ID D13774; SV 1; linear; genomic RNA; STD; VRL; 3224 BP. XX AC D13774; XX DT 13-APR-1994 (Rel. 39, Created) DT 30-MAR-2006 (Rel. 87, Last updated, Version 7) XX DE Rice gall dwarf virus genomic RNA, segment S3, complete sequence, encoding DE 116K major core capsid protein. XX KW . XX OS Rice gall dwarf virus OC Viruses; Riboviria; Reoviridae; Sedoreovirinae; Phytoreovirus. XX RN [1] RP 1-3224 RA Omura T.; RT ; RL Submitted (26-NOV-1992) to the INSDC. RL Toshihiro Omura, National Agricultural Research Center, Laboratory of RL Virology; Kannondai 3-1-1, Tsukuba, Ibaraki 305-8666, Japan RL (E-mail:toomura@affrc.go.jp, Tel:81-29-838-8932, Fax:81-29-838-8929) XX RN [2] RP 1-3224 RX PUBMED; 8113747. RA Takahashi Y., Tomiyama M., Hibino H., Omura T.; RT "Conserved primary structures in core capsid proteins and reassembly of RT core particles and outer capsids between rice gall dwarf and rice dwarf RT phytoreoviruses"; RL J. Gen. Virol. 75:269-275(1994). XX DR MD5; 6557d71cfd6627a2de1c110299f9a5aa. XX FH Key Location/Qualifiers FH FT source 1..3224 FT /organism="Rice gall dwarf virus" FT /segment="S3" FT /mol_type="genomic RNA" FT /clone_lib="pBR322" FT /db_xref="taxon:10986" FT CDS 36..3101 FT /codon_start=1 FT /gene="RGDVS3CP" FT /product="core capsid protein" FT /db_xref="GOA:Q86112" FT /db_xref="InterPro:IPR015312" FT /db_xref="InterPro:IPR016029" FT /db_xref="UniProtKB/Swiss-Prot:Q86112" FT /protein_id="BAA02917.1" FT /translation="MDVTGAPYSSGLNVRNVLLTESTSTFTPIETYNVQDDIRTIRISA FT KIAEESVVSRVPLPVSFKPISEITKLFDIIPISRGSTTSIVEHPQTSFMIKLRDNTFSD FT YACLDHLVAFEPALILHRLKMLFSILGKYASSIISEVPTLDVMIDNAQVTVIDMSKFDD FT RNMNTYADRLPRDIEVYAAKQDILKQYVRTSVNETPITFRDDLPMPVRERPTLYRRYIV FT PFTPVELSLYNMALQMLDLQYCHPLIVYKYLQDRAPPFLVVNDQIGLEMLSAGDGELLP FT RPVMEVLDYSLVYSSPLALNNLGSLLMSRIKTSIKVRSINEVSSSLSEIVNASSTVSNS FT ASSAIANMNVAGVETIAAFIIRSVLNPNISYAMIGKLDLDAFNDFIYGTCLLLLQAITP FT PSAIAAMSRVRINNALAYFLLRYICPQPVYTRLLQNDVIPSLTNTLEWSSVDRDILAAI FT YSNLFVADGRIWNLVSRYYRELPPEEVTQVSVPARETSYGINETRGISLPYLFGDAITE FT MRPDNRLNDYKQRLNLPSRSPILIANPMRNNVVDLTNVNVKMDFIMDLYDQNNFLKSPA FT QWVRNSASNSALLAKFRDSVSNITGILENVLSNAYSNAVNTYCDSVYRAGVPLNWKYRV FT VIDPKDMMFVIFGVCPRYVLMGDSIPDFFAGSEDILILQLVRAIWEVMSNHMGNVPTRF FT FRMEDVQRDLSEMVSIVLSKKIDVTKYFTDDMRSTTFSKEAWERFIARQIGEELPPLYR FT TILDQVETINNYMEQMMSIMPIVDHFYVVRNSGIAARGSVNPILAATTLNLNQINTTMI FT IRDWSELVRLVMTQQRVDLNTSHSLFEAEFYKLSEIASNEFVRSNERGEAEPHFTDVEA FT IRINMYARYELKIYKEQGEFSKPTKLNKVMHEDLTSFVKSNIGKPYPPVFTIPIDIMLN FT DLGECTSTKTRMRSFKVDEYFKCFTGAQVIIPLDYVNLEHVGSIQDLQVMFNGSVSVRI FT KPWTIKENFDVNYVQTGNHEVLIDPLPNVLPI" XX SQ Sequence 3224 BP; 1006 A; 582 C; 701 G; 935 T; 0 other; ggcatttttc cacttggcca tttattccgt agcaaatgga tgtgactggt gcgccatatt 60 caagtggttt gaatgttaga aatgtgctac tgactgaaag cacctctacc ttcactccaa 120 ttgaaacata taatgttcaa gatgatattc gaacaattag aatatcagct aaaattgcag 180 aagaatctgt ggtcagcaga gtaccacttc ccgttagctt taagccaatt agtgaaataa 240 ctaaattatt tgatataatt ccgatatcta gagggtcgac cactagtata gtggagcatc 300 cacagacatc attcatgatt aagctacgtg ataacacttt cagtgattat gcctgtttgg 360 atcatttggt ggcatttgaa ccagcactaa tcctgcatag attgaaaatg ttgttttcaa 420 tattaggtaa atacgcttcg tcaattatat cagaggtccc aaccctcgac gttatgattg 480 ataacgcgca agttacagtt atagatatgt ctaaatttga