ID D00941; SV 1; circular; genomic DNA; STD; VRL; 2547 BP. XX AC D00941; XX DT 10-JUN-1992 (Rel. 32, Created) DT 03-JUN-2002 (Rel. 72, Last updated, Version 6) XX DE Potato yellow mosaic virus (PYMV) DNA B, complete genome sequence. XX KW BL1; BR1; DNA B. XX OS Potato yellow mosaic virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2547 RX PUBMED; 1856690. RA Coutts R.H., Coffin R.S., Roberts E.J., Hamilton W.D.; RT "The nucleotide sequence of the infectious cloned DNA components of potato RT yellow mosaic virus"; RL J. Gen. Virol. 72:1515-1520(1991). XX RN [2] RX DOI; 10.1105/tpc.6.3.405. RX PUBMED; 8180499. RA Fontes E., Gladfelter H., Schaffer R., Petty I., Hanley-Bowdoin L.; RT "Geminivirus replication origins have a modular organization"; RL Plant Cell 6(3):405-416(1994). XX DR MD5; 889877adec8abe1fe60f0d373894ae61. XX CC The genome of PYMV is composed of two single-stranded CC DNAs A and B. Nucleotide sequences of DNAs A and B revealed the CC presence of 6 potential coding regions for proteins arranged CC bi-directionarily in a leftward (L) and rightward (R) orientation CC (AL1,2,3 and AR1 in A,BL1 and BR1 in B). XX FH Key Location/Qualifiers FH FT source 1..2547 FT /organism="Potato yellow mosaic virus" FT /mol_type="genomic DNA" FT /clone="pMBH2" FT /note="5'end of the 268 base sequence common to both DNAs A FT and B." FT /db_xref="taxon:10827" FT CDS 575..1345 FT /codon_start=1 FT /product="BR1" FT /db_xref="GOA:P27268" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/Swiss-Prot:P27268" FT /protein_id="BAA00783.1" FT /translation="MYPNRHRRASFCSQPRTYPRNSLIRQQSLFKRNVSKRRPFQTVKM FT VDDSMMKAQRIHENQYGPDFSLAHNTAVSTFISYPDIAKSLPNRTRSYIKLKRLRFKGI FT VKVERVHVEVNMDCSVPKTEGVFSLVIVVDRKPHLGPSGGLPTFDELFGARIHSHGNLA FT IVPSLKDRFYIRHVLKRVISVEKDTMMVDIEGVVALSSRRFNCWAGFKDLDIESRKGVY FT DNINKNALLVYYCWMSDTVSKASTFVSFDLDYIG" FT CDS complement(1367..2248) FT /codon_start=1 FT /product="BL1" FT /db_xref="GOA:P27267" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/Swiss-Prot:P27267" FT /protein_id="BAA00784.1" FT /translation="MNSQLVNPPHAFNYIESQRDEYQLSHDLTEIILQFPSTAAQLTAR FT LSRSCMKIDHCVIEYRQQVPINATGSVIVEIHDKRMTDNESLQASWTFPLRCNIDLHYF FT SASFFSLKDPIPWKLYYRVSDTNVHQRTHFAKFKGKLKLSTAKHSVDIPFRAPTVKILS FT KQFTDKDVDFSHVDYGRWERKPIRCASMSRVGLRGPIEIRPGESWASRSTIGVGQSEGE FT SEIENELHTYRDLQRLGASVLDPGESASIVGANMAQSNITMSVAQLNELVRTTVQECIK FT SNCNSSQPKNFK" XX SQ Sequence 2547 BP; 681 A; 509 C; 558 G; 799 T; 0 other; tttcggggca ttttgataaa tattagtgtt cccccgatat gttcccccaa ttgctctggc 60 cctcaaaact cttatgaatt gggggaactg ggggaactta tatagtagaa gttcctaaag 120 gcagatcaac acgtgcggcc atccgttata atattaccgg atggccgcga gattttttat 180 actgggcttt ctactaaggc ccaagtatga ttggactcta ggcccatttt ttagcggtcc 240 