ID D00615; SV 1; linear; genomic RNA; STD; VRL; 3684 BP. XX AC D00615; XX DT 08-NOV-1990 (Rel. 25, Created) DT 07-DEC-2007 (Rel. 94, Last updated, Version 7) XX DE Ornithogalum mosaic virus gene for polyprotein precursor, partial cds DE (nuclear inclusion proteins and coat protein region). XX KW coat protein; NIa; NIb; nuclear inclusion protein. XX OS Ornithogalum mosaic virus OC Viruses; Riboviria; Potyviridae; Potyvirus. XX RN [1] RP 1-3684 RA Burger J.T., Brand R.J., Rybicki E.P.; RT "The molecular cloning and nucleotide sequencing of the 3'-terminal region RT of Ornithogalum mosaic virus"; RL Unpublished. XX DR MD5; 0ee591b9d7a2c5084dcbe47a9f9e0736. DR EuropePMC; PMC5877448; 29607262. XX CC These data kindly submitted in computer readable form by: CC Johan T. Burger CC Department of Microbiology, University of Cape Town CC Private Bag, Rondebosch CC South Africa 7700 XX FH Key Location/Qualifiers FH FT source 1..3684 FT /organism="Ornithogalum mosaic virus" FT /strain="OMV-O" FT /mol_type="genomic RNA" FT /clone="pOM16 and pOM21" FT /db_xref="taxon:12204" FT CDS <1..3413 FT /codon_start=3 FT /product="polyprotein precursor" FT /db_xref="GOA:P20234" FT /db_xref="InterPro:IPR001205" FT /db_xref="InterPro:IPR001592" FT /db_xref="InterPro:IPR001730" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR009003" FT /db_xref="UniProtKB/Swiss-Prot:P20234" FT /protein_id="BAA00490.1" FT /translation="EYTIVRYVDPLTGATQDENPLMAIDLVQEYFAKIRSQLVSEEKLE FT TQNIIANPGIQAYYMKNRGDAALKVDLTPHNPLLVTKTGTIAGFPENEFILRQTGKAVN FT VKMSEVPVENELEEVEHEGKNLNRGLRDYNVVSNVVCRLTNESDGHSASLFGLGYGGYI FT ITNRHLFKNNNGTLKVQSQHGDFIVKNTTQLKMVPVGKTDILIIRMPKDFPVLPQKLRF FT RAPANEDKVCLIASNFQERYVSSLVSETSSVYPVGNGEFWQHWISTKDGHCGLPLTSTK FT DGFIVGIHSLSTITNSKNFFASIPANFEEQYLAKLDQQDWTANWKYNPNEVSWNGLRLQ FT ENKPGRIFQAVKEVSALFSDAVYEQGQEVGWLFRELKDNLKAVAVLPNQLVTKHVVKGP FT CQCFIQYLNESPEASAFFKPLMGQYGKSILSKEAFVKDIMKYSKPIVLGEVDFIKFEEG FT YNNVLRMFHDIGFEKCEYVTDSMEVYKNLNLKAAVGAMYTGKKQQYFEGMSEDEIHQLV FT IASCFRLWSGKFGVWNGSLKAELRPLEKVQACKTRTFTAAPLDTLLGAKVCVDDFNAQF FT YDKHLTAPWTVGICKYYKGWDTFMNKLPEGWLYCDADGSQFDSSLTPFLINSVLRLRLE FT FMEDWDIGARMLSNLYTEIIYTPIATPDGTVVKKFRGNNSGQPSTVVDNTLMVVLAMNY FT ALAKLSIPYEEMDSRIRYFANGDDLLVAVEPTKGGEILDSLQASFSELGLIYDFNDRTF FT DKTQLSFMSHQALWDGDMFIPKIKQERVVSILEWDRSTQPEHRIEAVCAAMIEAWGYPE FT LLQEIRKFYAFMVTQEPYSAIHAQGKTRYISERALVTLYKDEKVVLSDIGPYIQKLAEM FT SLGCVDEVVMHQADSMDAGGSSRPPAPLVRQQDQDVNVGTFSVARVKALSDKMMLPKVR FT