tgacagaaat atgaatacct 540 atgcggatag gttgcctcgg gatatcgagg tctatgctgc taagcaagac attttgaaac 600 agtacgttag aacatcagtt aatgagacgc caataacatt cagagatgat ttgccaatgc 660 ctgtaagaga gaggccaacg ttgtatcggc ggtatatcgt tccattcact ccagtggaat 720 tatccctata caatatggca cttcagatgc tggatctgca atactgccac cctttgattg 780 tatacaaata ccttcaggac agggctcctc cctttttagt cgtcaacgac caaattgggt 840 tagagatgct cagcgctgga gatggggagt tacttccgcg tcccgtaatg gaagtactcg 900 actattcact agtttattca tcaccattag ctctaaacaa cctcggatcc ttgttgatgt 960 ctaggatcaa gacgtcaatt aaggttagat ctattaacga ggtttcatca tctttgtcag 1020 agatagttaa tgcatcatca actgtttcta actcagcgtc cagcgccatc gctaatatga 1080 acgttgctgg agttgagacg atagcagcat ttataataag gtcagtactt aatcctaata 1140 tatcttatgc aatgatagga aagttggatt tagatgcctt caatgatttt atctatggca 1200 cttgcttgtt gttgttgcag gcgattacac caccgagtgc gatcgcagca atgtcaagag 1260 tacggataaa caatgcctta gcttatttct tgttaagata catttgtcct cagccagttt 1320 ataccaggct attacagaat gatgtaatac catcactaac gaatacactt gaatggagta 1380 gcgttgaccg ggatattctg gcggctatat attcgaattt gttcgttgca gacggcagga 1440 tatggaacct agtaagtagg tattataggg aattaccgcc tgaagaagtg actcaggtat 1500 cagttcctgc gagagaaact tcgtacggca ttaatgaaac caggggaata agtcttccat 1560 acttgtttgg ggacgcgatt acggagatgc ggccggataa cagactaaat gattataagc 1620 aaaggctaaa cttgccgtca agaagcccaa ttttgatagc aaatcctatg agaaacaatg 1680 ttgtagattt gaccaatgtg aacgtcaaaa tggattttat aatggatctt tacgaccaga 1740 ataatttctt gaagtcacca gctcagtggg tgaggaatag cgctagtaat tcagcattgc 1800 tagcaaaatt tagagatagt gttagtaata taacaggaat acttgaaaac gtgttgtcaa 1860 atgcgtattc caacgccgta aacacatact gcgattcggt atacagggcg ggagtaccgt 1920 taaattggaa atacagagta gtgatagacc ccaaagacat gatgtttgtc atatttggag 1980 tgtgtccacg ttacgttctt atgggagatt caatacctga cttttttgct ggaagtgagg 2040 atattctaat tctgcaactg gttagagcca tttgggaagt tatgtctaac cacatgggga 2100 atgtaccaac aagattcttc aggatggaag atgttcaaag agacttgagt gaaatggtgt 2160 caattgttct gtcgaagaag atagacgtta ctaaatactt cacagatgat atgaggtcaa 2220 ctacattctc taaggaggcg tgggagcgtt tcatcgcaag gcaaattggt gaagagttac 2280 cacctctata tagaacgatt ttggatcagg tagaaaccat taataactac atggaacaaa 2340 tgatgtctat tatgcctatc gttgatcatt tttatgttgt tcgaaatagt ggtatagctg 2400 ctcgtggatc tgttaacccc attttagcgg ctactactct aaacttgaat cagataaaca 2460 cgactatgat catacgggac tggtcagagt tagtaagatt ggtgatgacg caacaacgag 2520 tagatttaaa tacatcacat agcttatttg aggctgagtt ctacaagctg agcgagatag 2580 cgtcaaatga gttcgtaagg tctaatgagc gtggagaagc tgagccgcat ttcactgatg 2640 tggaagcgat aagaattaat atgtatgcga gatatgaatt aaaaatatat aaagaacaag 2700 gagagttctc caaaccaact aaattaaaca aagtaatgca tgaggattta acttcatttg 2760 taaaatctaa cataggtaag ccatatccac ccgtgtttac cataccaatt gacatcatgc 2820 taaatgattt gggtgaatgc acttcgacaa aaacgagaat gcgatcattt aaagtagatg 2880 aatactttaa atgctttaca ggagcgcaag tcataatacc tttggattat gtgaatctgg 2940 agcatgtggg atccattcaa gacttacaag taatgttcaa tggaagtgtt tccgtacgaa 3000 tcaagccttg gacaattaag gagaatttcg atgttaatta cgttcaaacg ggtaaccacg 3060 aggtgctaat tgacccgtta ccaaacgtac tgcccatata aaatactaac acatctactt 3120 gagtgtggtt gctaagaaca tccaatgcgt gccttgtccg gggaggggca atcgtgacct 3180 attattcgcg aataataggg ttggccaatg ctggaaaagt tgat 3224 //