ID   D13914; SV 1; linear; genomic RNA; STD; VRL; 1944 BP.
XX
AC   D13914; D00593;
XX
DT   17-DEC-1992 (Rel. 34, Created)
DT   09-SEP-2004 (Rel. 81, Last updated, Version 10)
XX
DE   Zucchini yellow mosaic virus gene for nuclear inclusion protein and coat
DE   protein.
XX
KW   .
XX
OS   Zucchini yellow mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1944
RA   Jerry S.L.;
RT   ;
RL   Submitted (15-DEC-1992) to the INSDC.
RL   Slightom L Jerry, The Upjohn Company; Molecular Biology Unit
RL   7242,Kalamazoo,MI 49007, U.S.A. (Tel:616-385-5304, Fax:616-385-7373)
XX
RN   [2]
RP   1-1944
RX   PUBMED; 2374006.
RA   Quemada H., Sieu L.C., Siemieniak D.R., Gonsalves D., Slightom J.L.;
RT   "Watermelon mosaic virus II and zucchini yellow mosaic virus: cloning of
RT   3'-terminal regions, nucleotide sequences, and phylogenetic comparisons";
RL   J. Gen. Virol. 71:1451-1460(1990).
XX
DR   MD5; ebd95ee8870c5801d467b5ce7e811b97.
XX
CC   In the longest ORF, there is a reading frame shift that probably
CC   occurs between position 335 and 345. They suggests that it is most
CC   likely an artifact of the recombinant DNA cloning procedure in (1).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1944
FT                   /organism="Zucchini yellow mosaic virus"
FT                   /strain="Florida"
FT                   /mol_type="genomic RNA"
FT                   /clone="pZYMV-15"
FT                   /note="512 bp upstream of BglII site."
FT                   /db_xref="taxon:12232"
FT   misc_feature    335..345
FT                   /note="reading frame shift region in translation"
FT                   /inference="non-experimental evidence, no additional
FT                   details recorded"
FT   CDS             <346..1733
FT                   /codon_start=3
FT                   /product="polyprotein precursor"
FT                   /db_xref="GOA:Q89329"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:Q89329"
FT                   /protein_id="BAA03010.1"
FT                   /translation="WNCEEIENKLVFFANGDDLILAVKDEDSGLLDNMSSSFSELGLNY
FT                   DFSERTHKREDLWFMSHQAILVDGMYIPKLEKERIVSILEWDRSKEIMHRTEAICAAMI
FT                   EAWGHTELLQEIRKFYLWFVEKEEVRELAALGKAPYIAETALRKLYTDKGAETSELARY
FT                   LQALHQDIFFEQGDTVMLQSGTQPTVADARVTKKDKEDDKGENKDFTGSGSGEKTVVAA
FT                   KKDKDVNAGSHGKIVPRLSKITKKMSLPRVKGNVILDIDHLLEYKPDQIELYNTRASHQ
FT                   QFASWFNQVKTEYDLNDQQMGVVMNGFMVWCIENGTSPDINGVWFMMDGNEQVEYPLKP
FT                   IVENAKPTLRQIMHHFSDAAEAYIEMRNAEAPYMPRYGLLRNLRDRSLARYAFDFYEVN
FT                   SKTPERAREAVAQMKAAALSNVSSRLFGLDGNVATTSEDTERHTARDVNRNMHTLLGVN
FT                   TMQ"
FT   mat_peptide     <346..893
FT                   /product="nuclear inclusion b"
FT   mat_peptide     894..1730
FT                   /product="coat protein"
FT   polyA_site      1944
XX
SQ   Sequence 1944 BP; 599 A; 359 C; 465 G; 521 T; 0 other;
     cggttgggca atgacaaaat tttatggtgg ctgggataaa ttgatgaaag cattacctga        60
     tggttggtta tattgtcatg ctgatggatc acagtttgat agttcattaa ccccagcctt       120
     attgaacgca gttcttataa tcaggtcatt ttatatggag gattggtggg ttggccaaga       180
     gatgcttgaa aatctttatg ctgaaattgt gtacactcca attcttgctc cggatggaac       240
     aattttcaag aaatttagag gtaacaacag tgggcaaccc tcaacagtgg tggataacac       300
     actaatggtt gtgatctcta tttactatgc gtgcatgaaa attcggttgg aattgcgagg       360
     aaattgagaa taaacttgtc ttctttgcaa atggagatga tctgatactt gcagtcaaag       420
     atgaggatag cggcttactt gataacatgt catcctcttt ttccgaactt ggattaaatt       480
     atgatttttc agaacgtaca cacaaaagag aagatctttg gttcatgtcc caccaagcaa       540
     tactagttga tggaatgtac attccaaaac tcgagaaaga gagaattgtt tcaattctag       600
     agtgggatag aagcaaagaa attatgcacc gaacagaggc gatttgcgct gcaatgattg       660
     aggcatgggg gcacactgag cttttgcaag aaatcagaaa gttttaccta tggttcgttg       720
     aaaaagaaga agtgcgagaa ttggctgccc tcggaaaagc tccatacata gctgagacag       780
     cacttcgtaa gttatatact gacaagggag cggagacaag tgaactggca cgatacctac       840
     aagccctcca ccaagatatc ttctttgaac aaggagacac tgtaatgctc caatcaggca       900
     ctcaaccaac tgtggcagac gctagagtta caaagaaaga taaagaagat gacaaagggg       960
     aaaacaagga tttcacaggc tccggctcag gtgagaaaac agtagtagct gccaagaaag      1020
     acaaggatgt gaatgctggt tctcatggga aaattgtgcc gcgtctttcg aagatcacaa      1080
     agaaaatgtc attgccacgc gtgaaaggga atgtgatact cgatatcgat catttgctgg      1140
     aatataagcc ggatcaaatt gagttataca acacacgagc gtctcatcag caatttgcct      1200
     cttggttcaa ccaagttaag acagaatatg atctgaatga tcaacagatg ggagttgtga      1260
     tgaacggttt catggtttgg tgtattgaaa atggcacctc acctgacatt aatggagtgt      1320
     ggtttatgat ggacggaaat gaacaagttg agtatccttt gaaaccgata gttgaaaatg      1380
     caaagccaac gctgcggcaa ataatgcatc atttttcaga tgcagcggag gcatatatag      1440
     agatgagaaa tgcagaggca ccatacatgc cgaggtatgg tttgcttcga aacctacggg      1500
     ataggagttt agcacgatac gctttcgatt tctatgaagt caattctaaa actcctgaaa      1560
     gagcccgtga agctgttgcg cagatgaaag cagcagctct tagcaatgtt tcttcaaggt      1620
     tgtttggcct tgatggaaat gttgccacca ctagcgaaga cactgaacgg cacactgcac      1680
     gtgatgttaa tagaaacatg cacaccttac taggtgtgaa tacaatgcag taaagggtag      1740
     gccgcctacc taggttatcg cttcgctgcc gacgtaattc taatatttac cgctttattt      1800
     gatatcttta gatttccaga gtgggcctcc cacctttaaa gcgtagagtt tatgttagtt      1860
     gtccaggagt gccgtagtcc tgtcggaagc tttagtgtga gcctctcacg aataagctcg      1920
     agattagact ccgtttgcaa gcct                                             1944
//