FT                   GSLRIYLADLGDKELSPIDGQCVTLHNHDLPALVSFQPTYDCPMETVGNRKRCFAVVIE
FT                   RHGYIGYTGTTASVCSNWQARFSSKNNNYTHIAAGKTLVLPFNRLAEQTKPSAVARLLK
FT                   SQLNNIESSQYVLTNAKINQNARSESEELNVESPPIAIGSSSASRSETFRPQVVNGTLV
FT                   FS"
FT   CDS             1255..1911
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:O40980"
FT                   /db_xref="InterPro:IPR000247"
FT                   /db_xref="InterPro:IPR023800"
FT                   /db_xref="InterPro:IPR037137"
FT                   /db_xref="UniProtKB/Swiss-Prot:O40980"
FT                   /protein_id="BAA21697.1"
FT                   /translation="MDKSESTSAGRNRRRRPRRGSRSAPSSADANFRVLSQQLSRLNKT
FT                   LAAGRPTINHPTFVGSERCKPGYTFTSITLKPPKIDRGSYYGKRLLLPDSVTEFDKKLV
FT                   SRIQIRVNPLPKFDSTVWVTVRKVSASSDLSVAAISAMFADGASPVLVYQYAASGVQAN
FT                   NKLLYDLSAMRADIGDMRKYAVLVYSKDDALETDELVLHVDIEHQRIPTSGVLPV"
XX
SQ   Sequence 2214 BP; 508 A; 520 C; 535 G; 651 T; 0 other;
     gtaatcttac cactgtgtgt gtgcgtgtgt gtgtgtgtcg cgtcgtgtcg agtcgtgttg        60
     tccgcacatt tgagtcgtgc tgtccgcaca ttttcttttc agtgtgttag attcccgagg       120
     tatggctttc caaggtacca gtaggacttt aactcaacag tcctcagcgg ctacgtctga       180
     cgaacttcaa aagatattat ttagccctga agccattaag aagatggcta ctgagtgtga       240
     cctaggccgg catcattgga tgcgcgctga taatgctatt tcagtccggc ccctcgttcc       300
     cgaagtaacc catggtcgta ttgcttcttt ctttaagtct ggatatgatg ctggtgaatt       360
     aagctctaaa ggatatatga gcgttcctca agtgttgtgt gctgttactc gaacagtctc       420
     caccgacgct gagggatctt tgagaattta cctagctgat ttaggcgaca aggagttatc       480
     tcctatagat ggacagtgcg tcacattaca taaccatgat ctacccgctt tagtgtcttt       540
     ccaaccgacg tatgattgtc ctatggaaac tgttgggaat cgtaagcggt gttttgctgt       600
     cgttatcgaa agacatggtt atattgggta taccggcacc acagctagcg tgtgtagtaa       660
     ttggcaagca cggttttctt ctaagaataa caactacact cacatcgcag ctgggaagac       720
     tctagtactg ccgttcaaca gattagctga gcaaacgaaa ccgtcagccg tcgctcgcct       780
     gttgaagtcg caattgaaca acatagaatc ttcgcaatac gttttaacga atgcgaagat       840
     caatcagaat gcgcgcagtg agtccgagga attaaatgtt gagagccctc ctatcgcaat       900
     cgggagttct tccgcgtccc gctccgaaac cttcagaccg caggtggtta acggtacttt       960
     agtgttttcg tagcgtttta gtatataagt atatgtgagt ctgtacataa tactatatct      1020
     atagtgtcct gtgtgagttg atacagtaga cactgtgacg cgatgttgtg ttgagaagag      1080
     agcacatctg gttttagtaa acccacaaca tatctttgag gttcaattcc tctcgttccc      1140
     tgttgggccc ctttactttt tcatggatgc ttctccacga gattgcgttt cgtctactta      1200
     tcctaagagt attgtgttgt gttttctctt tgtgtagtag aattgagtcg agtcatggac      1260
     aaatctgaat caaccagtgc cggtcgtaat cgtcgacgtc gtccgcgtcg tggttcccgc      1320
     tccgctccct cctccgcgga tgctaacttt agagtcttgt cgcagcagct ttcgcgactt      1380
     aacaagacgt tagcagctgg tcgtccaact attaaccacc caacctttgt gggtagtgaa      1440
     cgctgtaaac ctgggtacac gttcacatct attaccctga agccgccgaa aatagaccgc      1500
     gggtcttatt atggtaaaag gttgttgcta cctgattcag tcacggagtt cgataagaag      1560
     cttgtttcgc gcattcaaat tcgagttaat cctttgccga aatttgattc taccgtgtgg      1620
     gtgacagtcc gtaaagtttc tgcctcctcg gacttatccg ttgccgctat ctctgctatg      1680
     tttgcggacg gagcctcacc ggtactggtt tatcagtatg ctgcatccgg cgttcaagcc      1740
     aacaacaaat tgttgtacga tctttcggcg atgcgcgctg atattggcga catgagaaag      1800
     tacgccgtcc tcgtgtattc aaaagacgat gcgctcgaga cggacgagtt ggtacttcat      1860
     gttgacatcg agcaccaacg cattcccaca tctggggtgc tcccagtttg aatccgtgtt      1920
     tttcccagaa tcctccctcc ggtcctgtgg cgggagctga gttggtagtg ttactataaa      1980
     ctgcctgaag tcactaaacg ctttgcggtg aacgggttgt ccatccagct tacggctaaa      2040
     atggtcagtc gtggagaaat ccacgccagt agacttacaa gtctctgagg tgcctttgaa      2100
     accatctcct aggtttcttc ggaaggactt cggtccgtgt acttctagca caaggtgcta      2160
     gttttagggt acgggcatcc ccccacttca gtgggggtct ctcaaaggag acca            2214
//