ID D00607; SV 1; linear; genomic RNA; STD; VRL; 3195 BP. XX AC D00607; XX DT 08-NOV-1990 (Rel. 25, Created) DT 07-DEC-2007 (Rel. 94, Last updated, Version 5) XX DE Rice dwarf virus genome segment 3, complete sequence. XX KW . XX OS Rice dwarf virus OC Viruses; Riboviria; Reoviridae; Sedoreovirinae; Phytoreovirus. XX RN [1] RP 1-3195 RX DOI; 10.1093/nar/18.21.6419. RX PUBMED; 2243784. RA Yamada N., Uyeda I., Kudo H., Shikata E.; RT "Nucleotide sequence of rice dwarf virus genome segment 3"; RL Nucleic Acids Res. 18(21):6419-6419(1990). XX DR MD5; 20287c85e311ece49cb48bbd6b82f72e. XX CC These data kindly submitted in computer readable form by: CC Ichiro Uyeda CC Department of Botany, Faculty of Agriculture CC Hokkaido University CC Kita-ku, Kita 9, Nishi 9 CC Sapporo 060 CC Japan XX FH Key Location/Qualifiers FH FT source 1..3195 FT /organism="Rice dwarf virus" FT /segment="3" FT /mol_type="genomic RNA" FT /clone="pRDS[3-38, 3-105]" FT /db_xref="taxon:10991" FT CDS 39..3098 FT /codon_start=1 FT /note="ORF" FT /db_xref="GOA:P22472" FT /db_xref="InterPro:IPR015312" FT /db_xref="InterPro:IPR016029" FT /db_xref="PDB:1UF2" FT /db_xref="UniProtKB/Swiss-Prot:P22472" FT /protein_id="BAA00482.1" FT /translation="MDSTGRAYDGASEFKSVLVTEGTSHYTPVEVYNILDELKTIKITS FT TIAEQSVVSRTPIPLSKIGLQDVKKLFDINVIKCGSSLRIVDEPQVTFIVSYAKDIYDK FT FMCIEHDSAYEPSLTMHRVRVIYSMLNDYCAKMISEVPYESSFVGELPVKSVTLNKLGD FT RNMDALAEHLLFEHDVVNAQRENRIFYQRKSAPAVPVIFGDDLEPAVRERANLYHRYSV FT PYHQIELALHALANDLLSIQYCHPTVVYNYLSSRAPNFLRLDDQVSLKLTSAGIGTLMP FT RPVVQLLDYDLVYMSPLALNNLSSRLLRKISLHLVMQMVTAVQQDLGEVVSVSSNVTNP FT ASACLVRMNVQGVQTLAVFIAQSMLNPNISYGMISGLTLDCFSNFIYGACLMLFQALIP FT PSALTARQRLDINNRFAYFLIKCHATQATTARLVANQVIYPVDAIDQWQSNGRDVLVAI FT YNNLLPGELVLTNLIQTYFRGNTAQQAAEILIPADQTSYGANETRALSAPYLFGAPINM FT LAPDARLSTYKRDLALPDRSPILITTVEGQNSISIENLRHKTGLIRAMYLNGFVTQPPA FT WIRNANSNTALLSRFLDATPNLLGIYEAILANTYANAVNVYCDSVYRADIPIEWKLHQS FT VDPQDLLFGVFGIVPQYQILNEAVPDFFAGGEDILILQLIRAVYDTLSNKLGRNPADIF FT HLEEVFKVIEEIVSVLVQQKIDVRKYFTESMRSGSFSKPRWDNFLRRPVAQRLPNLYSV FT IMTQADHVYNYMTQLTHIIPITDCFYIVKNSGFVDRGSTGPVIASSSVYENVLKVVHTI FT ADFDAANALRLQRRRVDNTSYTDSLSDMFNGLRSISSSEFVRSVNGRSVFTEGRIDAIK FT VNMRAKFDLQFITEEGGYSKPPNVKKLMFSDFLSFLDSHKSDYRPPLLTVPITIGLNNL FT GETNSNTLRMRSEAIDEYFSSYVGAQILVPINVVDTRVYTEFSELRNFFTGDVVIRDDP FT FDVWDGVKATYIPIGVHGVRLDPNGDQPPL" XX SQ Sequence 3195 BP; 874 A; 681 C; 718 G; 922 T; 0 other; ggcaaaatcg agcgaacaat cctttatcct cgtgagctat ggacagtacc ggccgagcat 60 atgacggtgc gtctgaattc aaaagtgtcc ttgttaccga gggtacttca cactacacac 120 cagtggaagt atataacatc ctcgatgaat tgaaaaccat taaaataacg tctaccatag 180 ctgagcaatc tgtggtgtca cgtactccaa ttcctctctc aaaaattggt ttacaagatg 240 ttaagaaatt gtttgacatt aatgtcataa aatgtggctc atctttgcgg atagtggacg 300 aacctcaagt tacgttcatt gtgtcatacg caaaggatat ctatgataaa tttatgtgca 360 ttgaacatga ctccgcttat gaaccgagtc taacgatgca tagagtgcga gttatttact 420 cgatgctcaa tgactattgt gcaaaaatga tttcggaggt accctacgaa agtagcttcg 480 taggggagct ccctgtcaag tcagtgactc taaataaact gggtgacaga aatatggatg 540 ctttagctga acatctcttg tttgagcacg acgttgtgaa tgcgcagcga gagaaccgga 600 