ID AY913795; SV 1; linear; genomic RNA; STD; VRL; 3897 BP. XX AC AY913795; XX DT 01-MAY-2005 (Rel. 83, Created) DT 06-DEC-2007 (Rel. 94, Last updated, Version 3) XX DE Mint virus 2 replicase gene, partial cds; and p24, movement protein, coat DE protein, and RNA binding protein genes, complete cds. XX KW . XX OS Mint virus 2 OC Viruses; Riboviria; Tymovirales; Betaflexiviridae; Trivirinae; Vitivirus. XX RN [1] RP 1-3897 RX DOI; 10.1007/s00705-007-1030-1. RX PUBMED; 17680328. RA Tzanetakis I.E., Postman J.D., Martin R.R.; RT "Identification, detection and transmission of a new vitivirus from RT Mentha"; RL Arch. Virol. 152(11):2027-2033(2007). XX RN [2] RP 1-3897 RA Tzanetakis I.E.; RT ; RL Submitted (27-JAN-2005) to the INSDC. RL Botany and Plant Pathology, Oregon State University and USDA-ARS, 3420 RL Orchard Ave, Corvallis, OR 97330, USA XX DR MD5; 92205f0e02186f17f109c7a790cc0da5. DR EuropePMC; PMC5999178; 29516247. XX FH Key Location/Qualifiers FH FT source 1..3897 FT /organism="Mint virus 2" FT /isolate="NCGR MEN 454.004" FT /mol_type="genomic RNA" FT /db_xref="taxon:312998" FT CDS <1..1503 FT /codon_start=1 FT /product="replicase" FT /note="polymerase domain" FT /db_xref="GOA:Q52V15" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:Q52V15" FT /protein_id="AAX07259.1" FT /translation="AGDPYLKGLLSLLEDIEEVEPEVPETTVLQPERTHLYLSAGSNEV FT SVSELCEKMNREVHTEAGLTDQIDEVGYKGESANPMTHKALYLHHKNDDVATFMLSVKK FT RLRFRDAEKNSRKYEKNKGFGKQMFKILQQTYNLVHPNSLPELDRCEAEFTRKRIAKSR FT NLIEKHSYRSDPDWPSNYLKIFLKQQVCTKMEKRGVDAKAGQTIACFSHAVLCRFGPQL FT RRTEKALRAQLGDNVMIYSQKNYTDLDNWSRLYVDGMIGTDSDYEAFDRSQDEKILSFE FT VEVLKFFLWPEELINEYVTLKLMMGCSMGDLAIMRFSGEFGTFFFNTICNMVFTCMRYC FT ITKDTPICYAGDDMYAPGVLQVKSDYEHVLKELQLKAKVQVSTSPLFCGWRMTPYGIVK FT DPNLLLDRWKMAKRDGKLDLCMINYALEAVYGYRLGEHLYDVNIDIDAQQELVREIVKV FT KDKLPKNVSKQFSKDPNECFSDGEELDLRVSPEGTFQGEQEV" FT misc_feature 541..1248 FT /note="Region: polymerase motifs" FT CDS 1522..2151 FT /codon_start=1 FT /product="p24" FT /db_xref="UniProtKB/TrEMBL:Q52V14" FT /protein_id="AAX07260.1" FT /translation="MSRDYFKEFIGTGPGKSKSEEVGVEGKPTTELGEVCRVLVENGVG FT LGHFKSNPVAINKSKQLRRLGVLVLELNGYNESTFLNRLEERRREISRTPSECSVGEEK FT GVRERKISLVNLCKEICTTGVKGEPELELQGDQLRILLSWNRTEYSWDNNEFRPLGFRT FT YAFEQDRLRQYKWSLHGLNAFPNAHGRITEISGSGLRDRQRSGGCL" FT CDS 1982..2971 FT /codon_start=1 FT /product="movement protein" FT /note="p37" FT /db_xref="InterPro:IPR028919" FT /db_xref="UniProtKB/TrEMBL:Q52V13" FT /protein_id="AAX07261.1" FT /translation="MSSGHSVSELMPSNRIGYGNTNGAYTGSMRFQTPMEESPKSAVQV FT FETGKGVEDVSELKSKLKRRKVYNMRFLEDLWPTQVFKSVVHNEIRVEDGKVDLDVNLI FT DQDMVKNLDPNVKPYIHLGCIAIAVIPHGRDAPGECEFELVDTRYSSDHGSLARFGCKM FT ANSLSAFARFPGYFISSHDIKDGYTIGLRVQGKNLELNGGVRPMSIQVICIFKICGEEF FT KHRYALGKLPGNAYQDLLNAYLIATEDDTEFEAHSKVAKLKGKTAEAKMVQPERCNTKE