ID D00915; SV 1; linear; genomic RNA; STD; VRL; 7342 BP. XX AC D00915; XX DT 02-JUL-1992 (Rel. 32, Created) DT 22-DEC-2007 (Rel. 94, Last updated, Version 7) XX DE Grapevine fanleaf virus gene for 253K polyprotein, complete cds. XX KW . XX OS Grapevine fanleaf virus OC Viruses; Riboviria; Picornavirales; Secoviridae; Comovirinae; Nepovirus. XX RN [1] RP 1-7342 RA Pinck L.; RT ; RL Submitted (22-MAR-1991) to the INSDC. RL Contact:Lothaire Pinck Institut de Biologie, Moleculaire des Plantes du RL CNRS (IBMP); 12 rue du General Zimmer, 67084 STRASBOURG Cedex, France XX RN [2] RX PUBMED; 1655953. RA Ritzenthaler C., Viry M., Pinck M., Fuchs M., Pinck L.; RT "Complete nucleotide sequence and genetic organization of grapevine fanleaf RT nepovirus RNA1"; RL J. Gen. Virol. 72:2357-2365(1991). XX RN [3] RX DOI; 10.1016/0042-6822(92)90931-E. RX PUBMED; 1519363. RA Margis R., Pinck L.; RT "Effects of site-directed mutagenesis on the presumed catalytic triad and RT substrate-binding pocket of grapevine fanleaf nepovirus 24-kDa proteinase"; RL Virology 190(2):884-888(1992). XX RN [4] RX DOI; 10.1006/viro.1994.1165. RX PUBMED; 8128640. RA Margis R., Viry M., Pinck M., Bardonnet N., Pinck L.; RT "Differential proteolytic activities of precursor and mature forms of the RT 24K proteinase of grapevine fanleaf nepovirus"; RL Virology 200(1):79-86(1994). XX DR MD5; 96b8e0837551325dc9fcb48eccb6ecd7. DR EuropePMC; PMC2861173; 20229114. DR EuropePMC; PMC3314827; 22218961. XX FH Key Location/Qualifiers FH FT source 1..7342 FT /organism="Grapevine fanleaf virus" FT /segment="1" FT /strain="F13" FT /mol_type="genomic RNA" FT /db_xref="taxon:12274" FT CDS 243..7097 FT /codon_start=1 FT /product="253K polyprotein" FT /db_xref="GOA:P29149" FT /db_xref="InterPro:IPR000605" FT /db_xref="InterPro:IPR001205" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR014759" FT /db_xref="UniProtKB/Swiss-Prot:P29149" FT /protein_id="BAA00761.1" FT /translation="MWQVPEGSQCCCTGKSFSNAEAKELRYVCSCWMSTRLVKAEAPPQ FT QSRKSGIAPTPLKSKGTIQVSLPKATGVKPSIHKSKGASVAPAPLLKQRCEVVVQYGPP FT ADIELVYPPLVREEEKSSNIVVLPPTQKVEVRVPVCCAPKWMVAIPKPPVKLAPKASKL FT RFPKGAVAYNGVNFIDTKGKVVLSEGAKRILRGIRVAAKQRLRAARRSAACKKVRAKRA FT LAEFEAIVQSERLDQLKTGFQVVLPAPKMSCSLKEAAPSTTSVVVVKKRKLPRLPKILP FT EQDFSCLEGFDWGEKSHPVEVDIEDDWILVEKPVLKRQAVQTAQGRATEALTRFAATSG FT FSLGAHQKVEDFASSGEAEYLMAGEFADLCLLSLVYNDAPTLSATIEELRDSKDFLEAI FT ELLKLELAEIPTDSTTCAPFKQWASAAKQMAKGVGTMVGDFTRAAGAAVVISFDMAVEF FT LQDKALKFCKRIFDVTMAPYLQHLASAHSILKKIWEKLSEWMESLKSKASLALEVMRQH FT AIFALGAMVIGGVVVLVEKVLIAAKIIPNCGIILGAFLTLFFASLGLTALECTAEEIFR FT MHACCKSAIYSMYSVAEPTMADEGESHTMGATQGLDNAIQALTRVGQSMISFKLGSFSY FT