tcttctatca aagaaaatcc gcgcctgctg tgccagtcat atttggagat gacctggagc 660 cggctgtccg tgaaagagct aacctctacc atcgatattc ggttccgtat caccaaattg 720 agctggcatt gcatgcattg gcaaatgatt tattatcaat acaatactgt cacccgactg 780 tagtgtataa ctatttgagt tccagagctc caaactttct aaggttggat gatcaagtat 840 cgctgaaact aacatccgct gggataggta ctcttatgcc tagacctgtg gtacagctgc 900 ttgattatga tctagtctat atgtcaccgc tagccctgaa caatttatcc tcccgattgt 960 tgagaaagat ctccttgcac ttagtaatgc aaatggttac tgcagtgcag caagatctgg 1020 gcgaagtggt gagtgtgtcc tccaacgtta ccaatcccgc cagcgcttgt ctggtaagga 1080 tgaacgttca gggggtccaa actttggctg tattcatagc ccagtccatg ttaaatccaa 1140 acatatctta cggtatgata tctggattaa cgcttgactg tttttcgaat tttatttacg 1200 gcgcatgtct gatgttattt caagccctca ttccccccag tgctttgacg gctagacaaa 1260 gactagacat aaataaccgt tttgcatact ttctaattaa gtgtcatgct actcaagcaa 1320 cgacagctag gcttgtcgcg aatcaagtca tttacccagt ggatgcaatt gatcagtggc 1380 agtctaacgg aagagacgtt ctggttgcaa tttataataa tttgctacca ggtgagttgg 1440 tattaactaa tttaatacag acttacttta ggggtaacac tgcacagcaa gcggctgaaa 1500 tactgattcc tgcggaccag acttcttatg gcgccaatga gactcgcgct ctatcggcac 1560 catatctgtt tggagctcca atcaatatgc tcgccccaga tgctagattg tcaacgtata 1620 aacgcgatct cgctttgcct gaccgctccc caatactgat cacgacagta gaggggcaaa 1680 actcgatctc cattgagaat ttgaggcata agacgggctt gatacgtgct atgtatctaa 1740 atggcttcgt cacgcaacct ccggcgtgga ttcgtaatgc aaattcgaat actgcgctgc 1800 tatcacgatt tcttgatgct acgccgaact tattaggtat ttacgaagct attttagcta 1860 atacgtatgc caatgcggta aacgtttatt gcgattccgt ctaccgggca gatataccta 1920 ttgaatggaa gttacaccaa tcagtagatc ctcaggattt gctgtttggt gtatttggta 1980 ttgttccaca atatcaaatt ctgaatgaag cggttccgga tttcttcgct gggggtgaag 2040 acatcctaat actacagctc attcgagctg tgtatgacac gttgtcaaat aagcttggga 2100 ggaaccccgc tgacatattt catcttgaag aggtcttcaa agttatagaa gaaatagtgt 2160 cggtcttagt tcaacaaaag atagacgtca ggaagtattt cactgaaagt atgagaagcg 2220 gctcattctc aaaacccaga tgggataact ttctaaggcg tccagtcgct cagcgattac 2280 cgaacttata cagcgtcatt atgacgcagg cagatcatgt gtacaactac atgactcagc 2340 ttacccatat aataccaatt actgattgtt tctatatagt aaagaattca ggattcgtcg 2400 atcgaggctc gactggtcct gtgattgcat cctcatcagt ctatgaaaac gtgcttaagg 2460 tcgttcatac catagctgat tttgatgcag ctaatgcttt acgtctacag aggagacgtg 2520 tagacaatac gtcttacact gactctcttt ctgacatgtt caatgggtta cggtctatca 2580 gttctagtga attcgttaga tccgtcaatg gtcgctcagt gtttactgaa ggacgcattg 2640 atgcaatcaa agtgaatatg cgagcgaaat tcgatttgca gtttatcact gaggagggtg 2700 gttactcaaa acctccaaat gtgaaaaagc ttatgttttc ggactttcta agtttcttag 2760 atagtcataa gagcgattac aggccaccat tgcttactgt gccaatcacc ataggattaa 2820 ataacctggg tgaaactaat tcgaacacac tgcgtatgcg ttcggaggcg attgatgaat 2880 atttttcaag ttatgtcggt gcgcaaattt tggtaccgat taacgtcgta gacactcgag 2940 tctatactga attcagtgag ctacgaaatt tctttactgg tgatgtggtc attcgagatg 3000 acccatttga cgtctgggat ggcgtcaagg caacctacat cccgattggt gtgcatggag 3060 tccgcttgga tccgaatgga gatcagccgc ctctatgagc gcccggatgg catagctctg 3120 cgacgtgcga tgcagcgcaa acgaggacta ggctcccgag ggggctgaag tggattgttt 3180 tgcttggttc ctgat 3195 //