ID D00344; SV 1; linear; genomic RNA; STD; VRL; 6435 BP. XX AC D00344; XX DT 11-APR-1990 (Rel. 23, Created) DT 07-JUL-2003 (Rel. 76, Last updated, Version 6) XX DE Potato virus X genes for 166K protein, 25K protein, 12K protein, 8K DE protein, coat protein. XX KW . XX OS Potato virus X OC Viruses; Riboviria; Tymovirales; Alphaflexiviridae; Potexvirus. XX RN [1] RP 1-6435 RX PUBMED; 3404114. RA Huisman M.J., Linthorst H.J., Bol J.F., Cornelissen B.J.; RT "The complete nucleotide sequence of potato virus X and its homologies at RT the amino acid level with various plus-stranded RNA viruses"; RL J. Gen. Virol. 69:1789-1798(1988). XX DR MD5; c0037f50e27b2b5065c0350eb9a98d41. DR EuropePMC; PMC1190219; 16014172. DR EuropePMC; PMC5328226; 28118086. DR EuropePMC; PMC5377869; 28466060. DR RFAM; RF00184; PVX_3. XX CC Submitted in computer readable form by M. Huisman on 28-DEC-1988. CC The ORF 1 product contained domains of homology with the tabacco CC mosaic virus 126K and 183K products. The ORFs 2 and 3 products CC showed homologies with the barley stripe mosaic virus 58K and 14K CC proteins, the beet necrotic yellow vein virus 42K and 13K products CC and the white clover mosaic virus 26K and 13K products, CC respectively. XX FH Key Location/Qualifiers FH FT source 1..6435 FT /organism="Potato virus X" FT /strain="X3" FT /mol_type="genomic RNA" FT /note="5'end of genomic RNA" FT /note="clone pX[25,51,633]" FT /note="isolated from Nicotina tabacum cv" FT /db_xref="taxon:12183" FT CDS 85..4455 FT /codon_start=1 FT /product="166K protein" FT /db_xref="GOA:P17779" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/Swiss-Prot:P17779" FT /protein_id="BAA00249.1" FT /translation="MAKVREVYQSFTDSTTKTLIQDEAYRNIRPIMEKHKLANPYAQTV FT EAANDLEGFGIATNPYSIELHTHAAAKTIENKLLEVLGSILPQEPVTFMFLKPRKLNYM FT RRNPRIKDIFHNVAIEPRDVARYPKETIIDKLTEITTETAYISDTLHFLDPSYIVETFQ FT NCPKLQTLYATLVLPVEAAFKMESTHPNIYSLKYFGDGFQYIPGNHGGGAYHHEFAHLQ FT WLKVGKIKWRDPKDSFLGHLNYTTEQVEMHTVTVQLQESFAANHLYCIRRGDLLTPEVR FT TFGQPDRYVIPPQIFLPKVHNCKKPILKKTMMQLFLYVRTVKVAKNCDIFAKVRQLIKS FT SDLDKYSAVELVYLVSYMEFLADLQATTCFSDTLSGGLLTKTLAPVRAWIQEKKMQLFG FT LEDYAKLVKAVDFHPVDFSFKVETWDFRFHPLQAWKAFRPREVSDVEEMESLFSDGDLL FT DCFTRMPAYAVNAEEDLATIRKTPEMDVGQEVKEPAGDRNQYSNPAETFLNKLHRKHSR FT EVKHQAVKKAKRLAEIQESMRAEGEAEPNETSGGMGAIPSNAELPGTSDARQELTLPTT FT KPVPARWEDASFTDSSVEEEQVRLLGEEAVKTATQQVIEGLPWKHWIPQLNAVGFKALL FT IQRDRSGTMIMPITEMVSGLEKEDFPEGTPKELARELLVMNRSPATIPLDLLRARDYGS FT DVKNKRIGAITKTQATSWGEYLTGKIESLTERKVATCVIHGAGGSGKSHAIQKALREIG