ID   AY974328; SV 1; linear; genomic RNA; STD; VRL; 1680 BP.
XX
AC   AY974328;
XX
DT   19-APR-2005 (Rel. 83, Created)
DT   19-APR-2005 (Rel. 83, Last updated, Version 1)
XX
DE   Omphalodes virus Y polyprotein gene, partial cds.
XX
KW   .
XX
OS   Omphalodes virus Y
OC   Viruses; Riboviria; Potyviridae; Potyvirus; unclassified Potyvirus.
XX
RN   [1]
RP   1-1680
RA   Jordan R.L., Guaragna M.A.;
RT   "Detection and Characterization of a New Potyvirus Infecting Omphalodes";
RL   Unpublished.
XX
RN   [2]
RP   1-1680
RA   Jordan R.L., Guaragna M.A.;
RT   ;
RL   Submitted (25-MAR-2005) to the INSDC.
RL   Floral & Nursery Plants Research Unit, US National Arboretum, USDA-ARS,
RL   10300 Baltimore Ave, Beltsville, MD 20705, USA
XX
DR   MD5; e7c0b50e23e4c4aa903e3b73af8cc7a1.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1680
FT                   /organism="Omphalodes virus Y"
FT                   /host="Omphalodes"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:322836"
FT   CDS             <1..1461
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /note="processed to NIb and CP at VFHQ/ASTG cleavage site"
FT                   /db_xref="GOA:Q52QS4"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:Q52QS4"
FT                   /protein_id="AAX84695.1"
FT                   /translation="STVVDNTLMVIIAMKYSLSKSGLPHELHKEICKFFVNGDDLLIGV
FT                   DPKYEYILDGMSQNFLELGLKYTFDSRTRDKGDLWFMSHKGIKVDDIWIPKLEPERIVS
FT                   ILEWDRATEPVHRLNAICAAMIEAWGYPELLHEIRKFYQWLLAQEPYATLASEGKAPYI
FT                   AEAALRKLYMDTDVEDTELLSYLRAIFEHEDDIDDTTVFHQASTGTIDAGADAKKKKEV
FT                   ENARQQSTDGANQGSVSNTEATAETNRDRDINTGTAGNKGIPRLKSLTSKMYVPKYKGK
FT                   AAMDLAQLLDYKPDQVELSNTRATRAQYDAWYEGVRTDYGIDDSAMQIIMNGLMVWCIE
FT                   NGTSPNINGMWVMMDGEEQVEYPIKPLIDHAKPTFRQIMAHFSNVAEAYIEMRNQRESY
FT                   MPRYGLQRNLTDRSLARYAFDFYEITSKTPNRAREAHIQMKAAALRGSSNRMFGLDGNV
FT                   GTTEEDTERHTTEDVSRNMHSLLGVRNM"
FT   mat_peptide     1..612
FT                   /product="replicase"
FT                   /note="NIb"
FT   mat_peptide     613..1458
FT                   /product="coat protein"
FT                   /note="CP"
FT   3'UTR           1462..1680
XX
SQ   Sequence 1680 BP; 560 A; 312 C; 393 G; 415 T; 0 other;
     tctacagttg tcgataatac actaatggtg attattgcaa tgaaatactc cttatcgaag        60
     tctgggcttc cacatgaact acacaaagaa atctgcaaat tctttgttaa tggagatgac       120
     ttattgatag gagtagatcc caaatatgaa tatattttgg acggaatgtc gcaaaacttt       180
     ttggagttgg ggcttaaata cacgtttgac tctcgcacaa gagacaaggg agatctttgg       240
     tttatgtcac ataaaggaat caaagttgat gacatatgga taccaaagtt ggaacctgag       300
     agaatagtgt ccatacttga gtgggatcga gctacagaac cagttcatcg cttgaacgcc       360
     atttgcgctg caatgataga ggcttgggga tacccagaac tgttgcatga aatacggaag       420
     ttttaccaat ggttgttagc tcaagaacca tatgcaacat tagcatccga aggaaaagct       480
     ccatatatag ccgaagcagc acttcgaaaa ttgtacatgg acactgatgt ggaggatact       540
     gaattgttaa gttatttaag agcaatcttt gaacatgaag acgacattga tgacacaaca       600
     gtattccatc aagcaagcac aggtacaatc gatgccgggg ctgacgcgaa aaagaagaaa       660
     gaggttgaaa acgcgaggca gcagagcaca gatggtgcaa atcaaggttc agttagcaac       720
     actgaagcaa cagctgaaac caatcgtgat agagacataa acacaggcac agcagggaac       780
     aagggcattc ctcgtcttaa atcactaaca agtaaaatgt atgtgccgaa atacaaaggc       840
     aaggcagcaa tggatcttgc ccaactcctc gactacaagc cagaccaagt cgagctttct       900
     aatacgagag cgaccagggc acaatacgat gcatggtatg aaggagttcg cactgactac       960
     ggaatcgatg acagtgcaat gcaaataata atgaatggcc tgatggtatg gtgtatagaa      1020
     aatggtacat caccaaatat aaacggaatg tgggtcatga tggacggaga agaacaagtt      1080
     gaatatccga taaaaccact cattgatcac gccaaaccca cattcaggca gataatggct      1140
     catttcagta acgttgctga agcgtatatt gaaatgcgta accagagaga gtcgtacatg      1200
     ccacggtacg gacttcagcg caatctaacg gacagatctc tagcaaggta tgctttcgat      1260
     ttttatgaaa tcacttctaa gacacctaat agagctcggg aagcccacat ccaaatgaaa      1320
     gcagcagctt tgcgtggttc tagtaataga atgtttggat tggatgggaa cgtaggcaca      1380
     acggaagagg acacggaaag acacaccact gaagacgtta gtaggaatat gcatagtctc      1440
     ctcggcgtga ggaacatgta gtattgtgtg tcggttagaa cttgaataaa caaagtaaca      1500
     acccgttagt atccactttt atagtctttt attttgatag ataacaagat ctagtgctgt      1560
     gttacagcga gtgttcttgc tatcatacat aatggagccg gactttgtat tggggttatt      1620
     agatgttgtg agattttatc tcgtattctc taacctttga tatgacgcga ggggcaaaaa      1680
//