ID   D28559; SV 1; linear; genomic RNA; STD; VRL; 405 BP.
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AC   D28559;
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DT   18-MAY-1994 (Rel. 39, Created)
DT   30-OCT-2004 (Rel. 81, Last updated, Version 6)
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DE   Cucumber mosaic virus satellite RNA, complete genome, clone: pKN-sat.
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KW   .
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OS   Cucumber mosaic virus satellite RNA
OC   Viruses; Satellites; RNA satellites; Single stranded RNA satellites;
OC   Small linear single stranded RNA satellites.
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RN   [1]
RP   1-405
RA   Hidaka S.;
RT   ;
RL   Submitted (17-FEB-1994) to the INSDC.
RL   Soh Hidaka, Tohoku National Agricultural Experiment Station;
RL   Shimo-kuriyagawa, Morioka, Iwate, 020-01, Japan (Tel:81-196-43-3514,
RL   Fax:81-196-43-3514)
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RN   [2]
RP   1-405
RX   DOI; 10.1006/viro.1994.1246.
RX   PUBMED; 7513924.
RA   Hidaka S., Hanada K.;
RT   "Structural features unique to a new 405-nucleotide satellite RNA of
RT   cucumber mosaic virus inducing tomato necrosis";
RL   Virology 200(2):806-808(1994).
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DR   MD5; beced9ead4d03bc5aeda73e13ba9be47.
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FH   Key             Location/Qualifiers
FH
FT   source          1..405
FT                   /organism="Cucumber mosaic virus satellite RNA"
FT                   /mol_type="genomic RNA"
FT                   /clone="pKN-sat"
FT                   /note="isolated from Cucumber mosaic virus strain KN"
FT                   /note="lethal necrosis"
FT                   /db_xref="taxon:12436"
FT   primer_bind     order(1..20,complement(387..405))
FT                   /PCR_conditions="20 cycle program of 94degC for 1 min,
FT                   45degC for 1 min, and 72degC for 30 sec."
FT   stem_loop       19..45
FT   stem_loop       70..127
FT   misc_feature    352..367
FT                   /note="necrogenic consensus sequence"
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SQ   Sequence 405 BP; 89 A; 98 C; 115 G; 103 T; 0 other;
     gttttgtttg atagagaatt gcgcggaggg gatatatctg cgtgaggatc tatcactagg        60
     cggtgtgggt tacctccctg ggtagctgca tggtggtgac agcccacctg tagtccgggt       120
     tgagtgacgc atctcggact ggggacctct ggcgaattaa gtagctaagt ccgctgccca       180
     cgatggtggg atacctccta acggaggcta tttttcagct ctgcgcattt catttgagcc       240
     cccgctcagt ttgctaacaa gacccggcac atggttcgcc gttaccatgg acaaattcga       300
     aagaaacact ctgtaaggtg gtatcagtga cgacgcacgc agggagaggc taaggcttat       360
     gctatgctga tctccgtgaa tgtctaacat tcctctacag gaccc                       405
//