FT KGSDITVVLPTNELRLDWSKKVPNTEPYMFKTYEKALIGGTGSIVIFDDYSKLPPGYIE FT ALVCFYSKIKLIILTGDSRQSVYHETAEDASIRHLGPATEYFSKYCRYYLNATHRNKKD FT LANMLGVYSERTGVTEISMSAEFLEGIPTLVPSDEKRKLYMGTGRNDTFTYAGCQGLTK FT PKVQIVLDHNTQVCSANVMYTALSRATDRIHFVNTSANSSAFWEKLDSTPYLKTFLSVV FT REQALREYEPAEAEPIQEPEPQTHMCVENEESVLEEYKEELLEKFDREIHSESHGHSNC FT VQTEDTTIQLFSHQQAKDETLLWATIDARLKTSNQEANFREFLSKKDIGDVLFLNYQKA FT MGLPKERIPFSQEVWEACAHEVQSKYLSKSKCNLINGTVRQSPDFDENKIMVFLKSQWV FT TKVEKLGLPKIKPGQTIAAFYQQTVMLFGTMARYMRWFRQAFQPKEVFINCETTPEDMS FT VWALNNWNFSRPSLANDYTAFDQSQDGAMLQFEVLKAKHHCIPEEIIQAYIDIKTNAQI FT FLGTLSIMRLTGEGPTFDANTECNIAYTHTKFDIPAGTAQVYAGDDSALDCVPEVKHSF FT HRLEDKLLLKSKPVITQQKKGSWPEFCGWLITPKGVMKDPIKLHVSLKLAEAKGELKKC FT QDSYEIDLSYAYDHKDSLHDLFDEKQCQAHTLTCRTLIKSGRGTVSLPRLRNFL" FT CDS 4486..5166 FT /codon_start=1 FT /product="25K protein" FT /db_xref="GOA:P17780" FT /db_xref="InterPro:IPR027351" FT /db_xref="UniProtKB/Swiss-Prot:P17780" FT /protein_id="BAA00250.1" FT /translation="MDILISSLKSLGYSRTSKSLDSGPLVVHAVAGAGKSTALRKLILR FT HPTFTVHTLGVPDKVSIRTRGIQKPGPIPEGNFAILDEYTLDNTTRNSYQALFADPYQA FT PEFSLEPHFYLETSFRVPRKVADLIAGCGFDFETNSQEEGHLEITGIFKGPLLGKVIAI FT DEESETTLSRHGVEFVKPCQVTGLELKVVTIVSAAPIEEIGQSTAFYNAITRSKGLTYV FT RAGT" FT CDS 5147..5494 FT /codon_start=1 FT /product="12K protein" FT /db_xref="GOA:P0C786" FT /db_xref="InterPro:IPR001896" FT /db_xref="UniProtKB/Swiss-Prot:P0C786" FT /protein_id="BAA00251.1" FT /translation="MSAQGHRLTAPVNSEKVYIVLGLSFALVSITFLLSRNSLPHVGDN FT IHSLPHGGAYRDGTKAILYNSPNLGSRVSLHNGKNAAFAAVLLLTLLIYGSKYISQRNH FT TCACGNNHSSH" FT CDS 5427..5639 FT /codon_start=1 FT /product="8K protein" FT /db_xref="GOA:P17781" FT /db_xref="InterPro:IPR003411" FT /db_xref="UniProtKB/Swiss-Prot:P17781" FT /protein_id="BAA00252.1" FT /translation="MEVNTYLNAIILVLVVTIIAVISTSLVRTEPCVIKITGESITVLA FT CKLDAETIKAIADLKPLSVERLSFH" FT CDS 5650..6363 FT /codon_start=1 FT /product="coat protein" FT /db_xref="GOA:P17782" FT /db_xref="InterPro:IPR000052" FT /db_xref="UniProtKB/Swiss-Prot:P17782" FT /protein_id="BAA00253.1" FT /translation="MSAPASTTQATGSTTSTTTKTAGATPATASGLFTIPDGDFFSTAR FT AIVASNAVATNEDLSKIEAIWKDMKVPTDTMAQAAWDLVRHCADVGSSAQTEMIDTGPY FT SNGISRARLAAAIKEVCTLRQFCMKYAPVVWNWMLTNNSPPANWQAQGFKPEHKFAAFD FT FFNGVTNPAAIMPKEGLIRPPSEAEMNAAQTAAFVKITKARAQSNDFASLDAAVTRGRI FT TGTTTAEAVVTLPPP" XX SQ Sequence 6435 BP; 1973 A; 1522 C; 1476 G; 1464 T; 0 other; gaaaactaaa ccatacacca ccaacacaac caaacccacc acgcccaatt gttacacacc 60 cgcttggaaa agcaagtcta acaaatggcc aaagtgcgcg aggtttacca atcctttaca 