YAKIAQGFDQLARGKRAIGELTSWLIDLVGSIYSQVSGQESTFFDELSTIVCLDVRAWL FT LKSKRVRLQVETMAIGDRITLDTIAKLLEEGHKILVTAAGVPRKTSADFTMCIKEEVSK FT LEEVHARTACAGINEGMRAFPFWVYIFGASQSGKTTIANSIIIPALLEEMNLPKSSVYS FT RPKTGGFWSGYARQACVKVDDFYAIEQTPSLASSMIDVVNSEPYPLDMAYIHEKGMSMD FT SPLVVTTANTAVPPTNSQVVDLPSFYNRRAAVLEVRRKDGSFFTPRAYDSCIEVRFMHN FT KCPYVDSAGVPQGPAVNTPMDEGWITPSEAVAVLKNLLGEHILAEEAKLLEYRERIGND FT HPIYNAAKEFIGNMHYPGQWLTAEQKSTYGIKDDGFSFLAVDGKIYKYNVLGKLNPCES FT EPPHPNVIPWLEKKTLEIVHWDVHKHIATGPRNALVACFLQGLVQGQSKVESVERMGKD FT SSPEQQNFFKRLSLSERIYLRLCQIRIDNIQKEELAGSGRGPMAILRECLMKSKQVVVE FT NYSLLLTLVAILLLISAAYTLLSTVVALAGCSSFAGGMVAVTAVNNASIPCSEPRLEER FT YSPRNRFVSRISKIRGEGPSKGQGEHEELVTELYYYCDGVKKLISTCWFKGRSLLMTRH FT QALAVPIGNEIEVIYADGTTKKLVWPGRQEDGNCKGFVEFPENELVVFEHPHLLTLPIK FT YEKYFVDDADRQISPNVAVKCCVARLEDGIPQFHFWSKYATARSEVHTLKDEGGGNVYQ FT NKIRRYIVYAHEAKKYDCGALAVAVIQGIPKVIAMLVSGNRGVTYSSVIPNYSSSFIRG FT EVPYVPEDGLVSRGYRKVGYLHASDAPHVPSKTSFMKVPDELCFPYPDPKQPAILSAED FT ERLKGTIHEGYTPLRDGMKKFAEPMYLLEEKLLDEVAGDMVQTWYDPGEFLEDISLDQA FT INGDMDEEYFDPLVMDTSEGYPDVLDRKPGEKGKARFFVGEPGNRAFVAGCNPEKAYYQ FT LEEDSKTKIPSLVSIETPKDERLKRSKIDTPGTRLFSVLPLAYNLLLRVKFLSFSRLLM FT KKRGHLPCQVGINPYSREWTDLYHRLGELSDVGYNCDYKAFDGLITEQILSTIADMINA FT GYRDPVGNRQRKNLLLAICGRLSICGNQVYATEAGIPSGCALTVVLNSIFKELLMRYCF FT KKIVPPVYKECFDRCVVLITYGDDNVFTVAQSVMQYFTGDALKMQMAKLGVTITDGKDK FT SLSTIPARPLLELEFLKRGFVRSSGGMINAPLEKLSIMSSLVYIRSDGSDMLQKLLDNV FT NTALVELYLHGDRTYFESVRAFYFEKLPPGAYKELTTWFQAESFHECQKSGESGYKPQG FT LIEISHGAAFASFTQQAGTELEKHDICPGLSIAGTKYIATENEIVLSLSSVLPGDRNVF FT KLDLPCGDGIGRLPSKCSILNLRKPGLVMRLCKRAQDEKKTLVIRDERPYIGAWAVACI FT CGESFGFGQQSVLALYANLLGPNQRNGLASYFSDFESPIHIKKVHAKTNSYEGGEALKE FT IFTFCETIFYEATEMDTRKVMLQNQPDVYPSISLVGGVCFPNEGGEPGAMYSETDVTMA FT REVQGVYVSEACVKCCRRCVGVATRVVTDTQLFGNNLLKTHLKALRKIQNHTCLRK" FT mat_peptide 3894..3965 FT /product="VPg" FT mat_peptide 3966..4622 FT /product="protease" FT mat_peptide 4623..5627 FT /product="RNA polymerase" XX SQ Sequence 7342 BP; 1977 A; 1409 C; 1864 G; 2092 T; 0 other; atgaaaattt cccacaagtt cttacgttac cgtgattgca atcttttcct gtgaagagtt 60 taagaaactc aagattgaaa tcctttgcga agagtttaag aaactcaccc ctcgaagcgt 120 ttaagaaacg cattgtttta ttgtgcttgt tgcttatttt gtgcagttta cttttaatct 180 acatatttta ctgtgttatt tatttaagtt taattttgta gttgtaaaag ttgtttgcca 240 ctatgtggca ggtgcctgag ggctcccagt gctgctgcac tgggaagtcc ttttcaaacg 300 cggaggctaa ggaactccgc tacgtgtgct catgttggat gagcacacgt cttgttaagg 360 ctgaggctcc tcctcagcaa tcaaggaaga gtgggatagc gcccactccc ctaaaatcca 420 aagggaccat tcaggtctca ctcccaaagg ctactggggt caaacccagt atccataaat 480 ccaaaggagc ttctgtggct cctgcacctt tgcttaagca aaggtgtgaa gtagtcgttc 540 aatatgggcc tcctgccgat attgaattgg tctacccgcc tcttgtgcgg gaggaggaga 600 agtcctccaa