ID   D13404; SV 1; linear; genomic RNA; STD; VRL; 1305 BP.
XX
AC   D13404;
XX
DT   16-OCT-1992 (Rel. 33, Created)
DT   05-OCT-2007 (Rel. 93, Last updated, Version 9)
XX
DE   Rice dwarf virus genomic RNA, segment 9, complete sequence.
XX
KW   .
XX
OS   Rice dwarf virus
OC   Viruses; Riboviria; Reoviridae; Sedoreovirinae; Phytoreovirus.
XX
RN   [1]
RP   1-1305
RA   Fukumoto F., Omura T., Minobe Y.;
RT   ;
RL   Submitted (12-OCT-1992) to the INSDC.
RL   Fumiyoshi Fukumoto, National Research Institute of Vegetables, Ornamental
RL   Plants and Tea; 360 Kusawa, Ano, Age, Mie 514-23, Japan
RL   (Tel:81-5926-8-1331, Fax:81-5926-8-1339)
XX
RN   [2]
RP   1-1305
RX   DOI; 10.1007/BF01313885.
RX   PUBMED; 2803000.
RA   Fukumoto F., Omura T., Minobe Y.;
RT   "Nucleotide sequence of segment S9 of the rice dwarf virus genome";
RL   Arch. Virol. 107(1-2):135-139(1989).
XX
DR   MD5; 3c9621dac1c135cee40502726d9f324a.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1305
FT                   /organism="Rice dwarf virus"
FT                   /segment="9"
FT                   /mol_type="genomic RNA"
FT                   /clone_lib="pBR322"
FT                   /db_xref="taxon:10991"
FT   repeat_region   2..15
FT                   /rpt_type=INVERTED
FT                   /note="terminal sequence"
FT   CDS             25..1080
FT                   /codon_start=1
FT                   /product="38.9K polypeptide"
FT                   /note="putative nonstructural protein"
FT                   /db_xref="GOA:Q85446"
FT                   /db_xref="InterPro:IPR008776"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q85446"
FT                   /protein_id="BAA02668.1"
FT                   /translation="MGKLQDGIAIKRINDAITTFKNYKLDELEQGGSMAINTLSNVRAH
FT                   VGLAWPAILRNCLIHTSSHLGFMKFMIDIATTWKVGAFTLLGSVGDEDPFTDVDLIYTK
FT                   TCLHLGLKDNDFLQFPEEFAYEANSFLEAQSMNARVDMLTGVHNIEDKYVFRMQSISKF
FT                   LKAYYTASEDVAYLTGFIKPDDSKDSILSAELLKAQVTSEVLRVRNLITTKIQKYINLY
FT                   EDSQLPHFRQAALSYTQDWDVDGGVPAALPQPDITDDESPVTNPGPSAPPVSKGADQPE
FT                   DEEMIRKKVETSKDAPPKAVPSGNVSARGIPAFLEDDMSEMDAPDGFHDYLTREHENNF
FT                   DLAQLGLAPSV"
FT   repeat_region   1289..1302
FT                   /rpt_type=INVERTED
FT                   /note="terminal sequence"
XX
SQ   Sequence 1305 BP; 336 A; 279 C; 323 G; 367 T; 0 other;
     ggtaaaaatc gtgtgtcctc cgtgatgggt aagctccaag atggaatcgc catcaagcgg        60
     atcaacgacg cgattaccac tttcaaaaat tacaagcttg atgaactgga acagggcggc       120
     tcaatggcca tcaacacatt gagtaacgtc cgtgcccatg ttgggctggc ttggccggcc       180
     atcttgcgaa attgtttaat acacacttca tcccatcttg ggttcatgaa gtttatgatt       240
     gatattgcta ctacctggaa agttggtgct ttcactcttc tgggtagcgt tggtgacgaa       300
     gatcccttca ctgacgttga tttgatttat actaagacct gcttacattt gggtcttaag       360
     gacaatgatt ttctgcaatt cccagaggaa tttgcttatg aggcgaattc gtttttagaa       420
     gcgcagtcga tgaatgctag ggtggacatg ctcactggtg tccacaatat tgaagacaaa       480
     tacgttttca ggatgcagtc tatatctaag tttttgaagg cttactatac tgcttcagaa       540
     gatgttgctt atctgaccgg attcataaag cctgacgact ccaaggactc aatcttgagt       600
     gccgaactct tgaaagcgca ggttacatcc gaggtgctac gtgtgcgtaa tttgattacc       660
     accaagattc agaagtacat taatttgtac gaagattcac agttaccgca ttttcggcag       720
     gcggctttgt cctacactca ggattgggat gttgatggcg gtgtgcccgc tgcacttcca       780
     cagcctgata taactgatga cgaaagtccc gtcactaacc ctggccctag cgcaccacca       840
     gtgagtaaag gtgctgatca gccagaagac gaggagatga tacgtaaaaa ggtagagact       900
     tcgaaagatg ctccacctaa ggcagttcct tctggaaatg taagcgccag aggcattcct       960
     gcctttttag aagatgatat gagtgaaatg gatgcgcctg atggcttcca tgattacttg      1020
     acgagggagc atgagaacaa cttcgacttg gcgcagttgg ggctcgcacc ctcagtttga      1080
     ctttatgctg gagtagacga atgcctcacc aacatttgtc actccataat ggtgttatcg      1140
     tgtctgcatg gattcttcag aatgttgatt cgtgtactag gttgcttgta aacaacggag      1200
     tggtggtcgt tagatccgtc tggcgtggaa gttttgaaag cgaacctgtg tcctaacgcg      1260
     gatgcgggag agtcatttac ttccatgtca cacgatttat acgat                      1305
//