FT EDTLVMSDVYKTIKELYPEHGGFIEEKSDQVNDNDLTQRGGQLRGREL" FT CDS 2847..3476 FT /codon_start=1 FT /product="coat protein" FT /note="p23" FT /db_xref="GOA:Q52V12" FT /db_xref="InterPro:IPR008879" FT /db_xref="UniProtKB/TrEMBL:Q52V12" FT /protein_id="AAX07262.1" FT /translation="MCIRQLKSYIQNMEGLSRRSRIRSTITTLLSAGVNFADESSDNGF FT DRGMYLRTLFGYIALVGTSRKAEHYGEVDIIGNKFSKSSADARGKINIRECVRKMQSFA FT SVVPDGECRGATLRQLCEPFAKEARDCLVILNSWGEQSQLAKKMTKSGHKEPQVMFDFN FT AGLSLSDLSDEEAAVIQSLNSRLFRSEGAKKVFTAQSSIGEQAVEI" FT CDS 3477..3812 FT /codon_start=1 FT /product="RNA binding protein" FT /note="p13" FT /db_xref="UniProtKB/TrEMBL:Q52V11" FT /protein_id="AAX07263.1" FT /translation="MDDPSLLSGRSTYAKRRRKNRLNVCRCGAIMHNNDNCRSKVGSLV FT KMNRLEFVQKGRVVIEDETTSGALPGLVASTYHWIKFNIPEKVNKGANAPRHPSRSPEE FT TPEYYVW" FT 3'UTR 3813..3897 XX SQ Sequence 3897 BP; 1209 A; 732 C; 1076 G; 880 T; 0 other; gccggtgatc cctacctgaa aggcttacta tcattgcttg aggacataga agaggtagaa 60 ccagaggtcc ctgaaaccac agtactacaa ccggagagga cacacctcta tcttagcgcg 120 ggatcgaacg aagtatctgt gagcgaattg tgtgaaaaga tgaacaggga ggtgcacact 180 gaagccggtc tgactgatca gatagatgag gttggttaca agggtgagag cgcgaaccca 240 atgacccaca aagcactata cctccaccac aaaaatgacg acgtggccac cttcatgctg 300 tcggtaaaga aaaggttgag gttcagggat gcagagaaga acagcagaaa gtatgagaag 360 aacaaaggtt tcggaaaaca gatgttcaaa atactccagc agacttacaa cttggtgcac 420 ccaaatagct taccggaact ggataggtgt gaggctgagt tcactagaaa gaggatagca 480 aaatcaagga acctaataga gaagcacagt tatagaagtg atccagactg gccaagcaat 540 tacctcaaga tcttcctcaa acagcaggtg tgcacaaaga tggaaaaacg aggggtagac 600 gcaaaggctg gtcaaaccat agcctgcttc tcacatgctg tgctatgtag attcggaccc 660 caactaagga gaactgaaaa ggcgttaaga gcacagctag gtgacaatgt gatgatatac 720 tcccaaaaga actacactga tctggataat tggtcaaggc tgtatgttga tggaatgatt 780 ggaacagatt ccgattacga ggcattcgac agatcacagg acgagaagat attgagcttt 840 gaggtagagg tgttgaaatt cttcctttgg cccgaagaat taatcaatga gtatgtgacc 900 cttaaattga tgatgggttg cagtatgggt gatttggcca ttatgaggtt ctccggtgag 960 tttggcacat tcttcttcaa cactatatgc aacatggtgt tcacttgcat gcgttactgc 1020 ataacaaagg atacccctat ttgttacgcg ggagacgata tgtacgcacc tggtgtgctt 1080 caagtgaaga gcgattacga gcatgtgtta aaggagttgc aactcaaagc caaagttcaa 1140 gtgtcgactt caccactgtt ctgcgggtgg cgcatgactc catacggcat agtgaaggat 1200 cctaatctgc tcctggatag atggaagatg gcaaaaaggg atgggaagtt ggatttatgc 1260 atgatcaact atgcactgga ggcagtctat ggatacaggt taggtgagca tctctacgac 1320 gttaatattg atattgatgc gcagcaagag ttggtcagag agatagtgaa ggtgaaagat 1380 aagttaccga agaacgtgag caagcaattc agtaaagacc caaacgagtg cttctctgac 1440 ggggaagaat tggatttgcg ggtaagccct gagggtacgt tccagggtga acaagaagtt 1500 tagggcgaat agaggtagtc catgtcccgg gactatttca aggaatttat agggacaggt 1560 cccggaaaat ccaaaagtga