ID D12538; SV 1; linear; genomic RNA; STD; VRL; 3051 BP. XX AC D12538; D01200; XX DT 14-JUL-1992 (Rel. 32, Created) DT 07-JUL-2003 (Rel. 76, Last updated, Version 7) XX DE Cucumber mosaic virus segment RNA2, complete sequence. XX KW . XX OS Cucumber mosaic virus (cucumber mosaic cucumovirus) OC Viruses; Riboviria; Bromoviridae; Cucumovirus. XX RN [1] RP 1-3051 RA Takanami Y.; RT ; RL Submitted (04-OCT-1991) to the INSDC. RL Yoichi Takanami, Kyushu University, Deapertment of Agriculture; 6-10-1 RL Hakozaki, Higashi-ku, Fukuoka 812, Japan (Tel:81-92-641-1101(ex.6165), RL Fax:81-92-641-2928) XX RN [2] RP 1-3051 RA Kataoka J., Masuta C., Takanami Y.; RT "Complete nucleotide sequence of RNA2 of cucumber mosaic virus Y strain"; RL Nippon Shokubutsu Byori Gakkaiho 56:495-500(1990). XX DR MD5; 407c729ed2d223f176c0936cedf88a8b. DR EuropePMC; PMC136033; 11884564. DR EuropePMC; PMC2268452; 18216118. DR EuropePMC; PMC5393175; 28148824. DR RFAM; RF01084; TLS-PK3. XX FH Key Location/Qualifiers FH FT source 1..3051 FT /organism="Cucumber mosaic virus" FT /segment="RNA2." FT /strain="Y" FT /mol_type="genomic RNA" FT /note="clones pBCY[21,22,23] and pCY2[N5,C15]" FT /db_xref="taxon:12305" FT CDS 88..2661 FT /codon_start=1 FT /product="2a protein" FT /note="Polymerase site (GDD and TGxxxTxxxNT consensus FT sequence were found. It suggests that the protein would be FT involved in virus RNA replication." FT /db_xref="GOA:Q83265" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/Swiss-Prot:Q83265" FT /protein_id="BAA02106.1" FT /translation="MAFPAPAFSLANLLNGSYGVDTPEDVERLRSEQREEAAAACRNYR FT PLPAVDVSESVTEDAHSLRTPDGAPAEAVSDEFVTYGAEDYLEKSDDELLVAFETMVKP FT MRIGQLWCPAFNKCSFISSIAMARALLLAPRTSHRTMKCFEDLVAAIYTKSDFYYSEEC FT EADDAQIDISSRDVPGYSFEPWSRTSGFEPPPICEACDMIMYQCPCFDFNALKKSCAER FT TFADDYVIEGLDGVVDNATLLSNLGPFLVPVKCQYEKCPTPTIAIPPDLNRATDRVDIN FT LVQSICDSTLPTHSNYDDSFHQVFVESADYSIDLDHVRLRQSDLIAKIPDSGHMIPVLN FT TGSGHKRVGTTKEVLTAIKKRNADVPELGDSVNLSRLSKAVAERFFISYINGNSLASSN FT FVNVVSNFHDYMEKWKSSGLSYDDLPDLHAENLQFYDHMIKSDVKPVVSDTLNIDRPVP FT ATITYHKKSITSQFSPLFTALFERFQRCLRERIILPVGKISSLEMAGFDVKNKHCLEID FT LSKFDKSQGEFHLLIQEHILNGLGCPAPITKWWCDFHRFSYIRDRRAGVGMPISFQRRT FT GDAFTYFGNTIVTMAEFAWCYDTDQFEKLLFSGDDSLGFSLLPPVGDPSKFTTLFNMEA FT KVMEPAVPYICSKFLLSDEFGNTFSVPDPLREVQRLGTKKIPYSDNDEFLFAHFMSFVD FT RLKFLDRMSQSCIDQLSIFFELKYKKSGEEAALMLGAFKKYTANFQSYKELYYSDRRQC FT ELINSFCSTEFRVERVNSNKQRKKYGIERRCNDKRRTPTGSYGGGEEAETKVSQTESTG FT TRSQKSQRESAFKSQTVPLPTVLSSRWFGTDRVMPPCERGGVTRA" XX SQ Sequence 3051 BP; 777 A; 687 C; 701 G; 886 T; 0 other; gtttatttac aagagcgtac ggttcaaccc ctgcctcccc tgtaaaactc cctagacttg 60 aaacttcttc tttctagtat cttttctatg gctttccccg cccccgcatt ctcactagcc 120 aatcttttga acggcagtta cggtgtcgac actcccgagg atgtggaacg tttgcgatct 180 gagcaacgcg aagaggctgc tgcggcttgt cgtaattaca ggcccctacc cgctgtggat 240 gtcagcgaga gtgtcacaga ggacgcgcat tccctccgaa ctcctgacgg agctcccgct 300 gaagcggtgt ctgatgagtt tgtaacttat ggtgctgaag attaccttga aaaatctgat 360 gatgagctcc ttgtcgcttt tgagacgatg gtcaaaccca tgcgtatcgg acaactatgg 420 tgccctgcgt ttaataaatg ttcttttatt tccagcattg