ID   D28488; SV 1; linear; genomic RNA; STD; VRL; 2219 BP.
XX
AC   D28488;
XX
DT   31-MAY-1996 (Rel. 47, Created)
DT   07-JUL-2003 (Rel. 76, Last updated, Version 6)
XX
DE   Cucumber mosaic virus RNA3, complete sequence.
XX
KW   3a; coat protein; CP; movement protein.
XX
OS   Cucumber mosaic virus (cucumber mosaic cucumovirus)
OC   Viruses; Riboviria; Bromoviridae; Cucumovirus.
XX
RN   [1]
RP   1-2219
RA   Chaumpluk P.;
RT   ;
RL   Submitted (04-FEB-1994) to the INSDC.
RL   Piyasak Chaumpluk, Iwate Biotechnology Research Center, Department of
RL   Genetic Engineering; 22-174-4 Narita, Kitakami, Iwate 024, Japan
RL   (Tel:0197-68-2911, Fax:0197-68-3881)
XX
RN   [2]
RA   Chaumpluk P., Sasaki Y., Nakajima N., Nagano H., Nakamura I., Suzuki K.,
RA   Mise K., Inouye N., Okuno T., Furusawa I.;
RT   "Six new subgroup I members of Japanese cucumber mosaic virus as determined
RT   by nucleotide sequence analysis on RNA3's cDNAs";
RL   Nippon Shokubutsu Byori Gakkaiho 62:40-44(1996).
XX
DR   MD5; 4156285456ba876e5435341804a83386.
DR   EuropePMC; PMC112760; 10400773.
DR   EuropePMC; PMC3550734; 23637513.
DR   RFAM; RF01084; TLS-PK3.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2219
FT                   /organism="Cucumber mosaic virus"
FT                   /segment="3"
FT                   /strain="Pepo"
FT                   /mol_type="genomic RNA"
FT                   /clone="P3/2-7"
FT                   /db_xref="taxon:12305"
FT   5'UTR           1..121
FT   CDS             122..961
FT                   /codon_start=1
FT                   /product="movement protein"
FT                   /db_xref="GOA:Q89785"
FT                   /db_xref="InterPro:IPR000603"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q89785"
FT                   /protein_id="BAA05848.1"
FT                   /translation="MAFQGTSRTLTQQSSAATSDDLQKILFSPEAIKKMATECDLGRHH
FT                   WMRADNAISVRPLVPEVTHGRIASFFKSGYDVGELCSKGYMSVPQVLCAVTRTVSTDAE
FT                   GSLRIYLADLGDKELSPIDGQCVSLHNHDLPALVSFQPTYDCPMETVGNRKRCFAVVIE
FT                   RHGYIGYTGTTASVCSNWQARFSSKNNNYTHIAAGKTLVLPFNRLAEQTKPSAVARLLK
FT                   SQLNNIESSQYLLTNVKINQNARSESEELNVESPPAAIGSSSASRSEAFRPQVVNGL"
FT   misc_feature    962..1261
FT                   /note="put. inter-cistronic region"
FT   misc_feature    1119..1131
FT                   /note="put. tRNA ICR2-like region"
FT   CDS             1262..1918
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q66141"
FT                   /db_xref="InterPro:IPR000247"
FT                   /db_xref="InterPro:IPR023800"
FT                   /db_xref="InterPro:IPR037137"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q66141"
FT                   /protein_id="BAA05849.1"
FT                   /translation="MDKSESTGAGRNRRRRPRRGSRSAPSSADANFRVLSQQLSRLNKT
FT                   LAAGRPTINHPTFVGSERCKPGYTFTSITLKPPKIDRESYYGKRLLLPDSVTEYDKKLV
FT                   SRIQIRVNPLPKFDSTVWVTVRKVPASSDLSVAAISAMFADGASPVLVYQYAASGVQAN
FT                   NKLLYDLSAMRADIGDMRKYAVLVYSKDDTLETDELVLHVDVEHQRIPTSGVLPV"
FT   misc_feature    2089..2219
