ID   AY873918; SV 1; linear; genomic RNA; STD; VRL; 1991 BP.
XX
AC   AY873918;
XX
DT   01-FEB-2005 (Rel. 82, Created)
DT   16-SEP-2006 (Rel. 89, Last updated, Version 4)
XX
DE   Blackberry yellow vein virus isolate Chickasaw-Arkansas A p4, p62, and p6
DE   genes, complete cds.
XX
KW   .
XX
OS   Blackberry yellow vein-associated virus
OC   Viruses; Riboviria; Closteroviridae; Crinivirus.
XX
RN   [1]
RP   1-1991
RX   DOI; 10.1111/j.1365-3059.2006.01407.x.
RX   AGRICOLA; IND43835981.
RA   Susaimuthu J., Tzanetakis I.E., Gergerich R.C., Martin R.R.;
RT   "Yellow vein-affected blackberries and the presence of a novel Crinivirus";
RL   Plant Pathol. 55(5):607-613(2006).
XX
RN   [2]
RP   1-1991
RA   Tzanetakis I.E.;
RT   ;
RL   Submitted (02-JAN-2005) to the INSDC.
RL   Dept. of Botany and Plant Pathology, Oregon State University and USDA-ARS,
RL   3420 Orchard Ave, Corvallis, OR 97330, USA
XX
DR   MD5; e6015bc8f18c04c139bbdb520d63d7c1.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1991
FT                   /organism="Blackberry yellow vein-associated virus"
FT                   /segment="RNA 2"
FT                   /isolate="Chickasaw-Arkansas A"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:404196"
FT   CDS             1..108
FT                   /codon_start=1
FT                   /product="p4"
FT                   /note="ORF2"
FT                   /db_xref="UniProtKB/TrEMBL:Q5FYY2"
FT                   /protein_id="AAW67731.1"
FT                   /translation="MVWFIYLLLLLVVFIFFPCQSKSGYVVRSGRFSSD"
FT   misc_feature    4..57
FT                   /note="Region: putative transmembrane domain"
FT   CDS             153..1820
FT                   /codon_start=1
FT                   /product="p62"
FT                   /note="ORF3; HSP70h"
FT                   /db_xref="GOA:Q5FYY1"
FT                   /db_xref="InterPro:IPR013126"
FT                   /db_xref="InterPro:IPR018181"
FT                   /db_xref="InterPro:IPR029047"
FT                   /db_xref="UniProtKB/TrEMBL:Q5FYY1"
FT                   /protein_id="AAW67732.1"
FT                   /translation="MTEAKAGLDFGTTFSTISTFTGGVMRVLLLNNSPYIPTCLSISDS
FT                   GDVIIGGAAQVIDRSEVKTCYFYDLKRWVGVDRTNYEVLKRKIRPQYVTELRGNDVYIT
FT                   GVDRGFSCTYTVKQLILLFIDTMVRFFSKTDNLKITSLNVSVPADYKCKQRMFMRSVCN
FT                   SLGFSLRRIINEPSAAAIYSVSKYPNHNFFIMYDFGGGTFDTSLITRDGVYVTVTDTEG
FT                   DSFLGGRDIDNEISNYIMRSNSLSRPLTSDFLASIKEECNILGKSNFNAMDVDNKIVTV
FT                   SFTPDDLAACVSPYSVRSIKILDNLIRRRNISTGAIFLVGGSSLLKKVQSDVSDYAKSR
FT                   GLSVIIDKDLRNSVSFGCSMQHAQEDSGSMVYIDCNSHPLMDLGLFGNPRIIVRKPMSI
FT                   PYTKTESREISRHYSTSINVYEGSDLFVLNNDWLMSASMATRDYAQVGETIQVSYKYNI
FT                   DGILEIYIKNEKTGVEKLLPNTFTLTESIDKLNLNLTQLSNVDEAATLISILVYYRPEL
FT                   SRLLKYLKTPSVFEKAVQEVGSLRELFTSLQLLNKNFL"
FT   CDS             1830..1991
FT                   /codon_start=1
FT                   /product="p6"
FT                   /note="ORF4"