ctatggccag agctttgttg 480 ttggcaccta gaacatccca ccgaaccatg aagtgttttg aagacctggt cgcggctatt 540 tacactaaat ctgatttcta ttacagtgaa gagtgtgaag ccgacgacgc tcagatagat 600 atctcgtctc gcgatgtacc cggttattct ttcgaaccgt ggtcccgaac gtctggattt 660 gaaccgccgc ccatttgtga agcgtgcgac atgatcatgt accagtgccc gtgttttgat 720 ttcaatgctt taaagaaatc gtgcgctgag aggactttcg ctgatgatta tgttattgaa 780 ggtttagatg gtgttgttga taatgcgact ctgttgtcga atttaggtcc atttttggta 840 cctgtgaaat gtcaatatga aaaatgtcca acaccaacca tcgcgattcc tccggattta 900 aatcgtgcta ctgatcgtgt tgatatcaat ttagttcaat ccatttgtga ctcgactctg 960 cccactcata gtaattacga cgactctttt catcaagtgt tcgtcgaaag tgcagactac 1020 tctatagatc tggatcatgt tagacttcga cagtctgatc ttatcgcaaa aattccagat 1080 tcagggcata tgataccggt tctgaacacc gggagcggtc acaagagagt aggtacaacg 1140 aaggaggtcc ttacagcaat taagaaacgt aatgctgacg ttccagagct aggtgattcc 1200 gttaatctgt ctagattgag taaagctgtg gctgagagat tctttatttc atacatcaat 1260 ggtaactctc tagcatccag taactttgtc aatgtcgtta gtaatttcca cgattacatg 1320 gaaaagtgga agtcctcagg tctttcttat gatgatcttc cggatcttca tgctgagaat 1380 ttgcagtttt atgaccacat gataaaatcc gatgtgaaac ctgtggtgag cgacacactc 1440 aatatcgaca gaccggttcc agctactata acgtatcata agaagagtat aacctcccag 1500 ttctcaccgt tattcacagc gctattcgag cgcttccaga gatgccttcg agaacgcatt 1560 attcttcctg ttggtaagat ttcatccctt gagatggcag gatttgatgt caaaaacaaa 1620 cactgcctcg agattgattt gtctaagttt gataagtctc aaggtgaatt tcacttgcta 1680 atccaggaac acattttgaa tggtctagga tgtccagctc cgataactaa gtggtggtgt 1740 gatttccacc gattctctta catcagagac cgtagagctg gtgttggtat gcctattagt 1800 ttccagagac gaactggtga tgcattcact tattttggca ataccattgt caccatggct 1860 gagtttgcct ggtgttatga caccgaccaa ttcgaaaagc ttttattctc aggcgatgat 1920 tctctaggat tttcactgct tccccctgtt ggtgacccga gtaaattcac aactcttttc 1980 aacatggaag ccaaggtgat ggaacctgca gtaccatata tttgttcgaa gttcttactc 2040 tctgacgagt tcggtaacac attttccgtt ccagatccat tgcgcgaggt tcagcggtta 2100 ggaacaaaga aaattcccta ttctgacaat gatgaattct tgtttgctca cttcatgagc 2160 tttgttgatc gattgaagtt tttggaccga atgtctcagt cgtgtatcga tcaactttcg 2220 attttcttcg aattgaaata caagaagtct ggggaagagg ctgctttaat gctaggcgcc 2280 tttaagaagt ataccgctaa tttccagtcc tacaaagaac tctattattc agatcgtcgt 2340 cagtgcgaat tgatcaattc gttttgtagt acagagttca gggttgagcg tgtaaattcc 2400 aataaacagc gaaagaaata tggaattgaa cgtaggtgca atgacaaacg tcgaactcca 2460 actggctcgt atggtggagg cgaagaagca gagacgaagg tctcacaaac agaatcgacg 2520 ggaacgaggt cacaaaagtc ccagcgagag agcgcgttca aatctcagac tgttccgctt 2580 cctaccgttc tatcaagtag atggttcgga actgacaggg tcatgccgcc atgcgaacgt 2640 ggcggagtca cccgagcctg aggcctctcg tttagagtta tcggcggaag accatgattt 2700 tgacgataca gattggttcg ccggtaacga atgggcggaa ggtgctttct gaaacctccc 2760 cttccgcatc tccctccggt tttctgtggc gggagctgag ttggcagtat tgctataaac 2820 tttctgaagt cactaaacac attgtggtga acgggttgtc catccagctt acggctaaaa 2880 tggtcagtcg tagagaaatc tacgccagca gacttacaag tctctgaggc acctttgaaa 2940 ccatctccta ggtttcttcg gaaggacttc ggtccgtgta cttctagcac aacgtgctag 3000 tttcagggta cgggtgcccc ccactttcgt ggggcctcca aaaggagacc a 3051 //