ID   AY928516; SV 1; circular; genomic DNA; STD; VRL; 2619 BP.
XX
AC   AY928516;
XX
DT   21-SEP-2005 (Rel. 85, Created)
DT   21-SEP-2005 (Rel. 85, Last updated, Version 1)
XX
DE   Pepper golden mosaic virus isolate PepGMV-Ser segment DNA-A, complete
DE   sequence.
XX
KW   .
XX
OS   Pepper golden mosaic virus
OC   Viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-2619
RX   DOI; 10.1094/PHYTO-95-1217.
RX   PUBMED; 18943475.
RA   Brown J.K., Idris A.M., Ostraw K.M., Goldberg N., French R., Drake D.C.;
RT   "Genetic and Phenotypic Variation of the Pepper golden mosaic virus
RT   Complex";
RL   Phytopathology 95(10):1217-1224(2005).
XX
RN   [2]
RP   1-2619
RA   Brown J.K., Idris A.M., Stenger D.C.;
RT   ;
RL   Submitted (11-FEB-2005) to the INSDC.
RL   Plant Sciences, University of Arizona, Tucson, AZ 85721, USA
XX
DR   MD5; ffe755a56e19dc0b35fedb43abefcdce.
DR   EuropePMC; PMC4174809; 25288955.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2619
FT                   /organism="Pepper golden mosaic virus"
FT                   /segment="DNA-A"
FT                   /isolate="PepGMV-Ser"
FT                   /mol_type="genomic DNA"
FT                   /country="USA"
FT                   /db_xref="taxon:223301"
FT   CDS             208..963
FT                   /codon_start=1
FT                   /product="AV1"
FT                   /note="coat protein"
FT                   /db_xref="GOA:Q3MJQ2"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:Q3MJQ2"
FT                   /protein_id="AAY16463.1"
FT                   /translation="MVKRDAPWRLMAGTSKVSRSANYSRGTGMGPKFDKAAAWVNRPMY
FT                   RKPRIYRTFRSPDVPRGCEGPCKVQSFEQRHDISHVGKVMCISDVTRGNGITHRVGKRF
FT                   CVKSAYVLGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMYDNEPSTATV
FT                   KNDLRDRYQVMHRFSAKVTGGQYASNEQALVRRFWKVNNYVVYNHQEAGKYENHTENAL
FT                   LLYMACTHASNPVYATLKIRIYFYDSITN"
FT   CDS             complement(960..1358)
FT                   /codon_start=1
FT                   /product="AC3"
FT                   /note="replication enhancer; REn"
FT                   /db_xref="GOA:Q3MJQ1"
FT                   /db_xref="InterPro:IPR000657"
FT                   /db_xref="UniProtKB/TrEMBL:Q3MJQ1"
FT                   /protein_id="AAY16466.1"
FT                   /translation="MDSRTGESITVRQAENSVFIWEVPNPLFFRIQRVETPLYTRTRIY
FT                   HIEVRFNHNLRRALALHKAFLHFQVWTTSMTASGTTYLNRFKFRVMLYLHRLGAIGINN
FT                   VIRAVRFATDKSYVNYVLENHEIKYKLY"
FT   CDS             complement(1105..1494)
FT                   /codon_start=1
FT                   /product="AC2"
FT                   /note="transcriptional transactivtor protein; TrAP"
FT                   /db_xref="GOA:Q3MJQ0"
FT                   /db_xref="InterPro:IPR000942"
FT                   /db_xref="UniProtKB/TrEMBL:Q3MJQ0"
FT                   /protein_id="AAY16465.1"
FT                   /translation="MLNSSSSTLPSIKAQHRIAKKRVIRRRRIDLNCGCSIFLHINCAN
FT                   NGFTHRGEHHCASGREFRFYLGGSKSPIFQDTTSRDAVVHQNQDLPHRSTVQPQPTQSI
FT                   GSPQGIPPFPSLDDFDDSFWDDIFK"
FT   CDS             complement(1436..2485)
FT                   /codon_start=1
FT                   /product="AC1"
FT                   /note="replication initiator protein; Rep"
FT                   /db_xref="GOA:Q3MJP9"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="UniProtKB/TrEMBL:Q3MJP9"
FT                   /protein_id="AAY16464.1"
FT                   /translation="MPLPPKSFRLQCKNIFLTYPQCDIPKDETLEMLQSLKWSVVKPIY
FT                   IRVSREEHSDGFPHLHCLIQLTGKCNIKDARFFDITHPRRSAQFHPNVQAAKDTNAVKN
FT                   YITKDGDYCETGKYKVSGGSKANKDDVYHNAVNAASATEALDIIKAGDPRTFIVSYHNV
FT                   KSNIERLFKPPPKQWTPPYPISSFNNVPEDMQHWVAEYFGRSSAARPDRPISIVIEGDS
