ID D10172; SV 1; linear; genomic RNA; STD; VRL; 2392 BP. XX AC D10172; XX DT 27-SEP-1994 (Rel. 41, Created) DT 07-DEC-2007 (Rel. 94, Last updated, Version 4) XX DE Potato virus T genomic RNA, 3'-terminal region. XX KW 40KD protein; coat protein; replicase. XX OS Potato virus T OC Viruses; Riboviria; Tymovirales; Betaflexiviridae; Trivirinae; Tepovirus. XX RN [1] RP 1-2392 RA Ochi M., Kashiwazaki S., Hiratsuka K., Namba S., Tsuchizaki T.; RT "Nucleotide sequence of the 3'-terminal region of Potato virus T RNA"; RL Nippon Shokubutsu Byori Gakkaiho 58:416-425(1992). XX DR MD5; f6287144dc1e5db7cf464b27dea272e9. XX CC These data kindly submitted in computer readable form by: CC Shigetou Namba CC Laboratory of Plant Pathology CC Faculty of Agriculture CC University of Tokyo CC 1-1-1 Yayoi, Bunkyo-ku CC Tokyo 113 CC Japan XX FH Key Location/Qualifiers FH FT source 1..2392 FT /organism="Potato virus T" FT /mol_type="genomic RNA" FT /db_xref="taxon:36403" FT CDS <1..747 FT /codon_start=1 FT /product="replicase" FT /db_xref="GOA:Q85214" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:Q85214" FT /protein_id="BAA01042.1" FT /translation="VDQEEGTESDYEAFDRSQDAIILGLEIECLKLFGWDQDLIDDYRK FT LKLWMGCRLGAIAIMRFTGEFGTFFFNTIANIAFTCLRYNITRDTVIAFAGDDMYASGK FT LEIRKDREDLLAHLTLKAKVQFTEKPMFCGWYIKKMGIVKEPRLVLERWLIAERKKVID FT QCFINYSIEVSYGYRLGEYLWEYFDNLEDFQAIVRLVIKKKKQLPPAIRRIFETSNGVD FT FSGEVQETMGGEGEHHGSCGLWCNLH" FT CDS 656..1732 FT /codon_start=1 FT /product="40KD protein" FT /db_xref="InterPro:IPR028919" FT /db_xref="UniProtKB/TrEMBL:Q85215" FT /protein_id="BAA01043.1" FT /translation="MELISVEKFRRQWEERESITGPVDSGAIYTNSAFHNLKTKWHVYK FT SECSIGLDLPDNGKIISKDIPLFDQEEIDNIMKDDKQVFVHLGAFVFGLVAHFPVDEEV FT EGLVSIIDKRRTDLRRATLACRKIKFVNGRCAFMMKPNFSVRKEDLRDGDTFCAAIKIK FT NLGFEGGFFPFSACGGVIYRTSNVSFAHAVDKTFASRTVHDLVGTDILSLDQLDQATLE FT DLEEVRRSPILRLTAPDERVMIERGNWFQKKPAIRRRSFGKRRPQKSSSVRSASLPRFS FT CSERLERGFESESLAGLVLDQKYGPNNFCADKRRSPESDSGSLQQSMGRSSHSGSEGWG FT KGTDVAIPLRKNRNIFSE" FT CDS 1566..2207 FT /codon_start=1 FT /product="coat protein" FT /db_xref="GOA:Q85216" FT /db_xref="InterPro:IPR008879" FT /db_xref="UniProtKB/TrEMBL:Q85216" FT /protein_id="BAA01044.1" FT /translation="MDPTTFVQIRDEVLNLTVAAYSSQWDGQATQALKDGAKEQMLRFL FT FGRIAISSASRNTIWPDTEIASEDLQIGMSAASAGPPPVAAAPISLTFRVNFNSYVKML FT IALSNTSTNSFVKNKTLRQMCMPFAKYAYGYLSEMGYATWAYEKMPKLCRKAKWVAFDF FT ASGLLIDTTMQLNDDEKTVIQGLGARLFKTQQSIQIADSTMDGEAINREI" FT polyA_site 2392 XX SQ Sequence 2392 BP; 725 A; 414 C; 603 G; 650 T; 0 other; gttgatcaag aagagggcac tgaatctgat tatgaagctt tcgatagatc acaggatgca 60 atcattctag gtcttgaaat agaatgtctg aaattgtttg gatgggatca agacctgatc 120 gatgattaca gaaagctgaa