ID D11118; SV 1; linear; genomic RNA; STD; VRL; 3360 BP. XX AC D11118; XX DT 15-JUL-1992 (Rel. 32, Created) DT 01-FEB-2007 (Rel. 90, Last updated, Version 21) XX DE Leek yellow stripe virus gene for polyprotein precursor, partial cds. XX KW . XX OS Leek yellow stripe virus OC Viruses; Riboviria; Potyviridae; Potyvirus. XX RN [1] RP 1-3360 RA Sumi S.; RT ; RL Submitted (11-MAY-1992) to the INSDC. RL Shin-ichiro Sumi, Wakunaga Pharmaceutical Co., Ltd, Institute for RL Biotechnology Research; 1624 Shimokotachi, Koda-Cho, Takata-Gun, Hiroshima RL 739-11, Japan (E-mail:sumi_s@wakunaga.co.jp, Tel:81-826-45-2331, RL Fax:81-826-45-4351) XX RN [2] RX DOI; 10.1094/Phyto-86-253. RX AGRICOLA; IND20576986. RA Tsuneyoshi T., Sumi S.; RT "Differentiation among garlic viruses in mixed infections based on RT-PCR RT procedures and direct tissue blotting immunoassays"; RL Phytopathology 86(3):253-259(1996). XX DR MD5; 6ff29af6bda85b079b7985f5ec8c4063. XX FH Key Location/Qualifiers FH FT source 1..3360 FT /organism="Leek yellow stripe virus" FT /mol_type="genomic RNA" FT /note="3' portion of GPV genome." FT /note="synonym: Leek yellow strip potyvirus" FT /db_xref="taxon:42004" FT CDS <1..2761 FT /codon_start=2 FT /product="polyprotein precursor" FT /db_xref="GOA:Q67674" FT /db_xref="InterPro:IPR001205" FT /db_xref="InterPro:IPR001592" FT /db_xref="InterPro:IPR001730" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR009003" FT /db_xref="UniProtKB/TrEMBL:Q67674" FT /protein_id="BAA01892.1" FT /translation="SATSATAGTANKNFFKHWISTKHGQCGNPLVSVTDGSIVGIHSMA FT STVSSMNMYAGFPENFVEDYLSNDMLEWTKGRKLNADRSCWDGITLVNSKAEGLFKMAK FT DIFTLDDGNWEFQSGNKNWMYDKLERNLKAVGRTRGNLVTKHSVKGKCMLFQTYLSVEP FT GEAEYFTPLMGAYTKSALNKEAYIKDLSKYSGEISVGNVNCDIFERAFGKVVALMESKG FT FHKCAYVTNEQDILSSLNMKAAVGALYSGKKREYFADFSDQDKYDIVRESCKRLFLGKM FT GVWNGSLKAELRPIEKVMANKTRSFTAAPLDTLLGGKVCVDDFNNQFYSRHFDLPWTVG FT MSKFRKGWDTLLRKLPENWIYCDADGSQFDSSLSPYLINADLKLRLHFMEDWDVGETML FT KNLYTEIVYTPIATPDGTIVKKFKGNNSGQPSTVVDNSLMVVFAMYYAMEMSNVNNIHD FT KCVFFVNGDDLIIAVEPGSETFLDSLQNLFHQLGLNYNFDNRTRNKEELCFMSHMGILQ FT EDIYIPKLDKERIVSILEWDRAQQPEHRLEALCAAMIEAWGYPELLDRIRKFYYWVLEQ FT APYNELSTLGKAPFISEAALRNLYTDCEATEAELARYLELYDSDAPVEDTFVFQANDEL FT DAGMQTSKKQKDGNDKSIEQRDPASSQVSSLGKKDGEGGSGMSRNKDRDVNVGTTGTFS FT VPRIKQIPQKGISIPMDGGKSILNLDHLLQYKPNQLNISNTRATVAQFKTWMERVQEDY FT GVTKGEMGIILNGLMVWCIENGTSPNINGTWTMMDGDEQVAYPLRPIVEHAKPTLRQIK FT AHFSALAEAYIEMRNSEQAYMPRYGLQRNLTDMGLARYAFDFYEVTSRTPVRAREAHAQ FT MKAAALRNSRPRLFGLDGNVTTTDEDTERHTAHVVNARMHHLDGAHMQ" FT mat_peptide <1..352 FT /product="protease" FT mat_peptide 353..1891 FT /product="RNA polymerase" FT mat_peptide 1892..2758 FT /product="coat protein" XX SQ Sequence 3360 BP; 1065 A; 628 C; 807 G; 860 T; 0 other; gtcagccacg agtgcaacag caggaacggc caataaaaat ttcttcaaac attggatatc 60 cacgaagcat gggcagtgtg ggaatccttt agtgtccgtg acagatggta gtattgttgg 120 aatacatagc atggctagta cagttagttc gatgaacatg tacgctggtt ttccagaaaa 180 ctttgtggaa gattatctaa gcaatgatat gctagagtgg acaaaaggac ggaaactcaa 240 tgcagacagg agctgttggg atggtatcac actggtgaat agcaaagcgg agggtctatt 300 taagatggcc aaagatatat tcaccctcga tgacggcaac tgggaatttc aatcaggcaa 360 caagaattgg atgtatgata aactagaaag aaatttaaaa gccgtgggtc gcactagggg 420 aaatttagta acaaagcatt cagtgaaagg aaagtgtatg ctatttcaaa cttacctctc 480 agtcgagcca ggagaagctg agtatttcac accactcatg ggcgcctaca caaagagcgc 