ID   D01015; SV 1; linear; genomic RNA; STD; VRL; 2214 BP.
XX
AC   D01015;
XX
DT   05-AUG-1992 (Rel. 33, Created)
DT   07-DEC-2007 (Rel. 94, Last updated, Version 7)
XX
DE   Tomato aspermy virus RNA 3 genome segment, complete sequence.
XX
KW   .
XX
OS   Tomato aspermy virus
OC   Viruses; Riboviria; Bromoviridae; Cucumovirus.
XX
RN   [1]
RP   1-2214
RX   PUBMED; 1990057.
RA   O'Reilly D., Thomas C.J., Coutts R.H.;
RT   "Tomato aspermy virus has an evolutionary relationship with other
RT   tripartite RNA plant viruses";
RL   J. Gen. Virol. 72:1-7(1991).
XX
DR   MD5; 6d84a4303ccb287fe8fd98f2e22e645c.
DR   RFAM; RF01084; TLS-PK3.
XX
CC   These data kindly submitted in computer readable form by:
CC   David O'Reilly
CC   Advanced Technologies
CC   (Cambridge) Ltd.
CC   Unit 210
CC   Cambridge Science Park
CC   Cambridge CB4 4WA
CC   England
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2214
FT                   /organism="Tomato aspermy virus"
FT                   /segment="3"
FT                   /strain="C"
FT                   /isolate="chrysanthemum"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12315"
FT   CDS             90..923
FT                   /codon_start=1
FT                   /product="3a protein"
FT                   /db_xref="GOA:P23626"
FT                   /db_xref="InterPro:IPR000603"
FT                   /db_xref="UniProtKB/Swiss-Prot:P23626"
FT                   /protein_id="BAA00819.1"
FT                   /translation="MAFSGTSRTLTQQSSAASTDELHNILFSRRAIQEMATKCDLGRHH
FT                   WMRADNAVCVRPLVPETTSNLLTRWFVSGYEAGELPSKGYMSVPQVLCAVTRTVTSDAE
FT                   GSLRIYLADLGDKERAPIDAQVVSLHNRDLPAIVSFHPTYDCPMEQLNGVGRCFALVIE
FT                   RCGYIGHNGTTASVCSNWQPKFSSKNNNYKPAAAGKTLVLPYDRLSELSGPSAVARLLK
FT                   SQLNMSASRIQLPGYVFNVRYVVSLRILRNRQSQPNARVDSEPQVFSKPVVVNGI"
FT   CDS             1219..1908
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:P23627"
FT                   /db_xref="InterPro:IPR000247"
FT                   /db_xref="InterPro:IPR023800"
FT                   /db_xref="InterPro:IPR037137"
FT                   /db_xref="PDB:1LAJ"
FT                   /db_xref="UniProtKB/Swiss-Prot:P23627"
FT                   /protein_id="BAA00820.1"
FT                   /translation="MAQNGTGGGSRRPRRGRRNNNNNNSTARDKALLALTQQVNRLANI
FT                   ASSSAPSLQHPTFIASKKCRAGYTYTSLDVRPTRTEKDKSFGQRLIIPVPVSEYPKKKV
FT                   SCVQVRLNPSPKFNSTIWVSLRRLDETTLLTSENVFKLFTDGLAAVLIYQHVPTGIQPN
FT                   NKITFDMSNVGAEIGDMGKYALIVYSKDDVLEADEMVIHIDIEHQRIPSLQRSRCDSTR
FT                   MHDVRRR"
XX
SQ   Sequence 2214 BP; 543 A; 512 C; 515 G; 644 T; 0 other;
     gtttaccaac caaccaacca ctactatcta tctatctgtg tgtgtgtgtg tgtgtgtgtg        60
     tgtgtgtgtt gtgtgtgtgt aatcctccta tggcattttc aggtacaagt cggactctaa       120