FT                   RSGKTMWARALGPHNYLSGHLDFNSKVYSNDVEYNVIDDITPHYLKLKHWKELIGAQRD
FT                   WQSNCKYGKPVQIKGGIPSIVLCNPGEGSSYIAFLNKEENAPLRAWTQKNAQFVILHAP
FT                   LYKSTAQDS"
XX
SQ   Sequence 2619 BP; 678 A; 543 C; 626 G; 772 T; 0 other;
     accggatggc cgcgattttt tggagtattt gtgggaccac tcagaataga gggctgagat        60
     taaatagata aagagatggg accaccaatt atttgatttt gactgaccaa tctcatcccg       120
     gctgtcaagt ctagatattt gtgccttggt gaccaaggtg tggtcctata aatgcacgtg       180
     catgtgcatt tatatcttta attcaaaatg gttaagcggg atgccccatg gcgtttaatg       240
     gcggggacct ccaaggtttc ccgctctgct aattattcac gtggcacggg tatgggccct       300
     aaattcgata aggccgctgc ttgggttaac aggcccatgt acaggaagcc caggatatat       360
     cggaccttta gaagcccgga tgttcctaga ggttgtgaag ggccttgtaa ggtccagtca       420
     tttgagcagc ggcatgatat ctctcatgtt ggcaaggtca tgtgcatttc ggacgtgaca       480
     cgtggtaatg gtattactca tcgtgtaggg aagcgtttct gtgtcaagtc tgcatatgtt       540
     ttgggtaaga tctggatgga cgagaatatc aagctcaaaa accacaccaa cagcgtcatg       600
     ttctggcttg tgcgagatag gagaccatat ggtaccccta tggatttcgg gcaggtgttc       660
     aacatgtatg acaacgagcc tagtacagcc actgtgaaga acgatctgcg tgatcgttac       720
     caagttatgc acaggttctc agctaaggtc acaggtggac agtatgccag caacgagcag       780
     gcgttggtga gacgattttg gaaagtgaac aactacgtcg tctacaacca tcaggaagct       840
     ggcaaatatg agaatcatac tgagaacgcc ctcttattgt atatggcatg tactcatgca       900
     tctaaccctg tgtacgcgac attgaaaatt cgaatctatt tctacgattc gataacaaat       960
     taataaagtt tgtattttat ttcatgattc tcaagtacat aatttacata ggatttgtcc      1020
     gtcgcaaaac gaacagctcg aattacattg tttatgccta tggcccctag cctatgtaaa      1080
     tacaacatga cgcgaaattt gaatctattt aaatatgtcg tcccagaagc tgtcatcgaa      1140
     gtcgtccaga cttggaaatg gaggaatgcc ttgtggagag ccaatgctct gcgtaggttg      1200
     tggttgaacc gtacttcgat gtggtaaatc ctggttctgg tgtacaacgg cgtctctact      1260
     cgttgtatcc tgaaaaatag gggatttgga acctcccaaa taaaaacgga attctctgcc      1320
     tgacgcacag tgatgctctc cccggtgcgt gaatccatta tttgcgcagt tgatatggag      1380
     gaaaatagag cagccgcagt ttaggtctat tcgtcgtctt cgaataactc gttttttagc      1440
     tatcctgtgc tgtgctttta tagaggggag cgtggaggat gacgaattga gcattttttt      1500
     gtgtccacgc tctcaatggt gcattttcct ctttgttgag gaaagctata tagctgctac      1560
     cttcccctgg attgcacagc acaattgatg gtatcccgcc tttaatttga actggctttc      1620
     cgtatttaca gttggactgc cagtctcttt gggccccaat tagctctttc cagtgtttca      1680
     actttagata atggggcgtg atatcatcaa tgacgttata ctccacatcg tttgaataga      1740
     cttttgaatt gaaatcaagg tgaccgctca aataattatg tgggcctaat gcacgtgccc      1800
     acattgtctt gccgcttcgc gaatcgccct caatgacaat actaatcggt ctatctggcc      1860
     gcgcagcgga actccgacca aaatattcag caacccaatg ttgcatatcc tcaggaacgt      1920
     tattaaacga ggaaattgga taaggaggag tccattgttt aggaggaggt ttgaacaggc      1980
     gctcgatgtt agacttaacg ttatgatagc tgacaatgaa cgttcttgga tctccagctt      2040
     ttataatgtc gagcgcctct gtcgcacttg ctgcatttac agcgttatgg tagacgtcgt      2100
     ctttatttgc tttggaaccc ccggaaactt tgtactttcc agtttcacaa taatcgccat      2160
     ctttagtgat ataattcttt acggcatttg tgtctttagc cgcctgaacg tttggatgaa      2220
     actgggcaga tctccggggg tgagtaatgt cgaagaaccg agcgtctttg atgttgcact      2280
     ttccagttag ctggattaga cagtgcaagt gcggaaaccc atcggaatgc tcctcccgtg      2340
     aaacccgtat gtatatgggt tttacgacag accattttaa cgactgtagc atttcgagag      2400
     tttcatcctt tgggatatcg cattgtggat atgttaagaa aatgttttta cattgtaaac      2460
     gaaatgattt tggtggtagt ggcattttcg caaatatggt gtaggactcc agcagagtac      2520
     ctcataaaac cgtactatgt ttgtggagtc ctggagtccc ttaaatacta gaactctctg      2580
     ggggaactcc aggggcaaaa gcggccatcc tataatatt                             2619
//