ID AY917135; SV 4; linear; genomic RNA; STD; VRL; 2587 BP. XX AC AY917135; XX DT 01-MAR-2005 (Rel. 83, Created) DT 28-JAN-2010 (Rel. 103, Last updated, Version 7) XX DE Plum pox virus strain M isolate ISPaVe 44 polyprotein gene, partial cds. XX KW . XX OS Plum pox virus OC Viruses; Riboviria; Potyviridae; Potyvirus. XX RN [1] RP 1-2587 RX DOI; 10.1007/s11248-005-1773-y. RX PUBMED; 16315100. RA Di Nicola-Negri E., Brunetti A., Tavazza M., Ilardi V.; RT "Hairpin RNA-mediated silencing of Plum pox virus P1 and HC-Pro genes for RT efficient and predictable resistance to the virus"; RL Transgenic Res. 14(6):989-994(2005). XX RN [2] RP 1-2587 RA Ilardi V., Brunetti A., Di Nicola-Negri E.; RT ; RL Submitted (01-FEB-2005) to the INSDC. RL General Pathology and Physiopatholoy - Plant Pathology Research Institute, RL Council for Research and Sperimentation in Agriculture - C.R.A. - Plant RL Pathology Research Institute, via C.G. Bertero, 22, Rome, RM 00156, Italy XX RN [3] RC Sequence update by submitter RP 1-2587 RA Ilardi V., Brunetti A., Di Nicola-Negri E.; RT ; RL Submitted (02-NOV-2009) to the INSDC. RL General Pathology and Physiopatholoy - Plant Pathology Research Institute, RL Council for Research and Sperimentation in Agriculture - C.R.A. - Plant RL Pathology Research Institute, via C.G. Bertero, 22, Rome, RM 00156, Italy XX RN [4] RC Sequence update by submitter RP 1-2587 RA Ilardi V., Brunetti A., Di Nicola-Negri E.; RT ; RL Submitted (14-JAN-2010) to the INSDC. RL General Pathology and Physiopatholoy - Plant Pathology Research Institute, RL Council for Research and Sperimentation in Agriculture - C.R.A. - Plant RL Pathology Research Institute, via C.G. Bertero, 22, Rome, RM 00156, Italy XX RN [5] RC Sequence update by submitter RP 1-2587 RA Ilardi V., Brunetti A., Di Nicola-Negri E.; RT ; RL Submitted (27-JAN-2010) to the INSDC. RL General Pathology and Physiopatholoy - Plant Pathology Research Institute, RL Council for Research and Sperimentation in Agriculture - C.R.A. - Plant RL Pathology Research Institute, via C.G. Bertero, 22, Rome, RM 00156, Italy XX DR MD5; 80de7f52009841e2b742bf568a6580a0. XX CC On Jan 27, 2010 this sequence version replaced gi:283855904. XX FH Key Location/Qualifiers FH FT source 1..2587 FT /organism="Plum pox virus" FT /host="Prunus persica" FT /lab_host="Nicotiana benthamiana" FT /strain="M" FT /isolate="ISPaVe 44" FT /mol_type="genomic RNA" FT /country="Italy:Veneto" FT /db_xref="taxon:12211" FT 5'UTR 1..120 FT CDS 121..>2587 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="GOA:Q5D1Z2" FT /db_xref="InterPro:IPR001456" FT /db_xref="InterPro:IPR002540" FT /db_xref="InterPro:IPR031159" FT /db_xref="InterPro:IPR039560" FT /db_xref="InterPro:IPR042308" FT /db_xref="UniProtKB/TrEMBL:Q5D1Z2" FT /protein_id="AAX12487.1" FT /translation="MSTIVFGSFTCHLDAAIHQDNADRLAKAWTRPENRQVSNVHLLCR FT RAAKSLINTYESATASAWKGLEEKLQPMFAKREFSKTVTKRKGLRCFKESSEKFIEKKL FT KKQYKEERERFQFLNGPDAIVNQISVDKCEASVWVPFPHIIEKPSFTTPSMKKKVVFTK FT VRMSEASLQLFMRRVATNAKANGQKVEIIGRKRVVGHYTTKSRLTYFRTHVRHLDGSKP FT RYDLVLDEATKKILQLFANTSGFHHVHKKGEITPGMSGFVVNPMNLSDPMHVYDTDLFI FT VRGKHNSILVDSRCKVSKEQSNEIVHYSDPGKQFWDGFTNSFMQCKLRETDHQCTSDLD FT VKECGYVAALVCQAIIPCGKITCLQCAQKYSYMSQQEIRDRFSTVIEQHEKTVMDNYPQ FT FSHVLAFLKRYRELMRVENQNYEAFKDITHMISERKEAPFSHLNKINELIIKGGMMSAQ FT DYIEASDHLRELARYQKNRTENIRSGSIKAFRNKISSKAHVNMQLMCDNQLDTNGNFVW FT GQREYHAKRFFRNYFDVIDVSEGYRRHIVRENPRGIRKLAIGNLVMSTNLAALRKQLLG FT EECIHFEVSKECTSKRGENFVYQCCCVTHEDGTPLESEIISPTKNHLVVGNSGDSKYVD FT LPTAKGGAMFIAKAGYCYINIFLAMLININEDEAKSFTKTVRDTIVPKLGTWPSMMDLA FT TACHFLAVLYPETRNAELPRILVDHEAKIFHVVDSFGSLSTGMHVLKANTINQLISFAS FT DTLDSSMKTYLVGGLEVDKCDEFKNVKLLIRSIYKPQIMEQVLKEEPYLLLMSVLSPGV FT LMALFNSGSL" FT mat_peptide 121..1047 FT /product="P1 protein" FT mat_peptide 1048..2418 FT /product="helper component-proteinase" FT /note="HC-Pro" FT mat_peptide 2419..