ID   D00606; SV 2; linear; genomic RNA; STD; VRL; 1800 BP.
XX
AC   D00606;
XX
DT   08-NOV-1990 (Rel. 25, Created)
DT   07-DEC-2007 (Rel. 94, Last updated, Version 6)
XX
DE   Rice black streaked dwarf virus genomic RNA, segment 10 sequence.
XX
KW   .
XX
OS   Rice black streaked dwarf virus
OC   Viruses; Riboviria; Reoviridae; Spinareovirinae; Fijivirus.
XX
RN   [1]
RP   1-1800
RA   Uyeda I., Azuhata F., Shikata E.;
RT   "Nucleotide sequence of rice black-streaked dwarf virus genome segment 10";
RL   Proc. Jpn. Acad. 66:37-40(1990).
XX
DR   MD5; 41056d58f18c9e16132c5853bb8772ef.
DR   EuropePMC; PMC3766826; 24058362.
XX
CC   These data kindly submitted in computer readable form by:
CC   Ichiro Uyeda
CC   Department of Botany, Faculty of Agriculture
CC   Hokkaido University
CC   Kita-ku, Kita 9, Nishi 9
CC   Sapporo 060
CC   Japan
CC   Clone pBR C3 contained the entire 3' terminal region and lacked
CC   16 nt of the 5' terminal region.   16 nt of the 5' terminal
CC   was determined by direct RNA sequence.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1800
FT                   /organism="Rice black streaked dwarf virus"
FT                   /segment="10"
FT                   /mol_type="genomic RNA"
FT                   /clone="pRB C3"
FT                   /db_xref="taxon:10990"
FT   repeat_region   18..28
FT                   /rpt_type=INVERTED
FT                   /note="putative"
FT   CDS             21..1697
FT                   /codon_start=1
FT                   /note="ORF"
FT                   /db_xref="InterPro:IPR008618"
FT                   /db_xref="UniProtKB/Swiss-Prot:P19898"
FT                   /protein_id="BAA00481.1"
FT                   /translation="MADIRLDIAPDLIHNGVPQRLSDTIILNNRPTITLLSHFNNLFHE
FT                   LNIVKAPHVASSQTTINLYIRFHLLTRLHHRLQTVETSTLPNITQFKDHIRSFFQNEHQ
FT                   PIFQTLTNNDLSEEFVGVTTFGLSLFATSKLDAEQIERVQIETLTEGNITLKPFSADGL
FT                   EVILDDSYIGVVGKIPGLEVHKFLDKCCREVPAQMGILTDEVKLLMRTGKLRIDGGYDF
FT                   NCPASTTDVTHYGGYDQFSRQMFERLNLFYNISLSIIPVSALKTVHLFEKELSVLDADK
FT                   SLLEQTWSAVASFVETWQVKSKVKADDPDEYEMTSLSTLRTNYDGTSTSSPFTDKKFID
FT                   WYIKTFSKTEKGSSLRRNELEEKSASSISTTVKKVKIHFSVQYFDDFKVNGHEKSIVVQ
FT                   THKGEMSLDYYRKIGEVLSAIWKRGKSLAVPCFDYIKLGVEKAFHLAPVIMKKYNLTID
FT                   DIINFIDKGPSYLAKLDKIDDCSLISKLIITSVLPNIIQRVYKTDPSNNVMNSVIISRA
FT                   NNLLKSDRDRVLKKALSANVSSSNTSSHEHTQKIVLNKVTR"
FT   repeat_region   1789..1799
FT                   /rpt_type=INVERTED
FT                   /note="putative"
XX
SQ   Sequence 1800 BP; 576 A; 328 C; 325 G; 571 T; 0 other;
     agtttttttc ctcacccata atggctgaca taagactcga tatagcgccc gatcttatcc        60
     ataatggtgt accccagaga ctttccgata caataatttt aaacaaccga ccaacaatca       120
     ctctgttatc tcatttcaac aatctatttc atgaattaaa cattgtcaaa gcgccccacg       180
     ttgcatcttc ccaaactacc attaatttgt acattcgctt tcatttgctg acccgacttc       240
     accatagact gcaaaccgta gaaactagca ccttacccaa cataacacaa tttaaagacc       300
     atattcgtag tttctttcaa aatgaacacc aacctatttt tcagacacta acgaacaacg       360
     acctaagcga agaatttgta ggtgtgacta cttttggact aagcttattt gctacctcca       420
     aacttgatgc tgaacaaata gaacgtgtgc aaattgagac cttaactgaa ggaaatatta       480
     cgttgaagcc cttttccgct gatggtttag aagtcattct cgatgatagt tatattggtg       540
     tagttggcaa aattccaggt ttagaagttc ataaattttt agataaatgt tgtcgtgaag       600
     ttcctgctca aatgggaata cttactgatg aagttaaact tttgatgcgt actggtaaat       660
     taagaattga tggtggttat gatttcaatt gtcccgcaag cactacagat gttactcact       720
     acggtggtta tgaccaattt tcacgtcaaa tgttcgaacg tttaaatcta ttttataata       780
     ttagtctcag tataattccc gtttcagctt tgaaaacagt tcatttattt gaaaaagaat       840
     taagtgtttt ggatgcagat aaatctttgc tcgaacagac ctggagcgca gtagcgtcat       900
     ttgttgaaac ttggcaagtt aaatctaagg ttaaagctga tgatcccgat gaatacgaaa       960
     tgaccagttt gtccactttg cgtactaatt acgatggtac ttctacttct agtcccttta      1020
     cagataagaa attcattgac tggtatatta agactttttc caagactgag aaaggatcgt      1080
     ctttgcgtag aaatgaatta gaagagaaaa gtgccagtag catatcaact acagtaaaga      1140
     aggttaaaat tcatttctcc gttcaatatt ttgacgattt taaagttaat ggacacgaaa      1200
     aaagcattgt agttcaaact cataaaggtg aaatgtcatt agattattat cgtaaaattg      1260
     gcgaagtgtt gagcgcgatt tggaaacgtg gtaaatcttt ggctgtacct tgttttgatt      1320
     acattaaact tggcgttgaa aaagcatttc atttggcacc cgtaattatg aagaagtata      1380
     acttgacgat cgacgacatt atcaatttta ttgataaagg accttcctat ttggctaagt      1440
     tggataaaat tgatgattgt tctttaattt caaagcttat tattactagt gttttaccta      1500
     acatcattca acgtgtttat aaaaccgatc caagtaataa tgttatgaac tcagtaatta      1560
     tcagtagagc gaacaatttg ctgaaatctg acagggacag ggtattaaag aaggcacttt      1620
     ccgccaacgt ttcttcctcc aacacatcta gtcatgagca tacacagaag atagtattaa      1680
     ataaagtaac aagatgacca ctgggagtac atcattagtg cgactagttc agtgctgtgc      1740
     gatcttcagt tcattatcga tgccgagtga cgacggctag ggggaaattc agctattgtc      1800
//