ID D00595; SV 1; linear; genomic RNA; STD; VRL; 2241 BP. XX AC D00595; XX DT 19-JUL-1990 (Rel. 24, Created) DT 07-DEC-2007 (Rel. 94, Last updated, Version 7) XX DE Papaya ringspot virus (strain P) gene for polyprotein precursor, partial DE cds (nuclear inclusion protein and coat protein region). XX KW coat protein; NIb protein; nuclear inclusion protein. XX OS Papaya ringspot virus OC Viruses; Riboviria; Potyviridae; Potyvirus. XX RN [1] RP 1-2241 RX PUBMED; 2303800. RA Quemada H., L'Hostis B., Gonsalves D., Reardon I.M., Heinrikson R., RA Hiebert E.L., Sieu L.C., Slightom J.L.; RT "The nucleotide sequences of the 3'-terminal regions of papaya ringspot RT virus strains W and P"; RL J. Gen. Virol. 71:203-210(1990). XX RN [2] RX DOI; 10.1094/Phyto-84-1205. RX AGRICOLA; IND20450567. RA Wang C., Bau H., Yeh S.; RT "Comparison of the nuclear inclusion b protein and coat protein genes of RT five papaya ringspot virus strains distinct in geographic origin and RT pathogenicity"; RL Phytopathology 84(10):1205-1210(1994). XX DR MD5; c73648c3eb89b4029b45bdd4b8837d14. XX CC These data kindly submitted in computer readable form by: CC Jerry L. Slightom CC The Upjohn Company CC Molecular Biology Unit 7242 CC Kalamazoo CC MI 49007 CC U.S.A. CC Confirmation of this sequence is provided by amino acid analysis CC and partial amino acid sequencing. XX FH Key Location/Qualifiers FH FT source 1..2241 FT /organism="Papaya ringspot virus" FT /strain="P" FT /mol_type="genomic RNA" FT /clone="PRV117" FT /note="811 bp upstream of HindIII site." FT /db_xref="taxon:12205" FT CDS <1..2016 FT /codon_start=1 FT /product="polyprotein precursor" FT /db_xref="GOA:P19723" FT /db_xref="InterPro:IPR001205" FT /db_xref="InterPro:IPR001592" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/Swiss-Prot:P19723" FT /protein_id="BAA00471.1" FT /translation="RCERLYEGRMGVWNGSLKAELRPAEIVLAKKTRSFTAAPLDTLLG FT AKVCVDDFNNWFYSKNMECPWTVGMTKFYKGWDEFLRKFPDGWVYCDADGSQFDSSLTP FT YLLNAVLSIRLWAMEDWDIGEQMLKNLYGEITYTPILTPDGTIVKKFKGNNSGQPSTVV FT DNTLMVLITMYYALRKAGYDTKTQEDMCVFYINGDDLCIAIHPDHEHVLDSFSSSFAEL FT GLKYDFAQRHRNKQNLWFMSHRGILIDDIYIPKLEPERIVAILEWDKSKLPEHRLEAIT FT AAMIESWGHGDLTHQIRRFYQWVLEQAPFNELAKQGRAPYVSEVGLRRLYTSERGSMDE FT LEAYIDKYFERERGDSPELLVYHESRSTDDYQLVCSNNTHVFHQSKNEAVDAGLNEKLK FT EKENQKEKEKEKQKEKEKDGASDGNDVSTSTKTGERDRDVNVGTSGTFTVPRIKSFTDK FT MVLPRIKGKTVLNLNHLLQYNPQQIDISNTRATHSQFEKWYEGVRNDYGLNDNEMQVML FT NGLMVWCIENGTSPDISGVWVMMDGETQVDYPIKPLIEHATPSFRQIMAHFSNAAEAYI FT AKRNATERYMPRYGIKRNLTDISLARYAFDFYEVNSKTPDRAREAHMQMKAAALRNTSR FT KMFGMDGSVSNKEENTERHTVEDVNRDMHSLLGMRN" FT mat_peptide <1..1152 FT /product="nuclear inclusion protein (NIb protein)" FT mat_peptide 1153..2013 FT /product="coat protein" XX