actttggatg ggatgtaggt tgggggcaat tgcaattatg 180 agattcacag gtgaatttgg aacattcttt ttcaacacaa ttgcaaacat cgcattcaca 240 tgtttgaggt ataatatcac cagagacact gtgattgcgt ttgcaggaga tgacatgtat 300 gcatccggaa aactcgaaat caggaaagat agagaagacc tgctggccca tctaacttta 360 aaggcaaaag tacagttcac agaaaagcca atgttctgtg ggtggtacat caagaagatg 420 ggaattgtga aggagccaag attggtactt gagaggtggt tgatagctga aagaaagaag 480 gtgatagatc aatgcttcat caactactca atcgaggtat cttatggata cagattaggt 540 gagtacctct gggagtattt tgataattta gaggatttcc aagcaatagt gagattggtg 600 ataaagaaga agaagcaact gccaccagct ataagaagga tttttgaaac aagcaatgga 660 gttgatttca gtggagaagt tcaggagaca atgggaggag agggagagca tcacgggtcc 720 tgtggactct ggtgcaatct acactaactc cgcgtttcac aatctgaaga ccaaatggca 780 cgtttacaag tctgagtgca gtattggtct tgatttgccc gataacggaa aaataatatc 840 aaaggacatc cccctctttg atcaagagga gattgataac atcatgaaag acgataaaca 900 ggtattcgtc catctgggag cctttgtgtt cggacttgtt gcacactttc ctgtcgatga 960 ggaagtggaa ggattagtct ctatcattga caaacgtcgg actgatctaa ggagggcaac 1020 cctagcttgc aggaaaatta aatttgtgaa tggaagatgc gctttcatga tgaaaccaaa 1080 cttttcagtc aggaaggagg atttaaggga tggtgacact ttttgtgccg ctatcaaaat 1140 caaaaacctt ggctttgaag gtgggttctt tccattttca gcatgtggcg gagtgattta 1200 cagaacctca aatgtgagtt ttgcacatgc tgttgacaaa acctttgctt ctaggactgt 1260 tcatgatttg gtgggtactg atatactctc tttggatcaa ctggaccaag ccactctgga 1320 ggaccttgag gaagtgagaa ggagccccat tctaaggtta accgctcctg atgagagagt 1380 aatgatagaa agagggaatt ggttccagaa gaaaccggca ataaggagga gaagttttgg 1440 gaaaaggaga ccccaaaaaa gttcgtcagt taggtcggcg agtttgcctc gattttcatg 1500 ttctgagagg ttagaaaggg gctttgaatc agagagtctg gctggattag tgctagatca 1560 gaaatatgga cccaacaact tttgtgcaga taagagacga agtcctgaat ctgacagtgg 1620 cagcttacag cagtcaatgg gacggtcaag ccactcaggc tctgaaggat ggggcaaagg 1680 aacagatgtt gcgattcctc ttcggaagaa tcgcaatatc ttcagcgagt agaaacacca 1740 tctggcctga cacggagatc gcgtcggagg atctccagat aggtatgtca gcggcttcag 1800 cgggtccacc tccagtggct gctgctccga taagccttac atttagggta aattttaatt 1860 cttatgtcaa aatgctaata gctttgtcca acacttcaac aaattccttt gtaaagaata 1920 aaacactcag acaaatgtgt atgccttttg caaaatatgc ttatggatac ttatctgaaa 1980 tgggctatgc aacttgggca tatgagaaaa tgcccaaact ttgtcgaaag gctaaatggg 2040 ttgctttcga ttttgcatct gggttgttga ttgatacaac aatgcagttg aatgatgatg 2100 aaaagaccgt cattcaaggt ctgggagcta ggttattcaa aactcaacag tccattcaaa 2160 ttgctgattc cacaatggac ggtgaagcta tcaatcgtga aatttgactg agaaagagga 2220 gaagagttgg tcgtttgtta aatccggcat aattggtcgc ggtcttgagg gttgactggc 2280 cctcatttga ataaatttaa aatctgcata attgatcgca gtctagggag ttgatatgct 2340 ccccccgatg ttcttaatct agggtttgca tggtttttca agtttttaaa gc 2392 //