>2587 FT /product="P3 protein" XX SQ Sequence 2587 BP; 825 A; 513 C; 578 G; 671 T; 0 other; caaaatttta tgcgatcaaa tcaatctcaa gctatcaaat ttttccaaat ctcacttgaa 60 agatcaagaa tcaacaaaga acattcctca aattctctac caactttact gcaagtcaag 120 atgtcaacca ttgtatttgg ctcattcact tgccacctcg atgcagctat ccaccaggat 180 aatgcagaca gattggcaaa ggcctggacc cgtccagaga accgccaagt cagtaacgtg 240 catctactgt gccgaagagc ggcaaaaagt ctcataaata catatgagag tgcaacagct 300 agtgcttgga aaggcctgga ggagaagttg caacccatgt ttgctaagcg agagtttagc 360 aaaacagtca caaagagaaa agggcttcgg tgcttcaaag aaagctctga aaaatttatc 420 gaaaagaagc tcaagaaaca gtataaagag gagcgtgaga gatttcaatt tctcaacggt 480 ccagatgcaa tagtcaacca aatcagtgtt gacaaatgtg aagcttcagt atgggtgcca 540 ttccctcata ttattgagaa acctagcttt acaacaccat caatgaaaaa gaaggtagtg 600 tttactaagg ttaggatgtc cgaggcatca ctacaacttt tcatgaggag ggttgctaca 660 aacgctaagg caaatggtca aaaagttgag atcatagggc gtaagcgtgt agtcggtcac 720 tacacaacga aaagtcgtct gacatacttt cgcacacatg ttcggcactt ggatggttca 780 aaaccacgct atgaccttgt gttggacgag gcaaccaaga agattctgca actgtttgca 840 aacacaagtg gttttcacca tgtccacaag aaaggggaga taacaccagg aatgagcgga 900 tttgtggtga atcccatgaa tctatcggac ccaatgcatg tgtatgacac ggatcttttt 960 atagttcgtg gaaaacacaa ctccattctt gttgactcac ggtgtaaggt ttctaaagag 1020 cagagcaatg agatagttca ctactctgac ccaggcaaac aattttggga tggtttcacc 1080 aattcattta tgcagtgcaa gctacgcgaa actgatcatc agtgcacatc tgacctggac 1140 gtgaaggagt gtggttatgt tgcagcactt gtgtgccaag cgataatccc ttgtggaaaa 1200 attacatgtc tgcaatgtgc tcaaaagtac tcttacatgt cacaacagga aatacgtgat 1260 agattttcga cagtaattga gcagcatgag aaaacagtga tggataacta tccacagttt 1320 tcacatgttc ttgcttttct aaagaggtat cgtgaattga tgcgcgtgga aaatcagaat 1380 tatgaagctt tcaaggatat cacgcacatg ataagcgagc gcaaagaagc acctttttcc 1440 catctcaaca agatcaatga attaatcatt aagggtggta tgatgagcgc acaagactac 1500 atagaagcct cggatcatct gcgcgaacta gcgcgatatc agaagaatcg cacagagaac 1560 attaggagcg gatctataaa ggctttcagg aacaaaatct catcaaaagc acatgtcaat 1620 atgcagctta tgtgtgataa tcaacttgat actaatggca atttcgtgtg gggacagaga 1680 gaatatcatg ccaaacgctt ctttaggaat tatttcgatg tgatcgatgt tagcgagggc 1740 tacagacgtc atattgttcg tgaaaatcct agaggcattc gcaaattggc cattggcaac 1800 cttgttatgt caacgaatct ggcagcacta cgtaagcagc tcttgggtga agagtgcatt 1860 cattttgagg tctcaaagga atgcactagc aagcgagggg aaaattttgt ataccaatgt 1920 tgctgtgtca cacacgaaga cggcacacca ctggagtctg aaataataag tccaacaaag 1980 aatcacttag ttgttggtaa ctcaggtgat tcgaagtatg tggatttgcc cacagcaaag 2040 ggaggtgcaa tgttcatagc gaaggcaggt tattgttaca tcaacatttt ccttgctatg 2100 ctgatcaaca taaatgaaga tgaagcaaaa agtttcacaa agacagtgcg tgacactatt 2160 gtacccaagc ttgggacatg gccatcgatg atggacttag ctacagcttg ccactttctc 2220 gcagttctct acccagaaac tcggaatgct gagcttccac gaatactcgt tgatcatgaa 2280 gcaaagatct ttcatgtggt tgactcattc ggatcactgt caactggaat gcatgttttg 2340 aaagcgaaca caatcaatca acttattagc tttgctagtg atacattgga ttcaagcatg 2400 aaaacatacc tggttggagg tcttgaagtg gataagtgtg atgaattcaa aaatgtcaag 2460 ctcttgatca gaagcattta caagccacaa atcatggagc aggtgcttaa ggaagaaccg 2520 tatttactgc tcatgagtgt tttgtcacct ggtgtcttaa tggcgctgtt caatagtggt 2580 tcattgg 2587 //