     cacaacagtc ctctgcggcg tcaactgatg agctacataa catattattt agccgcagag       180
     ccatccaaga gatggcgaca aaatgcgatc tcggtcgcca ccactggatg cgcgccgata       240
     atgcggtgtg tgtgcgaccc ctcgttccag aaaccacgtc caatctactg acgcggtggt       300
     tcgtctccgg gtatgaagct ggagagttac catccaaggg atatatgagc gtccctcaag       360
     ttctttgcgc cgtcaccaga acagtcactt cagatgctga aggttccctt cgcatatatc       420
     tagctgatct tggtgataag gaacgtgcac ctatcgatgc acaagtcgtc agcttacata       480
     accgcgatct ccctgccatt gtctccttcc atcctactta tgactgtcct atggaacagt       540
     tgaatggagt cggtaggtgt tttgcacttg ttatagaaag atgcggttat attggacata       600
     acggaactac cgcgagcgtg tgtagtaact ggcaaccgaa gttttcttcg aagaataata       660
     attacaagcc agccgccgca ggtaagactc tagtactacc ctatgacaga ttatctgagc       720
     tttcgggacc atcagccgta gccagattac tgaaatcgca gctcaatatg tcagcatccc       780
     gtattcagtt acctggatac gtgttcaacg tgcgatacgt agtgagtctg aggatcttga       840
     gaaatcgaca gagccaacct aacgctaggg ttgattcgga accgcaggtg ttttcaaagc       900
     cggttgtggt gaacggtatt tgagcctgtt gttatatata tatgtgtatt tgtgttatgt       960
     gtatagtata tatatgcaag tgtaaatcgt tgtgttgtag attgatcact tgagttccat      1020
     ggattgggaa gggtacacat ctggtttatc aaagcccgtg acattacttt ttgggttcaa      1080
     ttcccattag tccctgtcag gttcctttat cttcacggat gcttctccat gatgtagcgt      1140
     ttaagtatca atctgttgtt gtttgtgctt aaatttttca cttattgtta gtgtttcacc      1200
     actgtcacac actctagaat ggcccaaaac ggtacgggag gaggaagccg acgtccacgt      1260
     cgtggtcgtc gtaataataa caacaacaac tcgactgctc gtgataaagc tcttttggct      1320
     ttgacgcagc aagtcaatcg cttagcgaat atagcttcct ctagtgcgcc atcccttcaa      1380
     catccgactt ttattgctag caagaagtgt cgtgcaggtt atacttacac ttcgttggat      1440
     gttcgaccga ctagaactga gaaggacaag agtttcggtc aaaggttaat tatccctgta      1500
     cccgtgtctg aatatcctaa gaagaaggtc tcatgtgtgc aagtgagact gaacccatcc      1560
     ccaaagttca attctacgat ttgggtctcg cttcgtcgtc tggacgaaac gactcttctt      1620
     acttctgaaa acgtgtttaa actgttcacc gacggtcttg cggccgtcct tatttatcag      1680
     cacgttccca ccggtattca acctaacaat aagatcacct tcgacatgtc taatgtcggt      1740
     gctgagatcg gcgatatggg taaatatgcc ctaatagtct attctaaaga cgatgtcctc      1800
     gaagccgatg aaatggtgat ccacattgat atagagcacc agcgtattcc ttcgcttcaa      1860
     cgctcccggt gtgattcgac acgcatgcac gacgtccgaa gacgttaaac tacgcttgaa      1920
     ccgtgttcga gtgtctgagt tggtagtatt gctctaaact acctgaagtc actaaatgct      1980
     tatgcagtga acgggttgtc catccagcta acggctaaaa tggtcagtca tatcgtgaga      2040
     tatgccgtcg gtctttgatc gatgaggtgc ctttgaaccc tttatcccgg ggttcttcgg      2100
     aaggtgagac ttgaattcca tgtagagtct cgtcgtgcac ggtatcacac tgatgatacc      2160
     ttcagagtgc aggcatcgcc tacggttttt ccgtaggtcc ccctaggggt ccca            2214
//