ID AY871098; SV 2; linear; genomic RNA; STD; VRL; 3057 BP. XX AC AY871098; XX DT 09-MAR-2005 (Rel. 83, Created) DT 24-MAY-2007 (Rel. 91, Last updated, Version 4) XX DE Groundnut bud necrosis virus non-structural protein (NSs) and nucleocapsid DE protein (N) genes, complete cds. XX KW . XX OS Groundnut bud necrosis virus OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; Tospoviridae; Orthotospovirus. XX RN [1] RP 1-3057 RX DOI; 10.1007/s00705-007-0949-6. RX PUBMED; 17385071. RA Saritha R.K., Jain R.K.; RT "Nucleotide sequence of the S and M RNA segments of a Groundnut bud RT necrosis virus isolate from Vigna radiata in India"; RL Arch. Virol. 152(6):1195-1200(2007). XX RN [2] RP 1-3057 RA Saritha R.K., Jain R.K., Bag S.; RT ; RL Submitted (28-DEC-2004) to the INSDC. RL Plant Pathology, IARI, Pusa Campus, New Delhi, Delhi 110012, India XX RN [3] RC Sequence update by submitter RP 1-3057 RA Saritha R.K., Jain R.K.; RT ; RL Submitted (19-DEC-2005) to the INSDC. RL Plant Pathology, IARI, Pusa Campus, New Delhi, Delhi 110012, India XX DR MD5; 125a0f0963a9727dabb597afaf0d4368. XX CC On Dec 19, 2005 this sequence version replaced gi:60459955. XX FH Key Location/Qualifiers FH FT source 1..3057 FT /organism="Groundnut bud necrosis virus" FT /isolate="mungbean" FT /mol_type="genomic RNA" FT /country="India:New Delhi" FT /db_xref="taxon:198612" FT gene 67..1386 FT /gene="NSs" FT CDS 67..1386 FT /codon_start=1 FT /gene="NSs" FT /product="non-structural protein" FT /db_xref="InterPro:IPR004915" FT /db_xref="UniProtKB/TrEMBL:Q2THX2" FT /protein_id="ABC41635.1" FT /translation="MSTARSAASEFVKSYGTSDNRAINDCYSVFSGEGINFLNLFMHNN FT AGIKSAFSINDLGRNEDIKIHEAEVIDSCHDYHYFEKFGLDIIFCEHEMSLVVRKPGVK FT NTGCKFTMHNQIFNPNSDTLALTPGTVSENEFYEKSKIRSNGLLPSGWYQDECCKNNFY FT IATNGDLTLDYGFSVMGKTTSYWRESISREKILSVKQKCLPDSTVPTNRLLSTSTVKGI FT QLGSELAPDTTVILSLKQNLNVDLKSQYRVSFHGIQEEGAFARTFCVPFENKSRMICLY FT AKTVVDNSNERTTLIIKVVTKTIESHLVIPIRNHINCVKKIGARIGLVDSVESDPNYNQ FT MIVKELLGVYTQFAINLSLVIKKPIIVFKMYDIELNNNHIDVYGRILNYQTDAEGNAYF FT LSKTLEVLPKSLSTLSYLGSIAPIQWEESLEYQHFIVKPE" FT gene complement(2160..2990) FT /gene="N" FT CDS complement(2160..2990) FT /codon_start=1 FT /gene="N" FT /product="nucleocapsid protein" FT /db_xref="GOA:Q5BU40" FT /db_xref="InterPro:IPR002517" FT /db_xref="UniProtKB/TrEMBL:Q5BU40" FT /protein_id="AAX20149.1" FT /translation="MSNVKQLTEKKIKELLAGGSADVEIETEDSTPGFSFKAFYDANKT FT LEITFTNCLNILKCRKQIFAACKSGKYVFCGKTIVATNTDVGPDDWTFKRTEAFIRTKM FT ASMVEKSKNDAAKQEMYNKIMELPLVAAYGLNVPASFDTCALRMMLCIGGPLPLLSSMT FT GLAPIIFPLAYYQNVKKEKLGIKNFSTYEQVCKVAKVLSASQIEFKNELEVMFKSAVKL FT LSESNPGTASSISLKKYDEQVKYMDKAFSASLSMDDYGEHSKKKSSKAGPSLEL" XX SQ Sequence 3057 BP; 1012 A; 539 C; 516 G; 990 T; 0 other; agagcaatcg gggcatctaa taattctaga aaaacaacga tatactcaag aaatactatt 60 tcaggcatgt cgaccgcaag gagtgctgct tctgaattcg tcaaaagcta tggcacaagt 120 gacaacagag caatcaatga ttgctattct gtcttctctg gagaaggtat caactttctc 180 aatttgttca tgcataacaa tgcaggtatt aaatctgcat tcagcatcaa cgatttgggc 240 aggaatgagg atatcaaaat ccatgaagct gaagttattg attcatgcca tgattatcat 300 tactttgaga agtttggatt agacataata ttctgtgagc atgaaatgag cctggttgtg 360 aggaaaccag gtgtgaagaa tacaggctgc