GKTVLNLQHLVQYNPEQTEISNTRATRTQFNNWYDRVRDSYGVTDDQMAVILNGLMVWC FT IENGTSPNLNGNWTMMDGDEQIEYPLQPVLENAQPTFRQIMAHFSNAAEAYIEKRNSEQ FT RYMPRYGSQRNLNDYSLARYAFDFYEMTSRTANRAREAHIQMKAAALRNTKTKLFGLDG FT KVGTEEEDTERHVASDVNRNMHSLLGVNM" FT mat_peptide <1..1097 FT /product="nuclear inclusion protein" FT /note="NIa" FT mat_peptide 1098..2651 FT /product="nuclear inclusion protein" FT /note="NIb" FT mat_peptide 2652..3410 FT /product="coat protein" XX SQ Sequence 3684 BP; 1124 A; 708 C; 874 G; 978 T; 0 other; ctgaatacac cattgttcga tatgttgacc cactcactgg agcgacgcaa gatgagaatc 60 ctttgatggc aatagatctg gtccaggagt atttcgctaa aattcgtagc caattagtgt 120 ctgaagaaaa actggaaact caaaacatca ttgcgaatcc aggaattcaa gcttattaca 180 tgaagaacag aggagatgct gcactaaaag ttgatttaac tccgcataat cctctgttag 240 ttacgaagac tggaaccatt gcaggttttc ctgagaatga gttcattctc cgacaaacag 300 gcaaggcagt taatgttaaa atgtcggaag tgccagtgga gaatgaactt gaagaagttg 360 agcatgaagg gaagaacttg aatagaggac ttcgagacta caacgtggtt tcaaatgtgg 420 tgtgccgcct tacaaatgaa tccgatggcc actcggcctc gctctttggt ttgggttatg 480 gtggatacat catcacgaac agacacctgt tcaagaacaa caacggtact ctcaaagttc 540 aatcacaaca tggggacttc attgttaaaa acacaacaca actcaaaatg gtgccagttg 600 gaaagacaga tatcttaata attcgtatgc caaaggattt tccagtcctt ccccagaaac 660 ttcgatttcg agctcctgca aacgaggaca aagtctgtct aatagcttcg aattttcaag 720 agagatacgt ttctagtctc gtgtctgaga caagttccgt atacccagtt ggcaacggag 780 agttttggca gcattggata tcaacgaaag acggacattg tgggctgcca ttaacctcta 840 cgaaggacgg attcattgtt ggaattcaca gtttgtcaac aattacgaat tcaaagaact 900 ttttcgcctc aataccagca aattttgaag agcagtacct tgcaaagctg gaccagcaag 960 attggactgc taattggaag tacaatccaa atgaagtgag ttggaatggt ttacgattac 1020 aggaaaataa accagggaga atcttccaag cagtcaagga ggtatcagcc ctgttttctg 1080 acgctgttta cgaacaaggg caggaagtgg gatggctttt ccgagaactc aaagataatc 1140 ttaaagcggt ggccgtgctt ccaaatcaat tggtcacgaa acatgttgtg aaaggtcctt 1200 gtcagtgttt cattcaatat cttaacgaat cgccagaagc ttctgcattc tttaagccac 1260 tcatgggcca atacgggaaa agtattctaa gcaaagaagc gttcgtcaag gatattatga 1320 aatacagtaa accaattgtt cttggagagg tagactttat aaaattcgag gaagggtaca 1380 acaacgtgct cagaatgttt catgatattg gttttgagaa atgtgagtac gttacagaca 1440 gcatggaagt gtacaagaat ctcaatttga aagcggcagt tggggcaatg tacacaggca 1500 agaagcaaca gtactttgaa ggaatgagtg aggacgaaat tcaccagctg gttattgcca 1560 gttgcttccg actttggtct ggtaagtttg gagtctggaa tgggtcactc aaagccgaac 1620 tacgaccatt agagaaagtg caagcttgca