tatagtggtt ctgccaccta cccaaaaggt ggaagtaagg gtgccagttt 660 gctgtgcacc caagtggatg gtggctatcc ctaagccacc ggtgaagcta gcccctaaag 720 ctagcaagct acggtttcct aaaggagccg tagcttacaa tggtgtcaat tttattgaca 780 ctaaggggaa agtcgtccta tctgagggcg caaagaggat ccttaggggg atccgcgttg 840 ctgcaaagca acgtcttcgt gctgcgcgca ggtctgctgc gtgcaagaag gtgagggcca 900 agcgtgctct tgccgagttt gaggcaatcg ttcaaagtga acgattggac cagttaaaga 960 ctgggttcca agtggtgctt ccagcaccaa agatgagctg cagcttaaaa gaagctgctc 1020 cttctaccac ttctgtggtg gtagttaaga agaggaagct gccaaggctt cctaaaattc 1080 tgcctgagca ggacttctcc tgcttagagg gctttgactg gggggagaaa tcccacccag 1140 ttgaggtaga catcgaggat gattggatcc tcgtggaaaa acctgtcctt aagagacagg 1200 ctgtgcaaac tgcacagggc agggcaaccg aggccttaac tcggtttgca gctaccagtg 1260 gcttctcact gggcgcccac caaaaggtgg aagatttcgc ttcgtctggt gaagcggaat 1320 atttgatggc aggagagttt gcagacctct gcttgctatc tttggtgtat aatgatgcac 1380 cgacgttgtc tgcgactatt gaggaactca gggatagcaa agattttcta gaggctatcg 1440 aactcctcaa gttggaatta gctgaaattc caacagactc cactacatgt gccccattta 1500 aacaatgggc ttctgctgcc aagcagatgg ctaaaggggt tggcactatg gttggggatt 1560 ttactagagc tgctggagcc gctgtcgtta tctcttttga tatggcagtg gaatttctgc 1620 aagataaagc gttaaagttc tgtaaaagaa tctttgacgt aacaatggct ccatatctcc 1680 agcatcttgc cagtgcacat tccatcctta agaagatttg ggaaaaattg tcagaatgga 1740 tggaaagcct caagagtaaa gctagtttag cacttgaagt aatgcggcaa cacgccattt 1800 tcgctttagg tgctatggtt ataggaggtg tagtagtgtt ggtagaaaaa gtgcttattg 1860 cagccaaaat tatccctaat tgtgggatta ttctgggtgc ctttttgaca cttttctttg 1920 ctagcctggg gttaacagcc ctggagtgca ctgcagagga aatcttcaga atgcatgcgt 1980 gttgtaaaag tgctatttac tccatgtatt ctgttgcaga gcctactatg gctgatgagg 2040 gagaatctca cactatgggg gcgactcagg gacttgataa tgcaattcag gccctgactc 2100 gagtaggaca gagtatgata agcttcaaac tggggagctt ttcatattat gcaaagatag 2160 cccaggggtt tgaccaactt gcaaggggta agcgagcaat aggtgaactt actagttggc 2220 tcatcgatct tgttggaagt atttactccc aggtttctgg acaggaaagt actttttttg 2280 acgagctttc tacaattgtt tgcctagatg tgagagcatg gctactgaaa agtaagcgtg 2340 ttcggttgca agtggaaaca atggccatag gcgatagaat aaccttggat actattgcca 2400 aattgttaga agaaggccac aagatactgg tcactgcggc aggtgttcca aggaaaacgt 2460 ctgctgattt tacaatgtgc atcaaggaag aagtgtctaa gttggaagaa gtgcatgcca 2520 gaacggcatg tgcgggaatc aatgagggta tgcgagcttt tcctttttgg gtgtacattt 2580 ttggtgcttc acagtctggg aagacaacaa tagcaaattc aatcattatt ccagctttgc 2640 tggaagaaat gaatcttccc aagagctcag tttattccag gcccaagact ggtgggtttt 2700 ggagtggtta tgctaggcaa gcatgtgtga aagttgacga tttttatgca attgagcaga 2760 cccctagcct ggcgagttct atgattgatg tggtgaattc agaaccttat cccctcgaca 2820 tggcttacat tcacgagaag ggaatgtcaa tggattctcc