120 gactccacca caaaaactct catccaagat gaggcttata gaaatattcg ccccatcatg 180 gaaaaacaca aactagctaa cccttacgct caaacggttg aagcggctaa tgatctagag 240 gggttcggca tagccaccaa tccctatagc attgaattgc atacacatgc agccgctaag 300 accatagaga ataaacttct agaggtgctt ggttccatcc taccacaaga acctgttaca 360 tttatgttcc ttaaacccag gaagctaaac tacatgagaa gaaacccgcg gatcaaggac 420 attttccaca atgttgccat tgaaccgaga gacgtagcaa ggtaccccaa ggaaacaata 480 attgacaaac tcacagagat cacaacggaa acagcataca ttagtgatac tctgcacttc 540 ttggatccga gctacatagt ggagacattc caaaactgcc caaaactgca aacattgtat 600 gcgaccttag ttctccccgt tgaggcagcc ttcaaaatgg aaagcactca cccgaacata 660 tacagcctca aatacttcgg agatggtttc cagtatatac caggcaacca tggtggtggg 720 gcataccatc atgaattcgc tcatttacaa tggctcaaag tgggaaagat caagtggagg 780 gaccccaagg atagctttct cggacatctc aattacacga ctgagcaggt tgagatgcac 840 acagtgacag tacagttgca ggaatcgttt gcggcaaacc acttgtactg cattaggaga 900 ggagacttgc tcacaccgga ggtgcgtact ttcggccaac ctgacaggta tgtgattcca 960 ccacagatct ttctcccaaa agttcacaac tgcaagaagc cgattcttaa gaaaactatg 1020 atgcagctct tcttgtatgt taggacagtc aaggtcgcaa aaaattgtga catctttgcc 1080 aaagtcagac aattaattaa atcatctgac ttagacaaat attctgctgt ggaactggtt 1140 tacttagtaa gctatatgga gttccttgcc gatttacaag ctaccacctg cttctcagac 1200 acactctctg gtggcttgct aacaaagacc cttgcaccgg tgagggcttg gatacaagaa 1260 aagaagatgc agctgtttgg tcttgaggac tacgcgaagt tagtcaaagc agttgatttc 1320 cacccggtgg atttttcttt caaagtggaa acttgggact tcagattcca ccccttgcaa 1380 gcgtggaaag ccttccgacc aagggaagtg tcggatgtag aggaaatgga aagtttgttc 1440 tcagatgggg acctgcttga ttgcttcaca agaatgccag cttatgcagt aaacgcagag 1500 gaagatttag ctacaatcag gaaaacgccc gagatggatg tcggtcaaga agttaaagag 1560 cctgcaggag acagaaatca atactcaaac cctgcagaaa ctttcctcaa caagctccac 1620 aggaaacaca gtagggaggt gaaacaccag gccgtaaaga aagctaaacg cctagctgaa 1680 atccaggagt ccatgagagc tgaaggtgag gccgaaccaa atgagacgag cgggggcatg 1740 ggggcaatac ccagcaacgc cgaacttccc ggcacgagtg atgccagaca agaactcaca 1800 ctcccaacca ctaaacctgt tcctgcaagg tgggaagatg cttcattcac agattctagt 1860 gtggaagagg agcaggtaag actccttgga gaagaagcag tgaaaacagc gacgcagcaa 1920 gtcatcgaag gactcccttg gaaacactgg attcctcaac taaatgctgt tggattcaag 1980 gcgctgttaa tccagaggga taggagtgga acgatgatca tgcccatcac agaaatggtc 2040 tccgggttgg aaaaagagga cttcccggaa ggaactccaa aagagttggc acgagaatta 2100 ctcgttatga acagaagccc tgccaccatc cctttggacc tgcttagagc cagagactac 2160 ggcagtgatg taaagaacaa gagaattggt gccatcacaa agacacaggc aacgagttgg 2220 ggcgagtact