540 tctcaacaag gaagcatata ttaaagactt gagtaagtat tcgggtgaaa taagtgttgg 600 aaatgtgaac tgtgacatct ttgaacgggc atttggaaaa gttgtggctc taatggagag 660 caagggcttc cataagtgcg catatgttac aaatgagcag gatatattat catcattgaa 720 catgaaagcg gctgttggag cgctgtattc aggtaagaag cgtgagtact ttgcagattt 780 ttctgaccaa gataagtatg atattgtcag agaaagctgt aaaagattgt tccttgggaa 840 aatgggagtg tggaatggat ctctaaaagc tgaacttcga ccaattgaaa aggttatggc 900 aaataaaaca cgttcgttta cagcagcacc cttagatacg ctccttggtg gaaaggtatg 960 cgtcgacgat ttcaataatc aattctatag tcgtcacttt gatctgcctt ggacagttgg 1020 catgagtaaa tttcgtaaag gatgggatac tttgctgagg aagctaccag agaactggat 1080 ttattgcgat gcagacggct cccaatttga cagctcattg tcaccatatt taataaacgc 1140 cgacttaaaa cttcgattac atttcatgga ggattgggat gttggggaaa ctatgctcaa 1200 gaatttatac acggagattg tgtacacacc aatagcaaca ccagatggaa cgatagtaaa 1260 gaaatttaag ggtaacaaca gcggccaacc atccacagtt gttgacaatt cattaatggt 1320 cgtctttgca atgtactatg caatggaaat gagcaacgtt aataacatcc acgataaatg 1380 tgttttcttc gtgaacggtg atgatttaat tatagcagtt gaaccaggct ctgaaacatt 1440 ccttgatagt ttgcaaaatc tctttcatca acttggctta aattacaact ttgacaatcg 1500 aacgcgcaat aaggaagagc tgtgtttcat gtcacacatg ggtattttac aagaagacat 1560 atatatacca aaactggata aggagcgcat agtgtcgata ttggagtggg atcgcgctca 1620 gcagcctgag catagattgg aagctctatg cgcagccatg atcgaagctt ggggatatcc 1680 ggaattgcta gatcgaatcc gaaagttcta ttattgggtt cttgaacaag caccgtataa 1740 tgagttgagt acattaggta aagcgccatt tatctctgaa gcagccctgc ggaatttata 1800 cactgattgt gaggcaacgg aagcggagtt agcacgatac ctcgaacttt acgacagcga 1860 tgcacccgta gaagacacat ttgtgttcca agctaatgat gaattagatg caggcatgca 1920 aacaagtaag aaacagaagg atggtaatga taaatctatt gaacaacgcg atccagcatc 1980 atcacaagtt agttcattag gcaagaaaga cggtgaaggc ggttcaggaa tgagtagaaa 2040 caaagacagg gatgtgaacg ttggcacaac agggactttt agtgttccac gaatcaaaca 2100 gataccacag aaaggcatct cgataccaat ggacggagga aagtcaatac tcaacttaga 2160 tcacttacta cagtataaac caaatcaatt gaatatatcg aacacaagag ccacggtggc 2220 acaatttaaa acctggatgg agagagtgca agaggattac ggtgtcacta aaggtgaaat 2280 gggcataatt ctgaatggtt tgatggtgtg gtgcatcgaa aatggaacct caccaaatat 2340 aaatgggact tggactatga tggatggcga tgagcaagtc gcgtaccctt tacggccgat 2400 cgttgaacat gcaaaaccaa ccttacggca aataaaggcg catttttcag cactcgcgga 2460 ggcgtacatt gaaatgagaa attcagagca ggcttatatg ccaagatatg gactacaaag 2520 aaatcttaca gacatgggcc tcgcacggta tgcatttgat ttttatgaag tcacatcaag 2580 aacaccagtt agagcgcgcg aggctcacgc acaaatgaaa gcagcggccc tacgtaattc 2640 aaggccaagg ctgtttggac tagacggtaa cgtcacaacc acggatgagg acacggagag 2700 gcacacagca catgtcgtga atgcacggat gcaccatctt gatggtgcgc atatgcagtg 2760 atgtttcggt tagtaaccgg ttatgggctt ccatttaaaa agtcccgagt gccgaacttg 2820 tatttcggct agtgtagtga aactatgatt cactcgttca aggcagtttc tactttaagg 2880 atgacttggg aattagtagc tcccaatgcc agtcacgatg gtgactacca agagtcaaca 2940 cttggtttga ggttgatcgt ccgaagatct atccggagta cggttttgta aagaaggtga 3000 attcaattgt taaggatcgt aagtctgaag cctttatggc gtataagcag cctgaattct 3060 gataccccac ctttacccta caatggaatg ctactttaga gactagctag gattgagacc 3120 gaaatctcac atactggcat ggccagtagt tgatcactta atgatcaggt gaccactcta 3180 cagtcaaact ggaacccgta gtatcctatc cttacctaat atcgtaagtt ttatttactg 3240 gtgtagcgtg gttcaaccac cttataaaca ctttgaatat taggatcgag ctgttcgtct 3300 gaaggcacta agagtggctt gaccatgtgt gcgttcttac gttgcagtaa gaggaactcc 3360 //