ID   AY948436; SV 1; linear; genomic RNA; STD; VRL; 1635 BP.
XX
AC   AY948436;
XX
DT   02-MAR-2006 (Rel. 87, Created)
DT   02-MAR-2006 (Rel. 87, Last updated, Version 1)
XX
DE   Vanilla distortion mosaic virus isolate VM-36 polyprotein gene, partial
DE   cds.
XX
KW   .
XX
OS   Vanilla distortion mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1635
RA   Smitha R., Krishnareddy M.;
RT   "Molecular characterization of a new potyvirus infecting vanilla (Vanilla
RT   planifolia)";
RL   Unpublished.
XX
RN   [2]
RP   1-1635
RA   Smitha R., Krishnareddy M.;
RT   ;
RL   Submitted (28-FEB-2005) to the INSDC.
RL   Division of Plant Pathology, Indian Institute of Horticultural Research,
RL   Hessaraghatta Lake PO, Bangalore, Karnataka 560089, India
XX
DR   MD5; 58561fecdd290e14feb20ca5a83b6d52.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1635
FT                   /organism="Vanilla distortion mosaic virus"
FT                   /host="Vanilla planifolia"
FT                   /isolate="VM-36"
FT                   /mol_type="genomic RNA"
FT                   /country="India"
FT                   /isolation_source="infected vanilla leaves"
FT                   /db_xref="taxon:326202"
FT   CDS             <1..1443
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q29SN6"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:Q29SN6"
FT                   /protein_id="AAY43685.1"
FT                   /translation="GNNSGQPSTVVDNTLMVILAMRYALLAEGIPNEEQNDICRYYVNG
FT                   DDLIIAVAPTHEELYDGMQSRFAQLGLNYDFSSRTRNKSELWFMSHQGVLRDGIFIPKL
FT                   EKERVVSILEWSRSSIPEHRLEAICAAMVEAWGYDDLVHEIRKFYAWVLEQAPYNGLAQ
FT                   QGKAPYISEIALKSLYPSEEATESEIQRYLSACFTFYLHREEDDTVYPQGDKDKEITPA
FT                   TGSGEVSGGDKQIPGNQQVSKLDRDVNAGTSGTFQVPRIKTMTSKMRMPKIRGKTALNL
FT                   DHLLLYVPDQLDLSNTRATQKQFDYWYDNVSREYEVDDNKMQILLNGLMVWCIENGTSP
FT                   NIAGEWVMMDGAEQVTFPIKPLLEYAQPTFRQIMAHFSNVAEAYIEMRNMKEPYMPRYG
FT                   RMRNLNDMSLARYAFDFYEITSKTPSRAREAHMQMKAAALHGSISNMFGLDGNVATTSE
FT                   NTERHTASDVNSNMHSLLGMRM"
FT   mat_peptide     <1..636
FT                   /product="NIb"
FT                   /note="nuclear inclusion protein"
FT   mat_peptide     637..1440
FT                   /product="coat protein"
FT                   /note="capsid protein"
FT   3'UTR           1444..1635
XX
SQ   Sequence 1635 BP; 527 A; 349 C; 393 G; 366 T; 0 other;
     gggaacaata gtgggcagcc atccacagtg gttgataaca cgctcatggt gatcctggcc        60
     atgcgatacg cattactcgc agaaggcatc cccaatgaag aacaaaatga catatgccga       120
     tattatgtca atggggatga tttaataatc gcagtggcac ctacacacga ggagttatac       180
     gacggcatgc aatctcgatt cgcacagctt ggtctcaact acgatttctc ttcgagaacg       240
     cgcaacaaat cggaattgtg gtttatgtcg caccagggcg tacttagaga cggcattttc       300
     atcccaaagt tggagaaaga aagagtagtc tcaatcttag agtggagtcg ttcgtcaatt       360
     ccagaacata ggctcgaggc aatctgcgca gctatggtgg aagcatgggg atatgatgat       420
     ttggtgcatg aaatccggaa gttctatgca tgggttttgg aacaagcccc ttacaatgga       480
     ctggcccaac aggggaaagc tccatacatc tcggaaattg ccttaaagag cttataccct       540
     tcggaggaag ctacagaaag tgagattcaa cgttatctat ccgcttgttt caccttctac       600
     ctacacagag aagaggacga cacagtgtat cctcaagggg acaaggacaa ggaaataaca       660
     cctgccactg gtagcggaga agtaagtggg ggcgataaac aaattcctgg caaccagcag       720
     gtctccaaac tagataggga tgtgaatgct ggaacaagtg gtactttcca agtccctaga       780
     attaaaacga tgacatcaaa aatgcgcatg ccaaaaataa gaggaaaaac ggctttgaat       840
     ctcgatcacc ttctcctata cgtgccagat cagctcgatt tgtcaaacac acgggcaacg       900
     cagaagcaat ttgattattg gtacgacaat gtgagcagag agtatgaggt ggatgataac       960
     aaaatgcaaa tactgctcaa tggtctaatg gtttggtgca ttgaaaatgg aacgtcaccc      1020
     aacattgcag gagaatgggt gatgatggac ggagcggagc aggtaacatt cccaataaaa      1080
     ccgctcctcg agtatgcgca accgaccttc agacaaatta tggctcactt cagcaacgtg      1140
     gcagaggcat acatcgaaat gcgcaatatg aaagagccat acatgccacg ttatggaaga      1200
     atgcgaaact tgaacgacat gagcctggca cgctacgcat tcgacttcta cgaaataacg      1260
     tcgaaaacac catcacgcgc aagagaggcc cacatgcaaa tgaaggcagc cgcactgcac      1320
     ggcagcatca gtaacatgtt tggattggat ggtaatgtag caacaacgag tgaaaacacg      1380
     gaaaggcaca cagcgagcga tgtaaacagt aacatgcata gcctcttagg catgcgaatg      1440
     taatatccac tgaggtgtgt gctggatgag tgtatgactc aaccgaacag aactacgtat      1500
     aatatttaag tttaaatttc atgtcttttt attctacgta agtcctgttt cgaagcagcc      1560
     atgttagctt tcttagtgag gttccacctc gtgaaatcta atccatggaa gcctagagac      1620
     aaaaaaaaaa aaaaa                                                       1635
//