ID   D00442; SV 1; linear; genomic RNA; STD; VRL; 1114 BP.
XX
AC   D00442;
XX
DT   05-MAR-1991 (Rel. 27, Created)
DT   07-JUL-2003 (Rel. 76, Last updated, Version 5)
XX
DE   Grapevine fanleaf virus satellite RNA (RNA3), complete cds.
XX
KW   .
XX
OS   Grapevine fanleaf virus satellite RNA
OC   Viruses; Satellites; RNA satellites; Single stranded RNA satellites;
OC   Large single stranded RNA satellites.
XX
RN   [1]
RP   1-1114
RX   PUBMED; 2471799.
RA   Fuchs M., Pinck M., Serghini M.A., Ravelonandro M., Walter B., Pinck L.;
RT   "The nucleotide sequence of satellite RNA in grapevine fanleaf virus,
RT   strain F13";
RL   J. Gen. Virol. 70:955-962(1989).
XX
DR   MD5; 30185a84016a55d365666d85f3bbc3da.
XX
CC   The satellite RNA has a polyadenylated 3' end, and probably a
CC   protein (VPg) linked to the 5' terminus, and produces 39K protein
CC   in a wheatgerm translation system.  Furthermore there is the weaker
CC   upper band.  It may be readthrough product of 39K protein.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1114
FT                   /organism="Grapevine fanleaf virus satellite RNA"
FT                   /mol_type="genomic RNA"
FT                   /clone="pA4 and pA5"
FT                   /note="5' end of satellite RNA."
FT                   /note="satellite RNA (RNA3)"
FT                   /db_xref="taxon:141860"
FT   misc_feature    3..10
FT                   /note="consensus sequence at the 5' end of nepovirus RNAs"
FT   CDS             15..1040
FT                   /codon_start=1
FT                   /note="39K product, P3"
FT                   /db_xref="UniProtKB/Swiss-Prot:P17768"
FT                   /protein_id="BAA00343.1"
FT                   /translation="MDSYVTVDPSFHSPRISLEILVPTKYAKLFTLKQLSRMLALSCKH
FT                   RARQAANPVSKRTSRDRNGSKTMGQGPSAVAPQVSKGHNQQVDGGVCLAPVKSKRAVRR
FT                   EKRRTAAKKATNKAKTETKLVKKGGSSIHAPKAPKRTSYLSSLLSSPSGAKAKMGALSK
FT                   PPQTKNAPDANEGGFTLTAITPAECRAEARRRFHPITGSSRGPYGFCTRSREGCGVCAD
FT                   CVEKKAHLDFNRSFDTIGTSRVIRVDSMMEEVAEDLASPSVLEPSGFWAPAEKQAPSGE
FT                   GHSRRRCDVVTLARVTPVLRMLRKVDPTLVDNRLLWEAAFRTVFPQRKCVYPHGCFCDR
FT                   G"
FT   variation       720
FT                   /note="t in clone pA5; c in clone pA4"
XX
SQ   Sequence 1114 BP; 246 A; 295 C; 313 G; 260 T; 0 other;
     tatgaaaaat ttctatggac tcttacgtta ccgtggatcc atcttttcac tctcccagaa        60
     tctcacttga gattctggtc cctaccaagt atgcgaagct gtttaccctt aagcagctct       120
     ctcgcatgct tgcattgtcg tgtaagcacc gtgcacggca agccgctaac ccggtaagca       180
     aacggacctc ccgagaccga aatgggagta aaacaatggg tcagggtcct tctgctgtgg       240
     ccccgcaagt gtcgaaggga cacaatcagc aagtagatgg aggggtttgt ctagccccgg       300
     tgaagtcaaa gcgtgcggta cggcgtgaaa agcgccgtac tgccgctaag aaggccacta       360
     ataaggccaa gaccgagacc aaactcgtta aaaagggtgg gtctagtatc cacgccccaa       420
     aggcaccgaa gcggacgtcg tatttgtcta gtctgctttc gagtccttct ggggcgaaag       480
     ccaaaatggg ggctctgagc aagccccccc aaacaaaaaa tgctcccgac gccaacgagg       540
     gtggtttcac cctcactgct atcacaccgg ctgagtgccg ggcggaagct aggcgcagat       600
     tccaccccat cacaggatcc tctcgtggtc cttatgggtt ctgcacccgc tcccgtgagg       660
     gttgtggcgt gtgtgccgat tgtgtggaaa agaaggcaca cctggacttc aaccggagtt       720
     ttgacactat tggcacttcg cgtgtcattc gtgtcgactc gatgatggaa gaagtggccg       780
     aagacttggc cagccctagt gtcctagaac cctctgggtt ctgggctcct gctgaaaagc       840
     aggctccttc tggagagggg cattcccgta gaaggtgcga cgtggtgaca ctcgcacgcg       900
     taactccggt tctccggatg ttgcgtaagg tcgatcccac tcttgtggac aaccgacttt       960
     tatgggaggc cgcgtttagg acggtctttc ctcagcgcaa gtgcgtgtat ccccacggtt      1020
     gcttctgtga ccgtgggtag ggaagattgc agcgggacat cgtttgttta tagtctggcg      1080
     taagctggga ttttggttgc tcattagcca actc                                  1114
//