ID   D00463; SV 1; linear; genomic RNA; STD; VRL; 1267 BP.
XX
AC   D00463;
XX
DT   05-MAR-1991 (Rel. 27, Created)
DT   10-JUL-2007 (Rel. 92, Last updated, Version 5)
XX
DE   Cucumber mosaic virus gene for coat protein, complete cds, strain:WL.
XX
KW   .
XX
OS   Cucumber mosaic virus (cucumber mosaic cucumovirus)
OC   Viruses; Riboviria; Bromoviridae; Cucumovirus.
XX
RN   [1]
RP   1-1267
RX   PUBMED; 2732712.
RA   Quemada H., Kearney C., Gonsalves D., Slightom J.L.;
RT   "Nucleotide sequences of the coat protein genes and flanking regions of
RT   cucumber mosaic virus strains C and WL RNA 3";
RL   J. Gen. Virol. 70:1065-1073(1989).
XX
DR   MD5; 3386828f311eb4169468c9c645c32479.
DR   EuropePMC; PMC112760; 10400773.
DR   RFAM; RF01084; TLS-PK3.
XX
CC   Submitted in computer readable form by H.D. Quemada on 15-Aug-1989.
CC   In <J. Gen. Virol. 70, 1065-1073 (1989)>, they compare these
CC   sequences of C and WL strains to those published for other
CC   cucumber mosaic virus strains, and present evidence that C strain
CC   belongs to the WT group while WL strain belongs to the S group.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1267
FT                   /organism="Cucumber mosaic virus"
FT                   /strain="WL"
FT                   /mol_type="genomic RNA"
FT                   /note="588 bp upstream of HindIII site."
FT                   /note="clones pWL3.4.1, pWL3.4.2 and pWL3Z8.1"
FT                   /note="propagated in Nicotiana tabacum cv. Xanthi"
FT                   /db_xref="taxon:12305"
FT   misc_feature    232
FT                   /note="start site of subgenomic RNA 4 (putative)"
FT   CDS             285..941
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:P24147"
FT                   /db_xref="InterPro:IPR000247"
FT                   /db_xref="InterPro:IPR023800"
FT                   /db_xref="InterPro:IPR037137"
FT                   /db_xref="UniProtKB/Swiss-Prot:P24147"
FT                   /protein_id="BAA00358.1"
FT                   /translation="MDKSGSPNASRTSRRRRPRRGSRSASGADAGLRALTQQMLKLNRT
FT                   LAIGRPTLNHPTFVGSESCKPGYTFTSITLKPPEIEKGSYFGRRLSLPDSVTDYDKKLV
FT                   SRIQIRVNPLPKFDSTVWVTVRKVPSSSDLSVAAISAMFGDGNSPVLVYQYAASGVQAN
FT                   NKLLYDLSEMRADIGDMRKYAVLVYSKDDKLEKDEIALHVDVEHQRIPISRMLPT"
XX
SQ   Sequence 1267 BP; 282 A; 303 C; 299 G; 383 T; 0 other;
     tgttttgtta cgttgtatcc atgtatatat atatcacgtt tatcttccgt atgtaaatac        60
     atgtgagtct agagttccgt gtgagttgta acggtagaca tctgtgacgc gaagccgctt       120
     gaagacttcc catctggggt tagtaagtcc acatcacagt tttaagattc aattcctttt       180
     gctccctgtt gggcccctta ctttctcatg gatgcctctc cgcgagttag cgtttagttg       240
     ttcacctgag tcgtgtgttt tgtattttgc gtcttagtgt gcctatggac aaatctggat       300
     ctcccaatgc tagtagaacc tcccggcgtc gtcgcccgcg tagaggttct cggtccgctt       360
     ctggtgcgga tgcagggttg cgtgctttga ctcagcagat gctgaaactc aatagaaccc       420
     tcgccattgg tcgtcccact cttaaccacc caaccttcgt gggtagtgaa agctgtaaac       480
     ccggttacac tttcacatct attaccctga aaccgcctga aattgagaaa ggttcatatt       540
     ttggtagaag gttgtctttg ccagattcag tcacggacta tgataagaag cttgtttcgc       600
     gcattcaaat cagggttaat cctttgccga aatttgattc taccgtgtgg gttacagttc       660
     ggaaagtacc ttcatcatcc gatctttccg tcgccgccat ctctgctatg tttggcgatg       720
     gtaattcacc ggttttggtt tatcagtatg ctgcgtccgg agttcaggcc aacaataagt       780
     tactttatga cctgtccgag atgcgtgctg atatcggcga catgcgtaag tacgccgtcc       840
     tggtttactc gaaagacgat aaactagaga aggacgagat tgcacttcat gtcgacgtcg       900
     agcatcaacg aattcctatc tcacggatgc tcccgactta gtccgtgtgt ttaccggcgt       960
     ccgagaacgt taaactacac tctcaatcgc gagtgctgac ttggtagtat tgcttcaaac      1020
     tgcctgaagt ccctaaacgt gttgttgcgc ggggaacggg tgtccatcca gcttacggct      1080
     aaaatggtcg tgtctttcac acgccgatgt cttacaagat gtcgagatac ccttgaaatc      1140
     atctcctaga tttcttcgga agggcttcgt gagaagctcg tgcacggtaa tacacttgat      1200
     attaccaaga gtgcgggtat cgcctgtggt tttccacagg ttctccaggt tctccataag      1260
     gagacca                                                                1267
//