ID   AY949985; SV 2; linear; genomic RNA; STD; VRL; 1866 BP.
XX
AC   AY949985;
XX
DT   19-APR-2005 (Rel. 83, Created)
DT   20-JUN-2006 (Rel. 88, Last updated, Version 5)
XX
DE   Raphanus sativus cryptic virus 1 segment dsRNA 1, complete sequence.
XX
KW   .
XX
OS   Raphanus sativus cryptic virus 1
OC   Viruses; Riboviria; Partitiviridae; unclassified Partitiviridae.
XX
RN   [1]
RP   1-1866
RX   DOI; 10.1007/s00705-005-0685-8.
RX   PUBMED; 16369860.
RA   Chen L., Chen J.S., Liu L., Yu X., Yu S., Fu T.Z., Liu W.H.;
RT   "Complete nucleotide sequences and genome characterization of
RT   double-stranded RNA 1 and RNA 2 in the Raphanus sativus-root cv. Yidianhong
RT   [corrected";
RL   Arch. Virol. 151(5):849-859(2006).
XX
RN   [2]
RP   1-1866
RA   Liu L., Chen J., Chen L., Yu S., Fu T., Wang C., Lang Q.;
RT   ;
RL   Submitted (02-MAR-2005) to the INSDC.
RL   Molecular Microbiology Lab, College of Life Sciences, Zhejang University,
RL   Kaixuan Road 268#, Hangzhou, Zhejiang 310029, China
XX
RN   [3]
RC   Sequence update by submitter
RP   1-1866
RA   Liu L., Chen J., Chen L., Yu S., Fu T., Wang C., Lang Q.;
RT   ;
RL   Submitted (30-AUG-2005) to the INSDC.
RL   Molecular Microbiology Lab, College of Life Sciences, Zhejang University,
RL   Kaixuan Road 268#, Hangzhou, Zhejiang 310029, China
XX
DR   MD5; f4c0efd37bf5e76cd865d02895424f78.
XX
CC   On Aug 30, 2005 this sequence version replaced gi:62722752.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1866
FT                   /organism="Raphanus sativus cryptic virus 1"
FT                   /segment="dsRNA 1"
FT                   /host="Raphanus sativus"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /db_xref="taxon:348449"
FT   CDS             71..1792
FT                   /codon_start=1
FT                   /product="RNA-dependent RNA polymerase"
FT                   /db_xref="GOA:Q52UL1"
FT                   /db_xref="InterPro:IPR001795"
FT                   /db_xref="UniProtKB/TrEMBL:Q52UL1"
FT                   /protein_id="AAX51289.2"
FT                   /translation="MSNLEYLGLDHHWPAIPRFAKSPNDWYFACQQLVRSSICLYSSLL
FT                   GSNDTDTVLNGYYRSHADEDTAEQFFMRYDVEPFDIIKDNYYSQAFDTVTEWFRPSAPI
FT                   HPVHFTDVRWYPWKISTSAERPFTHDPLLKKKVQLSKQLGLLDNARMSFHNCYNDIFTY
FT                   CRHYTHEVKDARPVTLHHIDLHVKPALVRSGEPPKIRTVFGVPKSLIFAEAMFFWPLFS
FT                   DYFTNSETPLLWNYETLNGGWYRLNDEFYQQWQSFCTIFNLDWSEFDMRVYFSMLDDCR
FT                   DAVKSYFCFCGNYCPTRTYPTCRTNPQRLQNLWNWIGTAYKDTPCTTTTGKVYRRRFAG
FT                   MPSGIFCTQFWDSFYNCIMVVTTLEALGFRITDRYFLKVLGDDVIFGILKHIPISKWAD
FT                   FLQDFSTEARRRFNSKLNSKKCGASSGIHGAQVLSYINWNGYPKRDSNQLLAQLLHPKS
FT                   LRDTYPRLMARAIGIYYASCGDPKIRPICNHIYSELKYAGFTPSSTGLHGLFDPNASIG
FT                   FIELDHFPSENEVTCRLHRKSKRSAELQALYWPRDHFLEEAGSSRNCPLSFQVETI"
XX
SQ   Sequence 1866 BP; 529 A; 505 C; 330 G; 502 T; 0 other;
     agaaaaattt acaattttat tgtattactt tttctaagct tttaccttct tttcctaaga        60
     aaaccaagaa atgtcaaatc ttgaatacct cggactagac catcattggc ccgccatccc       120
     gcggtttgcg aaatcaccta acgattggta cttcgcctgc caacaactcg tccgctcatc       180
     gatctgcctc tactccagtc tactcggctc taatgacacc gataccgtcc tcaatggata       240
     ttaccgctct catgctgatg aagacaccgc tgaacaattt ttcatgcgat acgacgttga       300
     gcctttcgac atcataaaag ataactacta ctcacaggct tttgatacag tgactgaatg       360
     gtttcgacca tctgctccta ttcaccctgt ccattttacc gacgtaagat ggtacccctg       420
     gaagatatct actagtgctg aacgcccgtt cacgcacgac cctttactca agaaaaaggt       480
     gcaattatcc aagcaactag gccttctcga caatgctcga atgtcctttc acaactgcta       540
     caatgatata tttacctatt gccgtcacta cactcacgaa gtgaaagacg cgcgacccgt       600
     aactctgcac catattgact tacatgtgaa acctgctctg gttcgctctg gcgaacctcc       660
     aaagatcaga accgtgttcg gagtccccaa atccctaatc ttcgctgaag ctatgttctt       720
     ctggccttta tttagtgatt attttactaa ctctgaaaca ccgctgctat ggaactatga       780
     aaccttaaat ggtggatggt atcgtctgaa tgacgaattc tatcaacaat ggcaaagctt       840
     ctgcactatc ttcaaccttg attggagtga attcgatatg cgagtttact tctcaatgct       900
     cgacgactgc cgagacgctg tcaaatcata cttctgtttt tgtgggaact actgtcctac       960
     ccggacttac cccacatgcc gaactaaccc tcagagactc caaaatctct ggaactggat      1020
     cggaaccgct tacaaagaca caccttgtac taccacgacc ggcaaagtct atcgacgccg      1080
     attcgccgga atgccctccg gaatattctg tacccaattt tgggactcat tctataactg      1140
     tattatggtt gtcaccaccc tagaagcact aggctttcga attactgacc gttacttcct      1200
     aaaagtatta ggcgatgacg ttattttcgg aatcctcaag cacataccca tttcgaaatg      1260
     ggctgacttt ttgcaagact tctctaccga agcacgacgc cgcttcaatt caaaattgaa      1320
     ctccaagaaa tgtggcgcat cctcaggaat tcacggtgcc caagttctca gctacataaa      1380
     ctggaatgga taccccaagc gggattcaaa ccaactttta gctcagttac tccaccctaa      1440
     gtcactccgt gatacttacc caaggctcat ggctcgagcg attggaatct actacgcaag      1500
     ttgtggagac ccaaaaattc gcccgatctg taaccacata tactcggaac tcaaatacgc      1560
     tggatttacc cccagctcga ccggacttca tggtctgttc gacccaaacg cctctatagg      1620
     ctttatcgaa ctcgatcact ttccctcaga aaacgaagtc acttgccgac tacaccgcaa      1680
     atccaaaaga agcgctgaac tgcaagcact ctactggcct cgcgaccact tcctagaaga      1740
     agctggaagt agcaggaact gccccctgtc cttccaagtt gagacgatct aaatgattaa      1800
     ttttagaatt attgtaaaac tcaatattct gtaatgatct ctctaaaaaa aaaataaaat      1860
     aaaacc                                                                 1866
//