ID   AY943946; SV 1; linear; genomic RNA; STD; VRL; 1662 BP.
XX
AC   AY943946;
XX
DT   02-MAR-2006 (Rel. 87, Created)
DT   02-MAR-2006 (Rel. 87, Last updated, Version 1)
XX
DE   Vanilla distortion mosaic virus isolate VM-27 polyprotein gene, partial
DE   cds.
XX
KW   .
XX
OS   Vanilla distortion mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1662
RA   Smitha R., Jalali S., Krishnareddy M.;
RT   "Molecular characterization of a new potyvirus infecting vanilla (Vanilla
RT   planifolia)";
RL   Unpublished.
XX
RN   [2]
RP   1-1662
RA   Smitha R., Krishnareddy M.;
RT   ;
RL   Submitted (24-FEB-2005) to the INSDC.
RL   Division of Plant Pathology, Indian Institute of Horticultural Research,
RL   Hessaraghatta Lake PO, Bangalore, Karnataka 560089, India
XX
DR   MD5; 2cf756493bb1485a89a263a7e055640d.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1662
FT                   /organism="Vanilla distortion mosaic virus"
FT                   /host="Vanilla planifolia"
FT                   /isolate="VM-27"
FT                   /ecotype="Kanakapura"
FT                   /mol_type="genomic RNA"
FT                   /country="India"
FT                   /isolation_source="infected leaves"
FT                   /db_xref="taxon:326202"
FT   CDS             <1..1470
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q29TU0"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:Q29TU0"
FT                   /protein_id="AAY23365.1"
FT                   /translation="GNNSGQPSTVVDNTLMVILAMRYALLAEGIPNEEQNDICRYYVNG
FT                   DDLIIAVAPTHEGLYDGMQSRFAQLGLNYDFSSRTRNKSELWFMSHQGVLRDSIFIPKL
FT                   EKERVVSILEWSRSSIPEHRLEAICAAMVEAWGYDDLVHEIRKFYAWVLEQAPYNELAQ
FT                   QGKAPYISEVALKSLYTSEEATESEIQRYLSACLDFYLNREEDDTVYHQGDKMDAGNPP
FT                   GKDKEITPATGSGEVSGGDKQIPGNQQVSKLDRDVNAGTSGTFQVPRIKTMTSKMRMPK
FT                   IRGKTALNLDHLLLYVPDQLDLSNTRATQKQFDYWYDNVSREYEVDDNKMQILLNGLMV
FT                   WCIENGTSPNIAGEWVMMDGTEQVTFPIKPLLEYAQPTFRQIMAHFSNVAEAYIEMRNM
FT                   KEPYMPRYGRMRNLNDMSLARYAFDFYEITSKTPSRAREAHMQMKAAALHGSVSNMFGL
FT                   DGNVATTSENTERHTASDVNSNMHSLLGMRM"
FT   mat_peptide     <1..636
FT                   /product="NIb protein"
FT                   /note="nuclear inclusion body protein"
FT   mat_peptide     637..1467
FT                   /product="coat protein"
FT                   /note="capsid protein"
FT   3'UTR           1471..1662
XX
SQ   Sequence 1662 BP; 541 A; 358 C; 399 G; 364 T; 0 other;
     ggtaataata gcgggcagcc atccacagtg gttgataaca cgctcatggt gatcctggcc        60
     atgcgatacg cattactcgc agaaggcatc cccaatgaag aacaaaatga catatgccga       120
     tattatgtca atggggatga tttaataatc gcagtggcac ctacacacga ggggctatat       180
     gatggtatgc aatctcgatt cgcacaactt ggtcttaact atgacttctc ttcaagaacg       240
     cgcaacaaat cggaactgtg gttcatgtcg caccagggcg tacttaggga cagcattttc       300
     atcccaaaat tagagaaaga aagagtggtc tcaatcttag aatggagccg ttcatcaatt       360
     ccagaacata ggctcgaagc aatttgcgca gccatggtgg aagcgtgggg ttacgatgat       420
     ctggtgcacg aaatccgaaa gttctacgca tgggttttgg aacaagcccc ctacaacgaa       480
     ttggctcagc aggggaaagc tccatacatc tcggaagtcg ccttaaagag tttatacacg       540
     tcggaggaag ccacagagag cgagatccaa cgttatttat ccgcttgtct cgacttctac       600
     ctaaataggg aagaggacga cacagtgtat catcaagggg acaagatgga tgcaggtaac       660
     cccccaggga aggacaagga aataacacct gccactggta gcggagaagt aagtgggggc       720
     gataaacaaa ttcctggcaa ccagcaggtc tccaaactag atagggatgt gaatgctgga       780
     acaagtggca ctttccaagt ccctagaatt aaaacgatga catcaaaaat gcgcatgcca       840
     aaaataagag gaaaaacggc tttgaatctc gatcaccttc tcctatacgt gccagatcag       900
     ctcgatttgt caaacacacg ggcaacgcag aagcaatttg attattggta cgacaatgtg       960
     agcagagagt atgaggtgga tgataacaaa atgcaaatac tgctcaatgg tctaatggtt      1020
     tggtgcattg aaaatggaac gtcacctaac attgcaggag aatgggtgat gatggacgga      1080
     acggagcagg taacattccc aataaaaccg ctcctcgaat atgcgcaacc gacctttaga      1140
     caaattatgg ctcacttcag taacgtggca gaggcataca tcgaaatgcg caatatgaaa      1200
     gagccataca tgccacgcta tggaagaatg cgaaacttga acgacatgag cctagcacgc      1260
     tacgcattcg acttctacga aataacgtcg aaaacaccat cacgcgcaag agaggcccac      1320
     atgcaaatga aggcagccgc actgcacggc agcgtcagca acatgtttgg attggatggt      1380
     aatgtagcaa caacgagtga aaacacggaa aggcacacag cgagcgatgt aaacagtaac      1440
     atgcatagcc tcttaggcat gcgaatgtaa tatccactga ggtgtgtgct ggatgagtgt      1500
     atgactcaac cgaacagaac tacgtataat atttaagttt aaatttcatg tctttttatt      1560
     ctacgtaagt cctgtttcga agcagccatg ttagctttct tagtgaggtt ccacctcgtg      1620
     aaatctaatc catggaagcc tagagacaaa aaaaaaaaaa aa                         1662
//