ID D16368; SV 1; linear; genomic RNA; STD; VRL; 2956 BP. XX AC D16368; XX DT 29-MAR-1994 (Rel. 39, Created) DT 16-FEB-2008 (Rel. 94, Last updated, Version 4) XX DE Citrus tatter leaf virus (CTLV) genome, 3'-terminal region. XX KW . XX OS Citrus tatter leaf virus OC Viruses; Riboviria; Tymovirales; Betaflexiviridae; Trivirinae; OC Capillovirus. XX RN [1] RP 1-2956 RA Yoshikawa N.; RT ; RL Submitted (05-JUN-1993) to the INSDC. RL Contact:Nobuyuki Yoshikawa Iwate University, Bioscience and Technology; RL Ueda 3-18-8, Morioka, Iwate 020, Japan XX RN [2] RP 1-2956 RX PUBMED; 8277280. RA Yoshikawa N., Imaizumi M., Takahashi T., Inouye N.; RT "Striking similarities between the nucleotide sequence and genome RT organization of citrus tatter leaf and apple stem grooving capilloviruses"; RL J. Gen. Virol. 74:2743-2747(1993). XX DR MD5; 104e513928498947faace5c124df40e2. XX FH Key Location/Qualifiers FH FT source 1..2956 FT /organism="Citrus tatter leaf virus" FT /mol_type="genomic RNA" FT /db_xref="taxon:33759" FT CDS <1..2814 FT /codon_start=1 FT /product="ORF1" FT /db_xref="GOA:Q9YPI2" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR008879" FT /db_xref="UniProtKB/TrEMBL:Q9YPI2" FT /protein_id="BAA03869.1" FT /translation="NGCKIDILPFARQNVFPHHQSSDDVTFWAGVQKRIRKSNWRREKT FT KFEEFESQGKELLQEFISMLPFEFKVNIKDIEDGEKSFLEKRKLKSEKMWANHSERSDI FT DWKLDHAFLFMKSQYCTKEGKMFTEAKAGQTLACFQHIVLFRFGPMLRAIESAFLRSCG FT DSYYIHSGKNFFCLDSFVTRNAHVFDGFSIESDYTAFDSSQDHVILAFEMALLQYLGVS FT KEFQLDYLRLKLTLGCRLGSLAIMRFTGEFCTFLFNTFANMLFTQLKYKIDPRKHRILF FT AGDDMCSLSSLKRRRGERATRLMGSFSLTAVEEVRKFPMFCGWYLSPYGIIKSPKLLWA FT RIKMMSERQLLKECVDNYLFEAIFAYRLGERLYTILKEEDFEYHYLVIRFFVRNSKLLT FT GLSKSLIFEIGEGIGSEWRSSMSTISSRRSSQQTSRLTQSHPQNFTKMQPFSSQMCSIV FT SKDLSQMSKFPPGLGMDWSCQISSCLMTLKSTQSGKRATSTSTCITESFWLESKQCCQT FT SEVWKEGSLCMTEPVLIRKEAIYARICLSLSLTAVTSVLDLNTAYPPQMPTWRRDSDFV FT WTLTAHSMNRTLSCLLLTLVWPTDVLIQLVSWRPRLETQGGPRRLLVAVRHSDLMKKLK FT WQFWIISLHYFWRKVFQMFILKRGCSEVTRLEGHAQFLQKGGQTRNRRKREDLGPSQLE FT LKDSEKMSLEDVLQQARRHRVGVYLWKTHIDPAKELLTVPPPEGFKEGESFEGKELYLL FT LCNHYCKYLFGNIAVFGSSDKTQFPAVGFDTPPVHYNLTTTPKEGETEEQKKAREGSSG FT EKTKIWRIDLSNVVPELKTFAATSRQNSLNECTFRKLCEPFADLAREFLHERWSKGLAT FT NIYKKWPKAFEKSPWVAFDFATGLKMNRLTPDEKQVIDRMTKRLFRTEGQKGVFEAGSE FT SNLELEG" FT CDS 1248..2210 FT /codon_start=1 FT /product="ORF2" FT /db_xref="GOA:Q9YPI1" FT /db_xref="InterPro:IPR001815" FT /db_xref="InterPro:IPR028919" FT /db_xref="UniProtKB/TrEMBL:Q9YPI1" FT /protein_id="BAA03870.1" FT /translation="MAIVNVNHFLKEVESTDLKIDAISSSELYKDATFFKPDVLNCIKR FT FESNVKVSSRSGDGLVLSDFKLLDDTEIDSIRKKSNKYKYLHYGVILVGIKAMLPNFRG FT MEGRVIVYDGACLNPERGHICSYLFKFESDCCYFGLRPEHCLSTTDANLAKRFRFRVDF FT DCPQYEQDTELFALDIGVAYRCVNSARFLETKTGDSGWTSQAISGCEALRFNEEIKMAI FT LDHKSPLFLEEGVPNVHIEKRLFRGDKIRRSRSISAKRGPNSKPQEKRGFRSLSARIER FT FGENEFGRRASTSEAPPGRSVSLEDTYRPGKGTSDGSSP" FT polyA_site 2956 XX SQ Sequence 2956 BP; 865 A; 547 C; 720 G; 824 T; 0 other; aacgggtgca aaattgacat acttcctttt gctaggcaaa atgtttttcc tcatcatcag 60 tcctcagatg atgtcacttt ttgggcaggt gttcaaaaga ggataaggaa gtccaattgg 120 aggcgtgaaa aaacaaaatt tgaagaattt gagagtcagg ggaaagaact gctccaagag 180 tttatttcga tgttgccctt tgaattcaag gttaacatta aagacattga agatggagaa 240 aaaagcttcc tagaaaaaag