ID   D01030; SV 1; circular; genomic DNA; STD; VRL; 2672 BP.
XX
AC   D01030;
XX
DT   07-DEC-1991 (Rel. 30, Created)
DT   18-DEC-2007 (Rel. 94, Last updated, Version 6)
XX
DE   Miscanthus streak virus - [91] DNA, complete genome.
XX
KW   .
XX
OS   Miscanthus streak virus - [91]
OC   Viruses; Geminiviridae; Mastrevirus.
XX
RN   [1]
RP   1-2672
RA   Chatani M., Matsumoto Y., Mizuta H., Ikegami M., Boulton M.I., Davies J.W.;
RT   "The nucleotide sequence and genome structure of Geminivirus Miscanthus
RT   streak virus";
RL   Unpublished.
XX
DR   MD5; 1e037564ee9c571cfff6cb9f3a56cff0.
XX
CC   Data kindly submitted in computer readable form by:
CC   Masaaki Chatani
CC   John Innes Institute
CC   Colney Lane
CC   Norwich NR4 7UH.
CC   U.K.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2672
FT                   /organism="Miscanthus streak virus - [91]"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:268776"
FT   CDS             join(2357..2672,1..89)
FT                   /codon_start=1
FT                   /note="ORF V0"
FT                   /db_xref="GOA:Q67592"
FT                   /db_xref="UniProtKB/TrEMBL:Q67592"
FT                   /protein_id="BAA00836.1"
FT                   /translation="MGCVFIMGRRGSETNNITAPPPWPISRPLASVRCAFGPRSLPPLA
FT                   EDRTQAAVKWHRHLSVFALVPLVCGFKKRRRLRDRTKTKGTQVACLRTWVIKFCFVCKF
FT                   LWIPMVAVLAILMMVHCMVYLWHLLRCFAS"
FT   CDS             join(2671..2672,1..253)
FT                   /codon_start=1
FT                   /note="ORF V1"
FT                   /db_xref="GOA:Q67593"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q67593"
FT                   /protein_id="BAA00837.1"
FT                   /translation="MDPYGSRPSHPDDGALHGILVAFIAVLCLIGCLWAAYRLFLKECL
FT                   TDCSQHTSSGVVAGPRPAATGPTAVVVHNGAEAQRSSAF"
FT   CDS             219..986
FT                   /codon_start=1
FT                   /note="ORF V2"
FT                   /db_xref="GOA:P29073"
FT                   /db_xref="InterPro:IPR000143"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="UniProtKB/Swiss-Prot:P29073"
FT                   /protein_id="BAA00833.1"
FT                   /translation="MVQKRKDLRRSDAGSAVRAKLHKASTGKAFPVGKRAPLQIRSYAW
FT                   ETPATATTPSGPISITDGTIFMCNTIDPGTGDDQRSRHTTMLYKMSLNVVLWPGATTAQ
FT                   IVGPFRVNFWLVYDAAPTGVVPKLTDIFDVAYPKWGNTWQVSRSNVHRFIVKRKWKVDY
FT                   QSSGVPVGKRQSSGVEYAPVNNVVECNKFFEKLRVKTEWANTSTGAIGDVKKGALYLCA
FT                   NTRQMPAGDSVTTSCTTMMQGSTRLYFKVLGNQ"
FT   CDS             complement(1159..>1568)
FT                   /codon_start=3
FT                   /note="ORF C2 (ata start codon)"
FT                   /db_xref="GOA:Q67590"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="InterPro:IPR027417"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q67590"
FT                   /protein_id="BAA00834.1"
FT                   /translation="QPNGPRRPRSIYICGPSRTGKTTWARNIGRHNYYNSTVDFTHYDK
FT                   DAIYNVIDDVPFKFLPQWKALVGAQRDYIVNPKYGKKKKIPGGIPSIILTNDDEDWIKD
FT                   MKPAQVEYLHANAHVHYMYEGQKFYVLPAEE"
FT   CDS             complement(1620..2273)
FT                   /codon_start=1
FT                   /note="ORF C1"
FT                   /db_xref="GOA:Q67590"
FT                   /db_xref="GOA:Q67591"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="InterPro:IPR027417"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q67590"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q67591"
FT                   /protein_id="BAA00835.1"
FT                   /translation="MRAPASSAASNRPGPSNHPTPRWNSKQFFLTYPHCNLTPSELMKE
FT                   LFSRLTEKIPGYIKVSQEFHKDGDPHLHVLIQLNTKLCTRNPKFFDVQGFHPNIQPVRD
FT                   AEKVFGYISKTNGDSDEMGELQLRIKKPEKPTRDQRMAMIIASSTNRNEYLSMVRKEFP