SQ Sequence 2241 BP; 700 A; 403 C; 551 G; 587 T; 0 other; cgctgtgagc gtctctacga agggagaatg ggcgtctgga acggttcgct gaaggcagaa 60 ctgagaccag ctgagatagt gctcgcgaaa aagacaaggt catttacagc agcccctctt 120 gacacactat taggagccaa agtctgcgtt gatgatttca acaactggtt ttacagtaag 180 aatatggagt gcccatggac cgtcgggatg acaaaatttt acaaaggctg ggatgagttc 240 ctgaggaaat ttcctgacgg ctgggtgtac tgtgatgcag atggttccca gttcgatagc 300 tcattaacac catacttgtt gaatgctgtg ctatcaattc ggttatgggc gatggaggat 360 tgggatattg gagagcaaat gcttaagaac ttgtatgggg aaatcactta cacgccaata 420 ttgacaccag atggaacaat tgtcaagaaa ttcaagggca ataatagtgg ccaaccttcg 480 acagttgttg ataatacatt aatggtttta atcacaatgt attacgcact acggaaggct 540 ggttacgata cgaagactca agaagatatg tgtgtatttt atatcaatgg tgatgatctc 600 tgtattgcca ttcacccgga tcatgagcat gttcttgact cattctctag ttcatttgct 660 gagcttgggc ttaagtatga tttcgcacaa aggcatcgga ataaacagaa tttgtggttt 720 atgtcgcatc gaggtattct gattgatgac atttacattc caaaacttga acctgagcga 780 attgtcgcaa ttcttgaatg ggacaaatct aagcttccgg agcatcgatt ggaggcaatc 840 acagcggcaa tgatagagtc atggggtcat ggtgatctaa cacaccagat tcgcagattt 900 taccaatggg ttcttgagca agctccattc aatgagttgg cgaaacaagg aagggcccca 960 tacgtctcgg aagttggatt aagaagattg tacacaagtg aacgtggatc aatggacgaa 1020 ttagaagcgt atatagataa atactttgag cgtgagagag gagactcgcc cgaattacta 1080 gtgtaccatg aatcaaggag cactgatgat tatcaacttg tttgtagcaa caatacgcat 1140 gtgtttcatc agtccaagaa tgaagctgtg gatgctggtt tgaatgaaaa actcaaagag 1200 aaggaaaatc agaaagaaaa agaaaaagaa aaacaaaaag agaaagaaaa agacggtgct 1260 agtgacggaa atgatgtgtc aactagcaca aaaactggag agagagatag agatgtcaat 1320 gttgggacca gtggaacttt cactgttccg agaattaaat catttactga taagatggtt 1380 ctaccgagaa ttaaggggaa gactgtcctt aatttaaatc atcttcttca gtacaatccg 1440 caacaaattg acatttctaa cactcgtgcc actcattcac aatttgagaa gtggtatgag 1500 ggagtgagga atgattatgg ccttaatgat aatgaaatgc aagtgatgct aaatggtttg 1560 atggtttggt gtatcgagaa tggtacatct ccagacatat ctggtgtctg ggttatgatg 1620 gatggggaaa cccaagttga ttatccaatc aagcctttga ttgagcatgc tactccgtca 1680 tttaggcaaa ttatggctca ctttagtaac gcggcagaag catacattgc gaagagaaat 1740 gctactgaga ggtacatgcc gcggtatgga atcaagagaa atttgactga cattagcctc 1800 gctagatacg ctttcgactt ctatgaggtg aattcgaaaa cacctgatag ggctcgcgaa 1860 gctcacatgc agatgaaggc tgcagcgctg cgaaacacca gtcgcaaaat gtttggtatg 1920 gacggcagtg ttagtaacaa ggaagaaaac acggagagac acacagtgga agatgtcaat 1980 agagacatgc actctctcct gggtatgcgc aactaaatac ctgcgcttgt gtgtttgttg 2040 agtctgactc gaccctgttt caccttatgg tactatataa gcattagaat acagagtggc 2100 tgcgccaccg cttctatttt acagtgaggg tagccctccg tgcttttagt attattcgag 2160 ttctctgagt ctccatacag tgtgggtggc ccacgtgata ttcgagcctc ttagaatgag 2220 agaaaaaaaa aaaaaaaaaa a 2241 //