FT                   /note="tRNA-like structure"
XX
SQ   Sequence 2219 BP; 513 A; 526 C; 531 G; 649 T; 0 other;
     gtaatcttac cactgtgtgt gtgcgtgtgt gtgtgtcgag tcgtgttgtc cgcacatttg        60
     agtcgtgtgt cccgcacatt ttattttatt ctttcataca gtgtgttaga tttcccgagg       120
     catggctttc caaggtacca gtaggacttt aactcaacag tcctcagcgg ctacgtctga       180
     cgatcttcaa aagatattat ttagccctga agccattaag aaaatggcta ctgagtgtga       240
     cctaggccgg catcattgga tgcgcgctga taatgctatt tcagtccggc ccctcgttcc       300
     cgaagtaacc cacggtcgta ttgcttcctt ctttaaatct ggatatgatg ttggtgaatt       360
     atgctcaaaa ggatacatga gcgtccctca ggtgttgtgt gctgttactc gaacggtttc       420
     cactgatgct gaagggtcct tgagaattta cttagctgat ctaggtgaca aggagttatc       480
     tcccatagat gggcaatgcg tttcgttaca taaccatgat cttcccgctt tggtgtcctt       540
     ccaaccgacg tatgactgtc ctatggaaac agttgggaat cgcaagcggt gttttgctgt       600
     cgttatcgaa agacatggtt acattgggta taccggtacc acagctagcg tgtgtagtaa       660
     ttggcaagca aggttttctt ctaagaataa caactacact catatcgcag ctgggaagac       720
     tctagtactg cctttcaaca gattagctga gcaaacaaaa ccgtcagctg tcgctcgcct       780
     gttgaagtcg caactgaaca acattgaatc ttcgcaatat ctgttaacga atgtgaagat       840
     taatcagaat gcgcgcagtg agtccgagga attaaatgtt gagagccctc ccgccgcaat       900
     cgggagttct tccgcgtccc gctccgaagc cttcagaccg caggtggtta acggtcttta       960
     gcactttggt gcgtattagt atataagtat ttgtgtgtct gtacataata ctatatctat      1020
     agtgtcctgt gtgagttgat acagtagaca tctgtgacgc gatgccgtgt tgagaaggga      1080
     acacatctgg ttttagtaag cctacatcac agttttgagg ttcaattcct cttactccct      1140
     gttgagcccc cttactttct catggatgct tctccgcgag attgcgttat tgtctactga      1200
     ctatatagag agtgtgtgtg tgctgtgttt tctcttttgt gtcgtagaat tgagtcgagt      1260
     catggacaaa tctgaatcaa ccggtgctgg tcgtaaccgt cgacgtcgtc cgcgtcgtgg      1320
     ttcccgctcc gccccctcct ccgcggatgc caactttaga gtcttgtcgc agcagctttc      1380
     gcgacttaac aagacgttag cagccggtcg tccaactatt aaccacccaa cctttgtagg      1440
     gagtgaacgt tgtaaacctg ggtacacgtt cacatctatt accctaaagc caccaaaaat      1500
     agaccgtgag tcttattatg gtaaaaggtt gttattacct gattcagtca cggaatatga      1560
     taagaaactt gtttcgcgca ttcaaattcg agttaatcct ttgccgaaat ttgattctac      1620
     cgtgtgggtg acagtccgta aagttcctgc ctcctcggac ttatccgttg ccgccatctc      1680
     tgctatgttt gcggacggag cctcaccggt actggtttat cagtatgctg catctggagt      1740
     tcaagctaac aacaaattgt tgtatgatct ttcggcgatg cgcgctgata taggcgacat      1800
     gagaaagtac gccgtcctcg tgtactcaaa agacgatacg ctcgagacgg acgagctggt      1860
     acttcatgtt gacgtcgagc accaacgcat tcccacgtct ggggtgctcc cagtctgatt      1920
     ccgtgttttc cagaaccctc cctccgattt ctgtggcggg agctgagttg gcagttctgc      1980
     tataaactgt ctgaagtcac taaacgtttt acggtgaacg ggttgtccat ccagcttacg      2040
     gctaaaatgg tcagtcgtgg agaaatccac gccagcagac ttacaagtct ctgaggcgcc      2100
     tttgaaacca tctcctaggt ttcttcggaa ggacttcggt ccgtgtactt ctagcacaat      2160
     gtgctagttt cagggtacgg gtgcccccca ctttcgtggg ggcctccaaa aggagacca       2219
//