aaattcacaa tgcacaacca aattttcaat 420 cctaattctg atacacttgc tttaactcct ggaacagtct cagaaaatga gttctatgaa 480 aaaagcaaaa taagatcaaa tggactactt ccctccggat ggtatcaaga tgaatgctgt 540 aaaaacaact tttacatagc tacaaatgga gatttgactc tcgactatgg gttttctgtt 600 atgggaaaga caacatccta ctggagagaa agtatctcta gggagaagat tttgtctgtt 660 aagcaaaagt gtttacctga tagtactgtc cctaccaaca ggctcctatc tacatcaact 720 gtaaaaggta ttcagctagg atccgaacta gccccagaca ccacagtgat actatcactt 780 aagcaaaatc tgaacgttga cttaaaatct caataccgcg tttcgtttca tggcatccaa 840 gaggagggtg cttttgcaag gactttctgt gttccttttg aaaacaaatc caggatgata 900 tgtctatacg caaaaactgt tgtggataac agtaatgaaa ggactactct gattataaag 960 gtagttacaa aaactattga atctcatcta gtcattccta tcaggaatca cataaattgt 1020 gtaaagaaaa ttggagccag gatagggctt gttgattctg ttgaaagtga tcctaactat 1080 aatcagatga ttgttaaaga gttgttgggt gtttatactc aatttgctat caatttatct 1140 ttggtcataa agaagccgat cattgtgttc aaaatgtatg acattgaatt gaacaacaat 1200 catatagacg tttatggcag gatcctgaat taccagacag atgcagaagg aaatgcctat 1260 ttcctttcaa aaacccttga agttcttcct aaatcacttt ccactctgag ttacttagga 1320 agcattgcac caattcagtg ggaggaatct ttggagtacc agcatttcat tgtgaagcca 1380 gagtaattca ggtttatgtc cttgttctac ttaaggttat tgtgcgcatg ttatctaata 1440 agcagctaat aagtgtttgc ttgtctaaag tatataagta ttttaagtat tacagtataa 1500 tgttatcaaa tataagttta tataaataaa ataatctaat actaataagt gtaagtttaa 1560 taatcaaata taaattaaat aaataaaaac ccataaaaat caaaaaatga aaaaccaaaa 1620 agacctcgaa agaggcaatc ttggcttaac tgctttaatt aaatgtattt atcaaaagct 1680 ttttaacttg gaattcatgt ttcatggaat ttaagatctt tcgagtattt taatctcatt 1740 tatcaactta tatgatttaa tcaacatgag gaactatact gaatttagat cccttaagta 1800 ctgcgagtta atccgaacta gataatcagt tccggaaata aagcaaattt atgttcaaga 1860 ccggccaata ggttgcctcc gaagaggtct tttttgattt tttgattttt tgattttttt 1920 gggtttttgt tatttattta ttttacttat taattattat ttggtttatt tattatctta 1980 ctcttatatt tattttaaac acaaacacaa taacacaaca agtaaagtaa catttaaatt 2040 taatacataa tataaacaca cagagaactt ataaacacac aaaagagctt atattactta 2100 acaaccacac ataaacttag gtacatatta acatgcataa acaccttata tgaaacaatt 2160 tacaattcca gcgaaggacc agcctttgaa ctctttttct tagaatgttc accataatca 2220 tccattgaga gactggcact gaaagctttg tccatatatt tgacttgttc atcatatttc 2280 ttgagtgaga tagagctggc tgttccaggg ttgctctcac tcaatagctt tacagctgat 2340 ttaaacatta cctctagttc atttttaaat tcaatctgtg aagcagaaag tactttggct 2400 actttgcaaa cctgttcata agtagaaaag ttcttaattc ctaatttctc tttcttcaca 2460 ttttgataat aagccagagg gaatataatt ggtgccagac ctgtcatgct agacaagaga 2520 ggcagaggac ctccaatgca gagcatcatc cttaaagcac atgtatcaaa agatgcaggg 2580 acatttaatc cataagctgc tactaatggt aattccatta ttttattgta catctcctgc 2640 ttagcagcat cattcttgct cttttcaacc atactagcca ttttagtcct gatgaaagct 2700 tctgtccttt tgaaggtcca gtcatctggc cctacgtcag tatttgtagc aacaatagtt 2760 ttaccacaaa aaacatactt accactcttg caagcagcaa agatctgctt cctgcacttc 2820 agaatattca aacaatttgt gaaagttatt tcaagagttt tgttagcgtc ataaaaagct 2880 ttaaagctaa atccgggagt ggaatcttct gtttcaattt caacatctgc agagccacca 2940 gccaaaagtt ctttgatttt tttctcggtg agttgcttga cgttagacat ggtgtttact 3000 ctggaaacgt ctagtatatt gactttgaat gaattttatt agcgcctcga ttgctct 3057 //