ID D00594; SV 1; linear; genomic RNA; STD; VRL; 2250 BP. XX AC D00594; XX DT 19-JUL-1990 (Rel. 24, Created) DT 07-DEC-2007 (Rel. 94, Last updated, Version 7) XX DE Papaya ringspot virus (strain W) gene for polyprotein precursor, partial DE cds (nuclear inclusion protein and coat protein region). XX KW coat protein; NIb protein; nuclear inclusion protein. XX OS Papaya ringspot virus OC Viruses; Riboviria; Potyviridae; Potyvirus. XX RN [1] RP 1-2250 RX PUBMED; 2303800. RA Quemada H., L'Hostis B., Gonsalves D., Reardon I.M., Heinrikson R., RA Hiebert E.L., Sieu L.C., Slightom J.L.; RT "The nucleotide sequences of the 3'-terminal regions of papaya ringspot RT virus strains W and P"; RL J. Gen. Virol. 71:203-210(1990). XX RN [2] RX DOI; 10.1094/Phyto-84-1205. RX AGRICOLA; IND20450567. RA Wang C., Bau H., Yeh S.; RT "Comparison of the nuclear inclusion b protein and coat protein genes of RT five papaya ringspot virus strains distinct in geographic origin and RT pathogenicity"; RL Phytopathology 84(10):1205-1210(1994). XX DR MD5; b624006d25cd1350d82e0f745051e0a2. XX CC These data kindly submitted in computer readable form by: CC Jerry L. Slightom CC The Upjohn Company CC Molecular Biology Unit 7242 CC Kalamazoo CC MI 49007 CC U.S.A. CC Confirmation of this sequence is provided by amino acid analysis CC and partial amino acid sequencing. XX FH Key Location/Qualifiers FH FT source 1..2250 FT /organism="Papaya ringspot virus" FT /strain="W" FT /mol_type="genomic RNA" FT /clone="W1-18, and W1-77" FT /note="824 bp upstream of HindIII site." FT /db_xref="taxon:12205" FT CDS <1..2029 FT /codon_start=2 FT /product="polyprotein precursor" FT /db_xref="GOA:P19724" FT /db_xref="InterPro:IPR001205" FT /db_xref="InterPro:IPR001592" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/Swiss-Prot:P19724" FT /protein_id="BAA00470.1" FT /translation="LVRKSCERLYEGRMGVWNGSLKAELRPAEKVLAKKTRSFTAAPLD FT TLLGAKVCVDDFNNWFYSKNMECPWTVGMTKFYKGWDEFLRKFPDGWVYCDADGSQFDS FT SLTPYLLNAVLSIRLWAMEDWDIGEQMLKNLYGEITYTPILTPDGTIVKKFKGNNSGQP FT STVVDNTLMVLITMYYALRKAGYDTKTQEDMCVFYINGDDLCIAIHPDHEHVLDSFSRS FT FAELGLKYDFTQRHRNKQNLWFMSHRGILIDDIYIPKLEPERIVAILEWDKSKLPEHRL FT EAITAAMIESWGYGDLTHQIRRFYQWVLEQAPFNELAKQGRAPYVSEVGLRRLYTSERG FT SMDELEAYIDKYFERERGDSPELLVYHESRSTDDYQLVCSNNTHVFHQSKNEAVDTGLN FT EKFKEKEKQKEKEKEKQKEKEKDDASDGNDVSTSTKTGERDRDVNVGTSGTFTVPRIKS FT FTDKMILPRIKGKSVLNLNHLLQYNPQQIDISNTRATQSQFEKWYEGVRNDYGLNDNEM FT QVMLNGLMVWCIENGTSPDISGVWVMMDGETQVDYPIKPLIEHATPSFRQIMAHFSNAA FT EAYIAKRNATERYMPRYGIKRNLTDISLARYAFDFYEVNSKTPDRAREAHMQMKAAALR FT NTSRRMFGMDGSVSNKEENTERHTVEDVNRDMHSLLGMRN" FT mat_peptide <1..1165 FT /product="nuclear inclusion protein (NIb protein)" FT mat_peptide 1166..2026 FT /product="coat protein" XX