ID   AY995214; SV 2; linear; genomic RNA; STD; VRL; 1708 BP.
XX
AC   AY995214;
XX
DT   20-APR-2005 (Rel. 83, Created)
DT   15-AUG-2006 (Rel. 88, Last updated, Version 2)
XX
DE   Turnip mosaic virus polyprotein gene, partial cds.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1708
RA   Wei T., Pearson M.N.;
RT   ;
RL   Submitted (31-MAR-2005) to the INSDC.
RL   School of Biological Sciences, The University of Auckland, Private Bag
RL   92019, Auckland, New Zealand
XX
RN   [2]
RC   Sequence update by submitter
RP   1-1708
RA   Wei T., Pearson M.N.;
RT   ;
RL   Submitted (14-AUG-2006) to the INSDC.
RL   School of Biological Sciences, The University of Auckland, Private Bag
RL   92019, Auckland, New Zealand
XX
DR   MD5; 32176da06e5c6d3440c3ce08140bd2cc.
XX
CC   On Aug 14, 2006 this sequence version replaced gi:62633081.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1708
FT                   /organism="Turnip mosaic virus"
FT                   /mol_type="genomic RNA"
FT                   /country="New Zealand"
FT                   /db_xref="taxon:12230"
FT   CDS             <1..1482
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /note="Nib-CP"
FT                   /db_xref="GOA:Q52NV8"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:Q52NV8"
FT                   /protein_id="AAX89505.2"
FT                   /translation="PSTVVDNTLMVILAVNYSLKKSGIPSELRDSIIRFFVNGDDLLLS
FT                   VHPEYEYILDTMADNFRELGLKYTFDSRTKEKGDLWFMSHQGHRREGIWIPKLEPERIV
FT                   SILEWDRSKEPCHRLEAICAAMIESWGYDKLTHEIRKFYAWMIEQAPFSSLAQEGKAPY
FT                   IAETALRKLYLDKEPAQEDLTQYLQAIFEDYEDGAEVCVYHQAGETLDAGLTEEQKQAE
FT                   KEKKEREKAEKERERQKQLALKKGKDVAQEEGKRDKEVNAGTSGTFSVPRLKSLTSKMR
FT                   VPRYEKRVALNLDHLILYTPEQTDLSNTRSTRKQFDTWFEGVMADYELTEDKMQIILNG
FT                   LMVWCIENGTSPNINGMWVMMDGDDQVEFPIKPLIDHAKPTFRQIMAHFSDVAEAYIEK
FT                   RNQDRPYMPRYGLQRNLTDMSLARYAFDFYEMTSRTPIRAREAHIQMKAAALRGANNNL
FT                   FGLDGNVGTTVENTERHTTEDVNRNMHNLLGVQGL"
FT   mat_peptide     1..615
FT                   /product="nuclear inclusion body"
FT   mat_peptide     616..1479
FT                   /product="coat protein"
FT   3'UTR           1483..1708
XX
SQ   Sequence 1708 BP; 541 A; 347 C; 437 G; 383 T; 0 other;
     ccatcgactg ttgtagacaa cacgctcatg gtcatattgg cagtcaacta ttccctcaag        60
     aaaagtggaa ttccaagcga gttgcgcgac agcatcatca gattcttcgt caacggagat       120
     gatttactgc taagcgtaca cccagagtat gagtatatcc ttgacactat ggcagacaac       180
     tttcgtgagc tgggcctgaa gtacactttc gactcaagaa ccaaggaaaa aggagatctc       240
     tggtttatgt cgcatcaagg gcacagaaga gaagggatct ggattcctaa gcttgaacca       300
     gagcgaatag tatcgatcct agaatgggat cggtcaaaag agccatgcca tcgactagag       360
     gcaatctgcg cagcaatgat tgagtcgtgg ggatacgaca agttaactca cgagatacgc       420
     aagttttacg cgtggatgat tgaacaagct ccatttagct ccttagcaca agaaggaaaa       480
     gctccttaca tagcggaaac agcgctgagg aagctctacc ttgacaagga accagctcaa       540
     gaggatctca cccagtattt acaagcaatc tttgaggatt atgaagatgg tgctgaggtt       600
     tgtgtctatc accaggcagg tgaaacgctc gatgcaggct tgacagaaga gcaaaagcag       660
     gcagagaagg agaagaaaga gagagagaag gcagaaaagg agcgagagag gcagaagcag       720
     ttggcactca agaaaggcaa agatgtcgca caagaagagg gaaaacgcga caaggaagta       780
     aacgctggaa cctctggaac tttcagtgta cccagactca agagtctgac aagcaagatg       840
     cgcgtgccaa gatatgagaa aagagtggct ctaaacctcg accatctaat cctatacacg       900
     ccggagcaga cggatctatc caacacacgt tcaacgcgaa agcagtttga cacatggttt       960
     gaaggtgtga tggctgacta tgaactgacg gaggacaaaa tgcaaatcat tctcaatggt      1020
     ctaatggtct ggtgcattga gaacggaacc tccccgaaca taaacggaat gtgggtgatg      1080
     atggacggcg atgatcaggt ggaattcccg atcaaaccgc tcattgacca cgccaaaccc      1140
     acatttaggc agataatggc ccatttcagt gacgtagctg aagcgtacat tgaaaagcgt      1200
     aaccaagacc gaccatacat gccacgatat ggtcttcagc gcaatttaac cgacatgagc      1260
     ttagctcgat acgcatttga tttctatgaa atgacttcta ggactccaat acgtgcgaga      1320
     gaggcacaca tccagatgaa agcagcagca ctgcgtggcg caaataacaa tttgttcggc      1380
     ttggatggaa acgttggtac aacggtagag aacacggaga ggcatacgac cgaggacgtt      1440
     aatcggaaca tgcataactt actgggcgtt caggggttat gaagttgtat gctggtagac      1500
     tataagtatt taagtttact cgttagtatt ctcgcttatg ggaaatatgt aagtttgtta      1560
     aagcagccag tgtgactttg tcatgtgtgt tgttgttact ttctgtattt tcgccgaaca      1620
     ttttattggt gttagcgcat gtggtgagga tcgtcctcga ttgccttaac atttgatagg      1680
     atgcaaggga caaaaaaaaa aaaaaaaa                                         1708
//