ctctttttcc tcgtcctttc tctgctgttt ccttttactt taatttaaat cactcttaaa 300 ttaaatatgt tgtgatcaat ttcaacagct gtcccgcata atatatgtac tgacgacgtg 360 ggtaattctc gaccaagtta cagtgttaag tcgaaattga ttttaacgtc tctccattta 420 tgagctcatg gtcctattaa gcattacatt acacgtgtac catttaaatt gatcgtgtgg 480 agtcaattta attaattgta taacctgata tgtctatata ttcgctgact aggaatgagc 540 tcattattac gtggtacaaa gacattacat gataatgtat cctaataggc acaggcgtgc 600 ttctttttgt agccagccac gtacttaccc acgtaatagt ttgattagac agcagtcatt 660 attcaagcgt aatgttagca aacgacgacc atttcaaacc gtgaagatgg ttgatgactc 720 catgatgaag gcacaacgta ttcatgagaa tcaatacggt ccagattttt cactggccca 780 taatacagcc gtctctacat ttataagtta ccctgatatt gctaagtctc tgcccaatag 840 aaccaggtca tatattaagc taaaacgact tcggttcaag ggtattgtga aggtggaacg 900 tgtacatgta gaggttaaca tggactgttc tgtgcctaag accgaaggag ttttctcttt 960 ggttattgta gtggatcgta aacctcacct tggaccctct gggggactgc ctacatttga 1020 cgagctattt ggcgctagga tccacagtca tggtaacttg gcaatagttc catctctgaa 1080 ggatcggttc tacatacgcc atgtactgaa gcgtgtgata tcagtcgaga aggacaccat 1140 gatggtggac atagaaggtg ttgtagccct ttctagcaga cgttttaatt gttgggctgg 1200 ttttaaggac cttgacatag agtcccgaaa gggtgtttat gataacatta ataagaacgc 1260 cctgttagtt tattattgtt ggatgtcgga tacagtatcc aaagcatcca catttgtatc 1320 gtttgatctt gattatattg gatgattgta ttcactaata caaattttat ttaaaatttt 1380 ttggctgaga actattacaa ttactcttta tacattcttg gacagttgtc cttacaagtt 1440 catttaactg ggctacggac atggttatgt tcgattgggc catgttagca ccaactatag 1500 atgctgactc tcctggatct aggacgctgg ctcctagtct ttgcaaatct cgatacgtat 1560 gtagctcgtt ctctatctct gactcgccct ctgattgacc cactcctatt gtactcctgg 1620 aagcccatga ttcaccaggc cttatttcaa ttgggcctct gagcccaact ctggacattg 1680 atgcgcatct aatgggcttc ctctcccatc tcccgtagtc gacgtgcgag aaatccacgt 1740 ccttatctgt gaactgtttg gacaggatct tgaccgttgg tgctctgaac ggaatgtcta 1800 cggaatgttt cgccgtcgac agtttcagct tccctttgaa cttggcaaag tgtgtccgtt 1860 gatgaacgtt cgtgtcggaa actctgtaat agagtttcca tgggatagga tcttttaggg 1920 agaaaaagga agctgagaaa tagtggagat ctatgttgca tcttaacggg aacgtccatg 1980 acgcctgcag agattcgttg tctgtcatcc tcttatcatg aatctccact attacagacc 2040 cggtggcgtt gatgggtacc tgttgcctgt actcaattac gcagtggtct atcttcatac 2100 agctgcgact gagcctcgcc gttaactgcg ccgccgtcga cggaaattgc agtattatct 2160 cagttaggtc atgcgaaagc tgatattcat cccgttgaga ctctatgtaa ttgaaagcat 2220 gaggaggatt aactaactga gaattcattt attgaaaatt aggccgcgca gcggcaccgc 2280 ttccagaata tgaacaggaa aagaggatga tagggtttct cgaacaggca agacgatgat 2340 cttgaagaga agacagagaa atataatagt gctatggaag actctgaata tgttaatgtt 2400 caaggattag gtagtttata taaagaagtt gttactgctg aggtaccaat taagaaattt 2460 gaagttggga aagtgcatct tctttgctaa gatagtattg aggattcgta aggaaataat 2520 ttttggctta aatagagaac gagcctt 2547 //