FT                   FDWAIRLQQFEYSAAALFTEPPPVYQSPFPNEQIVCPPELVDIIDQEWNQVTTD"
XX
SQ   Sequence 2672 BP; 575 A; 623 C; 732 G; 742 T; 0 other;
     ggatccctat ggtagccgtc ctagccatcc tgatgatggt gcactgcatg gtatacttgt        60
     ggcatttatt gcggtgcttt gcctcatagg ttgcctttgg gcagcatacc gactgttcct       120
     taaggagtgc cttactgatt gcagtcagca cacttcatca ggcgtcgtcg cgggtcctcg       180
     tccggctgca acaggtccta ctgctgttgt tgtacataat ggtgcagaag cgcaaagatc       240
     ttcggcgttc tgatgccggt tctgccgttc gggccaaact gcataaggcc tcgactggga       300
     aggccttccc tgtagggaag cgggctcctc tgcagatacg gtcctatgca tgggagacgc       360
     ctgccacggc gaccacccct tccggaccta tcagtattac tgacggtacc atcttcatgt       420
     gtaacaccat tgaccctggg actggagacg atcagagatc gcggcatacc acgatgctct       480
     ataagatgtc attgaacgtg gtgctctggc ctggtgcgac tacggcccaa atagttgggc       540
     ctttccgcgt gaacttctgg cttgtgtatg atgctgcccc gactggagtt gtcccgaagc       600
     tgacggacat ctttgacgtg gcctatccga agtggggaaa cacttggcag gtttcccgct       660
     ctaatgtgca taggttcata gttaagcgta aatggaaggt ggactaccag tcctctggcg       720
     tccctgttgg caagagacag agcagcggtg ttgaatacgc ccctgttaat aatgtggtgg       780
     agtgcaacaa gttcttcgag aagctgcgtg tgaagaccga atgggcgaac acctctaccg       840
     gtgcaattgg ggacgtgaag aagggtgcgt tgtacctgtg tgccaatacc cggcagatgc       900
     ctgctggtga ctcagtcacc acgagttgta ccaccatgat gcaagggtct acccgattgt       960
     acttcaaagt gctggggaac cagtaataat aaaaacttat ttattatata ttgcaaacct      1020
     gtggattaca tgataatgtg agcgcattat gcgcgacaac aaactcaaga aattacataa      1080
     atttgggggg taggggcaaa gcaggcggct atgggcgcgc ccgcgggcaa cacacttaaa      1140
     aaaaacacaa caatagattc actcttcggc cggcaggacg tagaacttct gtccttcgta      1200
     catgtaatgt acgtgggcgt tcgcgtgcag gtactccact tgtgcaggtt tcatgtcctt      1260
     gatccagtct tcgtcgtcat tggttagaat gatggacggg attcccccag ggattttctt      1320
     cttcttaccg tacttgggat tcactatgta gtcacgctgt gctcccacca gcgccttcca      1380
     ctgcggcaag aacttgaaag gcacatcgtc gatgacgttg tagattgcat ctttgtcata      1440
     gtgtgtgaag tctacggttg agttgtagta gttgtgcctc ccgatgtttc tggcccaagt      1500
     ggtctttcca gttcggcttg ggccgcagat gtatatgctt cgtggtctcc gcggcccgtt      1560
     aggctgtatt caaaccactg ttggtttgta agtattcaag aaatttgaaa gagtgaagct      1620
     taatcggtag ttacctggtt ccattcctgg tctatgatgt caacgagctc cggcggacag      1680
     acgatctgct catttgggaa cggtgactga tataccggag gtggttcggt aaacaaggct      1740
     gctgcactgt attcaaactg ctggagtctg atggcccagt caaatgggaa ttctttacgg      1800
     accatggaca ggtattcatt cctattggtg gaggaggcta ttatcatagc catcctttga      1860
     tcacgggtag gcttctcggg tttcttgatc ctgagttgga gttcacccat ttcatcagag      1920
     tcaccgttgg ttttggatat gtatccgaaa accttttcag catctctgac gggctgaatg      1980
     tttgggtgga aaccctgaac atcaaagaac ttggggttcc ttgtgcatag tttggtgttt      2040
     agctgtataa ggacatggag atgcgggtcc ccgtccttat ggaactcttg ggatacctta      2100
     atgtatcctg gaattttctc ggtcaggcga gagaacaatt ccttcatcag ctcggatggt      2160
     gttaggttgc agtgtggata ggtaaggaag aattgcttgc tgttccaacg tggtgttgga      2220
     tggtttgaag gaccaggacg gttggatgct gcagatgatg caggtgccct catctctact      2280
     actctatggg tgtggctccg atgctctcag aaaacttgct actggtttcg ctggtgccgg      2340
     tgccacccct cgttagatgg gctgcgtatt tataatgggc cggcggggga gcgaaaccaa      2400
     taatattacc gctccccctc cctggcccat tagtaggccc cttgcctcgg tgcgctgcgc      2460
     ctttggtccc cgttccttgc cgcctttggc agaagatcgc actcaggctg ctgtaaaatg      2520
     gcaccgccat ttgagtgttt ttgctttggt gcctttggtt tgcggcttta aaaagaggcg      2580
     gaggctcaga gatcgcacca aaaccaaagg tacgcaggtt gcttgtcttc gaacttgggt      2640
     cattaagttt tgcttcgttt gtaagttttt at                                    2672
//