attagttgta accactgcaa 2880 ataccgccgt gcctcctacc aattctcagg tggtggactt gccgtcattt tataacagga 2940 gggcggcggt actggaagta cgcaggaagg atgggagttt ctttacaccg cgggcgtatg 3000 attcatgcat tgaagttcgc ttcatgcata ataagtgtcc gtatgttgat tctgctgggg 3060 tgcctcaggg ccctgcagta aacactccca tggatgaagg atggatcact ccaagtgagg 3120 ctgttgcagt tctcaaaaat ctcttgggtg aacacatttt ggctgaggaa gcaaagctgc 3180 tggaatacag agagcggatt ggtaatgacc atcccatata taacgcagca aaggaattca 3240 taggcaacat gcactatcct gggcagtggc tgactgctga acagaagagt acctatggaa 3300 tcaaggatga tggattctct ttccttgcgg ttgatggaaa gatatacaag tacaatgtac 3360 tgggtaagtt gaatccatgt gagtctgaac caccacatcc caatgtgatt ccatggttgg 3420 aaaagaaaac attagaaatt gtacattggg atgtgcataa acatattgcc actggtcccc 3480 gcaatgcact ggttgcatgc tttttgcagg gcttggtcca aggacaaagc aaagtagaga 3540 gtgtggaacg tatggggaaa gatagttctc cggaacaaca gaattttttt aaacgcttga 3600 gtttatccga gagaatttat ctgaggctgt gccaaatccg cattgataat atccagaaag 3660 aagagctggc gggttctggt agagggccca tggcaatatt gagagagtgt ctgatgaaga 3720 gtaagcaggt agtggtggaa aactactcat tgctattgac attggtggct attctcttgc 3780 ttatcagtgc tgcttacacg ctactctcaa cagtggtggc tctggcgggt tgctctagtt 3840 ttgctggtgg tatggttgca gtgacggctg tcaacaatgc ttctataccg tgttcagagc 3900 ctcgcttgga ggaaagatat tcccctagaa atcgttttgt ctcgcgaatt tctaaaatta 3960 ggggtgaggg accttccaaa ggacaaggtg agcatgagga attggttact gagctctatt 4020 actattgtga tggagttaag aagctaattt ccacgtgttg gtttaaggga aggtcactct 4080 tgatgacgag acatcaagcc ctggccgttc cgatcggcaa tgaaattgaa gtaatatacg 4140 ctgacggaac aacaaaaaag ttagtttggc caggcaggca ggaggatggc aattgcaaag 4200 gcttcgtcga attccctgaa aatgagttag ttgtctttga gcatccacac ttattgacac 4260 tgcccattaa gtatgagaag tactttgttg atgatgccga tagacagatt tcccccaacg 4320 ttgcggttaa gtgttgcgtt gcgcgcttag aagatggaat tccccaattc cacttttgga 4380 gcaaatatgc aacagcccgc agtgaagttc atacgctgaa agatgagggc gggggaaatg 4440 tctaccagaa caagataagg cgctatattg tttatgcgca tgaagcaaag aagtatgatt 4500 gtggagcctt ggctgtggct gtgatccaag gaatcccaaa agtcatcgca atgcttgttt 4560 ctgggaatag aggtgtgacc tactcttctg tgattccaaa ctacagttct tcttttatta 4620 ggggagaagt gccatatgta ccagaagatg ggttagtgtc gaggggatat aggaaagtgg 4680 gttatttgca cgcatcggat gcgccacatg tgccttctaa gacttccttc atgaaggtac 4740 cagatgaatt gtgctttcca tatcctgatc ctaagcagcc cgccatcctt agcgcagagg 4800 atgaacgcct taagggaacg atccatgaag gatacactcc gttaagggat ggcatgaaga 4860 agtttgctga gccaatgtat ctgctagagg aaaaactact cgatgaagtt gcaggtgaca 4920 tggttcagac gtggtatgac ccgggtgaat tccttgaaga tatttcttta gatcaagcta 4980 tcaatgggga catggatgag gaatattttg accccctagt gatggacacg tctgaaggat 5040 atcccgatgt tttagatcgt aaacctgggg aaaagggaaa ggcgagattc tttgttgggg 5100 