SQ Sequence 2250 BP; 715 A; 400 C; 542 G; 593 T; 0 other; tcttgtacgg aaaagctgtg agcgtctcta cgaagggaga atgggcgttt ggaacggttc 60 gttgaaggca gaactgagac cagctgaaaa agtgctcgcg aaaaagacaa ggtcatttac 120 agcagctcct cttgacacac tattaggagc caaagtctgc gttgatgatt ttaacaactg 180 gttttacagt aagaatatgg agtgcccatg gaccgtcgga atgacaaaat tttacaaagg 240 ctgggacgag ttcctgagga aatttcctga cggctgggtg tactgtgatg cagatggttc 300 ccagttcgat agctcattaa caccatactt gttgaatgct gtgctatcaa ttcggttatg 360 ggcgatggag gattgggata ttggagagca aatgcttaag aacttgtatg gggaaatcac 420 ttacacgcca atattgacac cagatggaac aattgtcaag aaattcaagg gcaataatag 480 tggccaacct tcgacagttg ttgataatac attgatggtt ttaatcacaa tgtattacgc 540 actacggaag gctggttacg atacgaagac tcaagaagat atgtgtgtat tttatatcaa 600 tggtgatgat ctctgtattg ccattcaccc ggatcatgag catgttcttg actcattctc 660 tagatcgttt gctgagcttg ggcttaagta tgatttcaca caaaggcatc ggaataaaca 720 gaatttgtgg tttatgtcgc atcgaggtat tctgattgat gacatttaca ttccaaaact 780 tgaacctgag cgaattgtcg caattcttga atgggacaaa tctaagcttc cggagcatcg 840 attggaagca atcacagcgg caatgataga gtcatggggt tatggtgatc taacacacca 900 gattcgcaga ttttaccaat gggttcttga gcaagctcca ttcaatgagt tggcgaaaca 960 aggaagggcc ccatacgtct cggaagttgg attaagaaga ttgtacacaa gtgaacgtgg 1020 atcaatggat gaattagaag cgtatataga taaatacttt gagcgtgaga gaggagactc 1080 acccgaatta ctagtgtacc atgaatcaag gagcactgat gattatcaac ttgtttgcag 1140 taacaataca catgtgtttc atcagtccaa aaatgaagct gtggatactg gtttgaatga 1200 aaaattcaaa gaaaaggaaa aacagaaaga aaaagaaaaa gaaaaacaaa aagagaaaga 1260 aaaagacgat gctagtgacg gaaatgatgt gtcaactagc acaaaaactg gagagagaga 1320 tagagatgtc aatgttggga ccagtggaac tttcactgtt ccgagaatta aatcatttac 1380 tgataagatg attctaccga gaattaaggg aaagtctgtc cttaatttaa atcacctact 1440 tcagtataat ccgcaacaaa ttgacatttc taacactcgt gccactcagt cacaatttga 1500 gaagtggtat gagggagtga ggaatgatta tggccttaat gataatgaaa tgcaagtgat 1560 gctaaatggt ttgatggttt ggtgtatcga gaatggtaca tctccagaca tatctggtgt 1620 ctgggttatg atggatgggg aaacccaagt tgattatcca atcaagcctt taattgagca 1680 tgctactccg tcatttaggc aaattatggc tcactttagt aacgcggcag aagcatacat 1740 tgcgaaaaga aatgctactg agaggtacat gccgcggtat ggaatcaaga gaaatttgac 1800 tgacattagc ctcgctagat acgctttcga cttctatgag gtgaattcga aaacacctga 1860 tagggctcgc gaagcccaca tgcagatgaa ggctgcagca ctgcgaaaca ctagtcgcag 1920 aatgtttggt atggacggca gtgttagtaa caaggaagaa aacacggaga gacacacagt 1980 ggaagacgtc aatagagaca tgcactctct cctgggtatg cgcaactaaa tacttgcgct 2040 tgtgtgtttg tcgagcttga ctcgaccctg tttcacctta tagtactata taagcattag 2100 aatacagtgt ggctgcgcca ccgcttctat tttacagtga gggtagccct ccgtgctttt 2160 agtattattc gagttctctg agtctccata cagtgtgggt ggcccacgtg ctattcgagc 2220 ctcttagaat gagagaaaaa aaaaaaaaaa 2250 //