taacaggaaa gatagaaagc ctgactgaga ggaaagttgc gacttgtgtc 2280 attcatggag ctggaggctc tgggaaaagt catgccatcc agaaggcact gagagaaatt 2340 ggcaagggct cggacatcac tgtagtcctg ccgaccaatg aactgcggct agattggagt 2400 aagaaggtgc ctaacactga accctatatg ttcaagacct acgaaaaggc gttaattggg 2460 ggaacaggca gcatagtcat ctttgacgat tactcaaaac ttcctcccgg ttacatagaa 2520 gccttagtct gtttctactc caaaatcaag ctaatcattc taacaggaga tagcagacag 2580 agcgtctacc atgaaactgc tgaggacgcc tccatcaggc atttggggcc agcgacagag 2640 tacttctcaa aatactgccg atactatctc aatgctacac accgcaacaa gaaagacctt 2700 gcgaacatgc ttggtgtcta cagtgagaga acgggagtca ctgaaatcag catgagcgcc 2760 gagtttttag aaggaatccc aactttagta ccctcggatg agaagagaaa gctgtacatg 2820 ggcaccggga ggaatgacac attcacatac gctggatgcc aggggctaac taagccgaaa 2880 gtacaaatag tgttggacca caacacccaa gtgtgtagtg cgaatgtgat gtacacggca 2940 ctttctagag ccaccgatag gattcacttc gtgaacacaa gtgcaaactc ctcggccttc 3000 tgggaaaagt tggacagcac cccttacctc aagactttcc tatcagtggt gagagaacaa 3060 gcactcaggg agtatgagcc ggcagaggca gagccaattc aagagcctga gccccagaca 3120 cacatgtgtg tcgagaatga ggagtccgtg ctagaagagt acaaagagga actcttggaa 3180 aagtttgaca gagagataca ctctgaatcc catggtcatt caaactgtgt ccaaactgaa 3240 gacacaacca ttcagttgtt ttcgcatcaa caagcaaaag atgagaccct cctctgggcg 3300 accatagatg cgcggctcaa gactagcaat caagaggcaa acttccgaga attcctgagc 3360 aagaaggaca ttggggacgt tctgttttta aactaccaaa aagctatggg tttgcccaaa 3420 gagcgtattc ctttttccca agaggtctgg gaagcttgtg cccacgaagt acaaagcaag 3480 tacctcagta agtcaaagtg caacttgatc aatgggactg tgagacagag cccagacttc 3540 gatgaaaaca agattatggt attcctcaag tcgcagtggg tcacaaaggt ggaaaaacta 3600 ggtctaccca agattaagcc aggtcaaacc atagcagcct tttaccagca gactgtgatg 3660 ctttttggaa ctatggctag gtacatgcga tggttcagac aggctttcca gccaaaagaa 3720 gtcttcataa actgtgagac tacgccagaa gacatgtctg tatgggcctt gaacaactgg 3780 aatttcagca gacctagctt agctaatgac tacacagctt tcgaccagtc tcaggatgga 3840 gctatgctgc aatttgaggt gctcaaagcc aagcaccact gcataccaga ggaaatcatc 3900 caagcataca tagacattaa gaccaatgca cagattttcc taggcacatt atcgattatg 3960 cgcctgactg gtgagggtcc cacttttgat gcaaacactg agtgcaacat agcttacacc 4020 cacacaaagt ttgacatccc agccggaact gctcaagttt atgcaggaga cgactccgca 4080 ctggattgcg ttccagaagt gaagcatagt ttccacaggc ttgaagacaa attactcctc 4140 aagtcaaagc ctgtaatcac gcagcaaaag aaaggcagtt ggcctgagtt ttgtggttgg 4200 ctgatcacac caaaaggggt aatgaaagac ccaattaagc tccatgttag cttaaaattg 4260 gccgaagcta agggtgaact caagaaatgt caagattcct atgaaattga tctgagttat 4320 gcctatgacc acaaggactc