gaaattgaag tcagaaaaaa tgtgggcgaa tcattcagaa 300 aggtctgaca tcgactggaa gcttgaccat gccttcctct ttatgaaatc acagtattgc 360 acgaaggaag ggaagatgtt caccgaggcg aaagccggcc aaactttggc ctgcttccag 420 catattgtct tgttcagatt cggacccatg ctcagagcaa ttgagagcgc ctttttaagg 480 agctgtgggg attcatacta catacactcc ggaaaaaact ttttctgcct agacagcttt 540 gtaacgagaa atgcacatgt ttttgatgga ttttcaatag agtccgacta cactgctttc 600 gattcatccc aggaccacgt cattttggcc ttcgagatgg cactattgca atatttgggt 660 gtatccaaag aatttcagct tgactatctg aggttgaagt tgactcttgg ttgtcgactt 720 gggtcattag caataatgag attcaccggg gaattttgca cctttctgtt caacacattt 780 gccaacatgc ttttcactca gttgaagtac aagatagacc cacggaaaca taggatctta 840 ttcgcagggg atgacatgtg ctccctgagc tctctcaaga ggagaagagg agaaagagca 900 acaaggttga tggggagctt ttccctaact gcggtggagg aagtgaggaa attccctatg 960 ttctgtggat ggtatttgag tccatatgga attatcaaat ctccaaaatt gttatgggcc 1020 aggattaaga tgatgagtga aagacagctc ctgaaagaat gcgttgacaa ctatctgttt 1080 gaggcaatat ttgcctacag gttaggtgag aggctgtaca caattttgaa agaagaagac 1140 ttcgaatatc attatcttgt tataagattc tttgtcagga attcaaagct gctaacgggt 1200 ttaagcaaga gcttgatttt cgaaattgga gaaggaattg ggtctgaatg gcgatcgtca 1260 atgtcaacca tttcctcaag gaggtcgagt caacagacct caagattgac gcaatctcat 1320 cctcagaact ttacaaagat gcaacctttt tcaagccaga tgtgctcaat tgtatcaaaa 1380 gatttgagtc aaatgtcaaa gtttcctcca ggtctgggga tggactggtc ttgtcagatt 1440 tcaagttgct tgatgacact gaaatcgact caatcaggaa aaagagcaac aagtacaagt 1500 acttgcatta cggagtcatt ctggttggaa tcaaagcaat gctgccaaac ttcagaggta 1560 tggaaggaag ggtcattgtg tatgacggag cctgtcttaa tccggaaaga ggccatatat 1620 gctcgtattt gtttaagttt gagtctgact gctgttactt cggtcttaga cctgaacact 1680 gcttatccac cacagatgcc aacctggcga agagattcag atttcgtgtg gactttgact 1740 gcccacagta tgaacaggac actgagttgt ttgctcttga cattggtgtg gcctacagat 1800 gtgttaattc agctcgtttc ttggagacca agactggaga ctcagggtgg acctcgcagg 1860 ctattagtgg ctgtgaggca ctcagattta atgaagaaat taaaatggca attttggatc 1920 ataagtctcc actatttctg gaggaaggtg ttccaaatgt tcatattgaa aagaggctgt 1980 tcagaggtga caagattaga aggtcacgct caatttctgc aaaaaggggg ccaaactcga 2040 aaccgcagga aaagagagga tttaggtccc tctcagctag aattgaaaga ttcggagaaa 2100 atgagtttgg aagacgtgct tcaacaagcg aggcgccacc gggtaggagt gtatctttgg 2160 aagacacata tagacccggc aaaggaactt ctgacggttc ctccccctga agggtttaag 2220 gaaggtgaaa gctttgaagg caaggagctt taccttcttc tttgcaacca ttattgtaaa 2280 tacttatttg gtaatattgc tgtttttggg tcatctgata agacccagtt tcctgctgtt 2340 ggatttgata cccctccggt tcattacaat ttgacaacga ccccaaaaga aggggaaact 2400 gaagagcaaa agaaggccag agagggttcg tctggcgaaa aaacaaaaat ttggagaatc 2460 gacttgtcaa atgttgtacc tgaattgaaa acctttgctg ccacttctag gcagaactct 2520 ttgaatgaat gtacattcag aaagctttgt gagccattcg ctgatttggc ccgtgagttt 2580 cttcatgaaa ggtggtcaaa aggattggcc actaacattt ataagaaatg gcccaaagct 2640 tttgaaaaaa gcccttgggt ggcatttgat tttgccaccg gtctaaaaat gaatcgttta 2700 acacctgatg agaaacaggt gatcgacagg atgaccaaaa ggctttttcg tactgaagga 2760 caaaaagggg ttttcgaggc aggttcggag agtaatctgg aactggaggg ttaggagtcg 2820 tgtgaaattc cgcaaatttg gtcgcggtct tgcaggttga catgcctgcc tttatactta 2880 aataaagggt tcacccggtt ttctgtgcat ttccgggtta gtgtggtttt tctagagtct 2940 agagtttgtc cactct 2956 //