aaacgcgaac atttacagcc gcgccgctgg 1680 acacgttact tggagcaaag gtttgtgttg atgattttaa cgctcaattt tatgacaaac 1740 acttaacggc accatggaca gtgggtatct gcaaatacta caaaggttgg gacactttca 1800 tgaacaaact tccagaaggt tggttatatt gcgatgctga cggctcacag ttcgatagct 1860 ctttaacacc tttccttatt aatagtgttt tgagacttcg gttggaattt atggaggatt 1920 gggatatagg agcacgcatg ctgtcaaatc tttatactga aataatttat acacccatag 1980 cgacacctga tggcacagtc gtgaagaagt ttcgtggtaa caatagcggg caaccatcca 2040 ccgttgttga caatacattg atggttgttt tggctatgaa ctatgcgttg gctaaacttt 2100 caataccata tgaagagatg gattcacgta tacgctattt tgcaaatggt gacgatcttc 2160 tggttgcagt tgagcctacc aaaggaggcg aaattcttga ctctctccaa gcctcttttt 2220 ctgagttggg gctcatttac gacttcaacg atcgaacttt tgacaaaacc caacttagtt 2280 tcatgtccca tcaagctttg tgggatggtg atatgtttat cccgaagatc aagcaagaac 2340 gtgtggtttc aatcttagag tgggatcgga gcacgcaacc tgaacaccga attgaagctg 2400 tctgtgcagc tatgattgaa gcgtggggtt atcctgaact actccaagag attagaaagt 2460 tttatgcatt catggtgact caagaaccgt atagtgcaat acacgcacaa ggcaaaacga 2520 gatatatatc tgagcgtgca cttgttacac tatacaaaga cgaaaaggtt gtgctaagtg 2580 acattggacc ttacatccag aagctggccg agatgagcct gggatgtgtc gatgaagtgg 2640 ttatgcatca agcagattct atggatgcag gaggatcgag cagaccacca gcgccgttgg 2700 tgagacaaca agatcaagat gttaacgttg gaacgttttc tgttgcgcga gtgaaggcgt 2760 tgagcgataa aatgatgtta cccaaggtgc gcggtaaaac ggtgcttaat ttacagcatc 2820 tggtgcagta caaccctgag caaactgaaa tctcaaacac tcgtgccaca cgaacacagt 2880 tcaacaattg gtacgatagg gttagagata gttatggggt tacagatgac caaatggctg 2940 ttatcctaaa tggtttgatg gtgtggtgca tcgagaatgg cacttcacca aatttgaatg 3000 gtaattggac gatgatggat ggcgatgagc agatcgaata tcctttgcaa ccagtccttg 3060 agaatgctca gccaacattc agacaaatta tggcgcattt ctcaaacgca gccgaggcgt 3120 acatcgaaaa gagaaactcg gaacaaaggt acatgccaag gtacggcagc caacgaaatc 3180 tgaacgacta cagcttggcc cgctatgcat ttgactttta tgaaatgaca tcccgaaccg 3240 ccaacagggc cagggaagca catatacaaa tgaaagcggc agctcttcgg aacaccaaaa 3300 cgaagttgtt tggtttagat gggaaagtgg gtaccgagga agaggacaca gaacggcatg 3360 ttgcaagcga tgtcaatcgc aacatgcatt cactacttgg tgttaatatg tgatttagtg 3420 aaagtgaact tgactcaagc gcgagttagt ttactctgtt agcatccttt cctttgaatt 3480 atgcgaagta tcatttacct tagtgaccaa cacagtcaag tattgggttg ggtgataagg 3540 caagtgagta ttatagtgtg atttcgaact tattattgtt gtattgtact cgttagatta 3600 ggtgactgtt ctagtttgct tggcgaatta caacaggtga ctactctagc aaatattata 3660 atatctcaat agtgtgttag agac 3684 //