tctgcatgac ttgttcgatg agaaacagtg tcaggcacat 4380 acactcactt gcaggacact aatcaagtca gggagaggca ctgtctcact tccccgcctc 4440 agaaactttc tttaaccgtt aatttacctt atagatttga ataagatgga tattctcatc 4500 agtagtttga aaagtttagg ttattctagg acttctaaat ctttagattc aggacctttg 4560 gtagtacatg cagtagccgg agcaggtaag tccacagccc taaggaagtt gatcctcaga 4620 cacccaacat tcaccgtgca tacactcggt gtccctgaca aggtgagtat cagaactaga 4680 ggcatacaga agccaggacc tattcctgag ggcaatttcg caatcctcga tgagtatact 4740 ttggacaaca ccacaaggaa ctcataccag gcactttttg ctgaccctta tcaggcacct 4800 gagtttagcc tagagcccca cttctacttg gaaacatcat ttcgagttcc gaggaaagtg 4860 gcagatttga tagctggctg tggcttcgat ttcgagacta actcacagga agaagggcat 4920 ttagagatca ctggcatatt caaagggccc ctacttggaa aggtgatagc cattgatgag 4980 gagtctgaga caacactgtc caggcatggt gttgagtttg ttaagccctg ccaagtgact 5040 ggacttgagt tgaaagtagt cactattgtg tctgccgcac caatagagga aattggccag 5100 tccacagctt tctacaacgc tatcaccagg tcaaagggat tgacatatgt ccgcgcaggg 5160 acatagactg accgctccgg tcaattctga aaaagtgtac atagtattag gtctatcatt 5220 tgctttagtt tcaattactt tcctgctttc tagaaatagt ttgccccacg tcggtgacaa 5280 cattcacagc ttgccacacg gaggagctta cagagacggc accaaagcaa tcttgtacaa 5340 ctccccaaat ctagggtcac gagtgagtct acacaacgga aagaacgcag catttgctgc 5400 cgttttgcta ctgactttgc tgatctatgg aagtaaatac atatctcaac gcaatcatac 5460 ttgtgcttgt ggtaacaatc atagcagtca ttagtacttc cttagtgagg actgaacctt 5520 gtgtcatcaa gattactggg gaatcaatca cagtgttggc ttgcaaatta gatgcagaaa 5580 ctataaaagc cattgccgat ctcaagccac tctccgttga acggttaagt ttccattgat 5640 actcgaaaga tgtcagcacc agctagcaca acacaggcca cagggtcaac tacctcaact 5700 accacgaaaa ctgcaggcgc aactcctgcc acagcttcag gcctgttcac catcccggat 5760 ggggatttct ttagtacagc tcgtgccata gtagccagca atgctgtcgc aacaaatgag 5820 gacctcagca agattgaggc tatttggaag gacatgaagg tgcccacaga cactatggca 5880 caggctgctt gggacttagt cagacactgt gctgatgtgg gatcatctgc tcaaacagaa 5940 atgatagata caggtcctta ttccaacggc atcagcagag ctagactggc agcagcaatc 6000 aaagaggtgt gcacacttag gcaattttgc atgaagtatg ctccagtggt atggaactgg 6060 atgttaacta acaacagtcc acctgctaac tggcaagcac aaggtttcaa gcctgagcac 6120 aaattcgctg cattcgactt cttcaatgga gtcaccaacc cagctgccat catgcccaaa 6180 gaggggctca tccggccacc gtctgaagct gaaatgaatg ctgcccaaac tgctgctttt 6240 gtgaagatta caaaggccag ggcacaatcc aacgactttg ccagcctaga tgcagctgtc 6300 actcgaggtc gtatcactgg aacaacaacc gctgaggctg ttgtcactct accaccacca 6360 taactacgtc tacataaccg acgcctaccc cagtttcata gtattttctg gtttgattgt 6420 atgaataata taaat 6435 //