agaggtagga gtagagggga aaccaaccac tgagcttgga 1620 gaggtctgta gagtactagt agagaatggt gtaggtttag ggcactttaa gtcaaaccct 1680 gtagcgatca ataaatccaa acaactgagg agattgggcg tgttggtatt agaactgaac 1740 gggtataacg aatccacctt cttgaaccgt ttggaagaaa ggagaagaga gatatcaagg 1800 acccccagtg agtgttcggt gggtgaggaa aagggagtaa gggagcggaa gattagcctt 1860 gtgaacctct gtaaagagat ctgcacgacc ggcgtgaaag gtgaaccaga gctagaatta 1920 caaggggatc aacttcgaat cttacttagt tggaaccgca cagagtactc gtgggacaac 1980 aatgagttca ggccactcgg tttcagaact tatgccttcg aacaggatcg gttacggcaa 2040 tacaaatgga gcctacacgg gctcaatgcg tttccaaacg cccatggaag aatcaccgaa 2100 atcagcggtt caggtcttcg agacaggcaa aggagtggag gatgtctctg agcttaagag 2160 caaactcaaa aggagaaagg tgtacaacat gaggttcctc gaagacttgt ggcccacaca 2220 ggtgttcaag agtgtggtgc acaatgagat cagggttgag gacggcaaag tcgatctgga 2280 tgtgaatctg attgaccaag atatggttaa aaatctggat cctaacgtca aaccttatat 2340 ccacctagga tgtatagcca tagctgtcat accccacggc agggatgcac ccggagaatg 2400 tgagtttgaa ctagtggaca ccaggtatag ctcagatcat ggctccctgg caaggtttgg 2460 ttgtaagatg gcaaacagtc tgagtgcatt cgcgaggttc ccggggtact tcataagctc 2520 gcatgacatc aaggacggtt acaccattgg attaagggtt caaggaaaga acctagagct 2580 taatggaggt gttagaccga tgtccattca ggtcatctgc atattcaaaa tatgtgggga 2640 agagttcaaa caccgttacg cactaggaaa actccctggt aatgcgtatc aagatctact 2700 gaatgcctac ctgattgcca ccgaagatga cacggagttt gaggcccact ctaaggtcgc 2760 caaactgaaa gggaagacgg cagaggccaa aatggtgcaa cctgaaagat gcaacaccaa 2820 ggaagaggat acactggtta tgtcagatgt gtataagaca attaaagagc tatatccaga 2880 acatggaggg tttatcgagg agaagtcgga tcaggtcaac gataacgacc ttactcagcg 2940 cgggggtcaa cttcgcggac gagagctctg ataatgggtt tgataggggc atgtaccttc 3000 gtacgctttt cgggtacata gccttagtcg gaacttcaag aaaagccgag cactatggtg 3060 aggtagatat tataggtaat aagttcagca aatctagcgc tgacgctaga ggtaaaatca 3120 acattagaga gtgtgttagg aaaatgcaga gtttcgctag cgtggtaccg gatggggagt 3180 gtagaggggc aacgctccgg caactgtgtg aacctttcgc taaagaggcg agggattgtc 3240 tggtgatcct gaactcttgg ggtgaacaat cacaactggc caagaaaatg acgaagagtg 3300 gtcacaaaga gcctcaggtg atgtttgact ttaatgccgg attaagtctg agcgatctat 3360 ctgatgaaga agctgcagtg atacaatcac tgaactctag actctttcgt agtgaaggcg 3420 caaagaaggt tttcacagcc cagagcagca tcggagaaca ggctgtcgaa atatagatgg 3480 atgacccatc gttattgtca ggcaggtcca cgtatgcgaa acggcgtagg aaaaataggt 3540 taaatgtgtg tcggtgtggt gcgattatgc ataataatga taattgtaga tctaaggtag 3600 gatcactggt gaaaatgaac aggttggagt tcgtgcagaa gggaagagta gtcattgaag 3660 acgagactac ttctggcgca ctcccgggat tagtggccag tacttaccac tggatcaagt 3720 ttaatatacc tgaaaaggtg aataagggtg ccaatgcccc caggcatcca agtaggagtc 3780 cggaggaaac tccagagtac tacgtgtggt gaggggatat aaaataatag ttaataataa 3840 ctactgcgtt agtgtgtgga acttaatcga atagcgagca gtataatcca agggatg 3897 //