aaccaggaaa tagagccttt gtagctggtt gtaatcctga aaaggcttat taccaactag 5160 aagaggactc taaaaccaag ataccttcct tggttagtat agaaacccca aaagacgaga 5220 gattaaaaag aagtaaaatc gatactcctg gtacgagatt attttctgtg ctgcccttgg 5280 catataatct cttgttgaga gtaaaatttt tgtctttttc ccgcctactg atgaagaaga 5340 gaggccacct gccttgtcaa gtgggcatca atccttatag tcgcgaatgg accgatttgt 5400 atcaccgctt aggtgaactc tctgatgtcg gatacaattg tgattataag gcttttgatg 5460 gcctaattac ggagcaaatt ttgagtacga tcgccgatat gatcaatgct ggatatcgtg 5520 accctgtcgg caataggcag aggaaaaatt tgctcctagc aatatgtgga cgcctctcta 5580 tctgtggaaa tcaagtgtat gccactgaag caggcatacc ttcaggctgt gctctcacag 5640 tagtactcaa ttccattttt aaagaactac tgatgagata ttgcttcaag aaaatagttc 5700 cccctgtgta caaggaatgt tttgacagat gtgtcgtgct cattacctat ggtgatgata 5760 atgtcttcac tgtggcacaa tctgtcatgc agtattttac tggcgatgct ctgaaaatgc 5820 aaatggcaaa gcttggggta actattactg atgggaaaga taagtctctt tccactattc 5880 cagcccgtcc actgctggaa ttagagtttt tgaaacgtgg atttgttaga agctctgggg 5940 gtatgataaa tgcgcctttg gaaaaattat caataatgag ttctttggtc tacatcagaa 6000 gtgatggctc agacatgttg cagaaactat tggacaatgt taatactgca cttgtcgagc 6060 tttatctaca tggtgataga acttattttg aatcagtcag agctttttac ttcgagaaac 6120 tccctcctgg cgcttataag gagttgacaa cgtggtttca agcagaatca tttcatgagt 6180 gtcagaagag tggagagagt ggttataagc cacaagggct cattgagatt agtcatggag 6240 cagcttttgc cagttttact caacaagctg gtacagagtt ggaaaagcat gacatttgcc 6300 ctggcttatc gattgcagga actaagtaca ttgctactga gaatgagatt gttttgtctc 6360 ttagttccgt cctacccggg gatagaaatg ttttcaagtt ggatctgcct tgtggagacg 6420 ggatagggcg tttgccttcc aaatgcagta tcttaaactt gagaaaaccg ggcttggtta 6480 tgagattgtg caagcgtgcc caagatgaaa agaagacctt agttattcgt gacgaaaggc 6540 catacattgg tgcatgggca gttgcttgca tatgtggaga gagttttggc ttcgggcaac 6600 agagcgttct tgcgctttat gccaacttgt tgggaccaaa tcagaggaat ggcttagcca 6660 gttatttttc tgattttgaa agtcccattc atatcaagaa agtccatgcc aaaacaaact 6720 cttatgaggg gggtgaagct ttaaaggaaa ttttcacttt ttgtgagact attttctatg 6780 aagccaccga aatggatact aggaaagtga tgttgcaaaa tcaaccagac gtctatccta 6840 gtataagtct tgttgggggg gtttgtttcc caaatgaggg aggagagcct ggagccatgt 6900 actcggaaac agatgttacg atggctagag aggttcaagg agtctatgta agtgaagcgt 6960 gcgtgaaatg ttgcaggcgt tgtgtaggag tagcaaccag ggttgtgact gatacgcaac 7020 tttttggcaa caatctttta aagactcatc ttaaggcttt gaggaaaatt cagaatcata 7080 catgccttag gaaataagcc ttccaattct tggtactggg ataaccaagt ttaaataacc 7140 cagtttcttt tgcctttcat gctcttttag gcaattgaat attagagcat ttgtgttatt 7200 gtttgtttta acttgttttc tgctttagtg tgttttcttt catgctttta gtggcgacag 7260 tgtgttgttt gtcctttgga accacttgcc ttgttggacg caaaaagatt ttcttttttc 7320 tttttactgt tatgcaaatt tt 7342 //