FT                   /db_xref="UniProtKB/TrEMBL:Q5ICV2"
FT                   /protein_id="AAW67733.1"
FT                   /translation="MLVQFFFTNDIGVTIYYLSDNKNFEGEIFTVTSSDQSLLLDLLVV
FT                   FPYLRERW"
XX
SQ   Sequence 1991 BP; 538 A; 348 C; 427 G; 678 T; 0 other;
     atggtttggt ttatctactt acttctcctt ttagtagtgt ttattttctt tccttgtcag        60
     tctaagagtg gttacgtagt tcgtagcgga aggttttctt cagattaagt tttcctttct       120
     ttttggttgc gttctttttt ctctttccaa taatgaccga agctaaggct ggtcttgatt       180
     ttggtactac tttcagcacc atcagcacct ttactggtgg tgttatgaga gtcctacttt       240
     tgaataactc accctacatc ccgacttgtc tatccatatc agatagtggt gatgtgatta       300
     taggaggagc tgctcaagtc attgatagaa gcgaggttaa gacctgctac ttctatgatt       360
     tgaaaagatg ggttggagtg gacaggacga actatgaggt cctcaagagg aagattagac       420
     ctcagtatgt taccgagctt agaggtaacg atgtgtatat aacgggtgta gatagaggtt       480
     tttcttgcac atatacagtt aaacaattga ttcttttatt cattgatact atggtaagat       540
     tcttttcaaa aacggataat ttgaaaataa ctagtctcaa tgtgtcagtt ccggctgatt       600
     acaaatgtaa gcagagaatg tttatgcgat cggtgtgtaa ctcattgggt ttctcacttc       660
     gcaggatcat aaatgaacca tctgctgctg ctatatactc cgtctctaag taccctaatc       720
     acaatttttt cattatgtat gactttggag gaggtacttt tgatacttca ttgatcacta       780
     gagatggtgt ctatgtgact gtgactgaca ctgaaggaga ctcgtttctt ggtggtagag       840
     atatagataa tgagatatct aattatatta tgcggtccaa ttctttgtct agaccattga       900
     catctgactt cctagcctca atcaaggagg aatgtaatat cttaggtaag tcgaatttca       960
     atgctatgga tgttgacaat aagatagtca cggttagttt tacacctgat gatttggctg      1020
     cttgcgtcag cccttatagt gttaggagca ttaagatttt agataatttg attaggaggc      1080
     gcaatatttc aaccggcgct atttttcttg tcggtggatc ttccctctta aagaaggtgc      1140
     agagtgacgt ttccgattat gccaagtcga ggggtcttag tgtcattatt gataaagatc      1200
     tgagaaactc ggtgtctttt ggttgttcca tgcagcatgc tcaagaagat tcagggtcca      1260
     tggtttacat agattgcaat tctcaccctc tcatggactt aggtctgttt ggtaatccta      1320
     ggataattgt caggaaaccc atgtcgatac cttacactaa gactgaatct agagagatta      1380
     gtagacacta ttccacctcg atcaatgtct acgagggctc agatttgttt gtactcaaca      1440
     acgactggct catgagtgcg agtatggcta cacgggatta tgcacaggtt ggggagacca      1500
     ttcaagtttc ttataagtat aatatagatg gtatcctaga gatatacata aagaatgaaa      1560
     agactggtgt tgagaaactc cttccgaaca ccttcacttt gacggagagt atagacaagt      1620
     tgaatctaaa cttgactcag ttatctaatg tcgatgaggc agccacgctg atttctattc      1680
     tcgtatacta cagacctgaa ctttcacggt tgttgaagta tttaaaaact ccatctgtct      1740
     ttgagaaagc ggtgcaggaa gtcggaagtt taagagagtt atttacgagt ctgcaacttt      1800
     tgaataaaaa cttcctttga gtctatgtta tgttagttca gtttttcttt actaacgaca      1860
     taggtgttac catctattat ctatctgata ataaaaattt tgaaggggag attttcactg      1920
     ttacatcatc cgatcaatcc ctacttctcg atcttttggt ggtttttccc tatttgcgag      1980
     agagatggta g                                                           1991
//